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The map label for this gene is fdhD [H]

Identifier: 119945787

GI number: 119945787

Start: 2586744

End: 2587703

Strand: Reverse

Name: fdhD [H]

Synonym: Ping_2123

Alternate gene names: 119945787

Gene position: 2587703-2586744 (Counterclockwise)

Preceding gene: 119945788

Following gene: 119945786

Centisome position: 56.75

GC content: 41.56

Gene sequence:

>960_bases
ATGGCTGAGCAGAAAGTAAATCAGGAAGATGATTGGTTAGGTCATAAAGATTCAGCTTTTAAGGTTAATTTTGATCAAAA
TAGTCAGCAACTATATCAATCAAGCTTAAATACTCCGAGTGTCGTGACATGTTCACGTCAGAAGATAAATGGCACACAAG
TAAGCCTTTCTATTGATTCCGTGATTGTCGAAGAACCCCTACAGATTAGCTTGATTTATAGCGACAGATTGGGCCATGAA
CAAGAGCGTATTTACTTAGTGACAATGCGCACACCGGGTGACGACCTTAATCTGGTGACTGGGTTATTGTTGGCCGAAGG
TATTATAAAAAAAGCCCGCGACATTACAGGTATCAATGATCAACTAGATACCGATGAAATCTTCCGCAATAAAATAAATG
TGCACTTATCAGCGAATGTGGTTGTTGACTGGGCATTAATCAATAGAGATACAACCTCATTCTCCAGTTGCGGAGTGTGT
GGTAAATCATCAATACAGTCTTTAGAGCTACGTGATATTCCCGCTTTAGACACGGCGGAACACTGGTTGTCGGGTCATAT
TATTCCTTATTTCGGCGATCAATTGCGTCAATCTCAAGCGATGTTTATGCAAACGGGCGGGGTGCATGGCTGCGGCTTAT
TCGATGCTAAAGGCGCTTTATTATTGAGCTGCGAAGATGTCGGGCGTCATAACGCTTTAGATAAATTGATCGGTAAATTA
GCAAGAAGCGCAACGCTTGATCAGCAAAAAAAAATTGTATTCCTAAGCGGTCGTATCAGTTTTGAGTTGGTTCAGAAAGT
GCTTGTTGCTGGCATTTCTGTACTGGTCGCTGTCGGGGCACCATCAAATCTCGCTATCAATATAGCAAAACGTTTCAATT
TAACACTTATCGGCTTTAGTCGTAATGGCGGATTTAATATCTACCATGGTGCTTTCCGTTTAAATCTGACCACCGAATAG

Upstream 100 bases:

>100_bases
TTTTTTGAATACAGTCTTTTTGAATGTAAAAAATGTCGGGAAAAGGCTGCGGAGATCATATCCGTTTTTGAAGTCAACCC
GTTGGGAGTGAAGTAAGTTT

Downstream 100 bases:

>100_bases
AGAATTAAAATGACAGTTAAAAAATATAAAGGATCGGCTGGTGGCTGGGGTGCTTTATTAAGTACCAGCAAACATCTGGT
GAAAAGTGAAAATATTGCAC

Product: formate dehydrogenase, subunit FdhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MAEQKVNQEDDWLGHKDSAFKVNFDQNSQQLYQSSLNTPSVVTCSRQKINGTQVSLSIDSVIVEEPLQISLIYSDRLGHE
QERIYLVTMRTPGDDLNLVTGLLLAEGIIKKARDITGINDQLDTDEIFRNKINVHLSANVVVDWALINRDTTSFSSCGVC
GKSSIQSLELRDIPALDTAEHWLSGHIIPYFGDQLRQSQAMFMQTGGVHGCGLFDAKGALLLSCEDVGRHNALDKLIGKL
ARSATLDQQKKIVFLSGRISFELVQKVLVAGISVLVAVGAPSNLAINIAKRFNLTLIGFSRNGGFNIYHGAFRLNLTTE

Sequences:

>Translated_319_residues
MAEQKVNQEDDWLGHKDSAFKVNFDQNSQQLYQSSLNTPSVVTCSRQKINGTQVSLSIDSVIVEEPLQISLIYSDRLGHE
QERIYLVTMRTPGDDLNLVTGLLLAEGIIKKARDITGINDQLDTDEIFRNKINVHLSANVVVDWALINRDTTSFSSCGVC
GKSSIQSLELRDIPALDTAEHWLSGHIIPYFGDQLRQSQAMFMQTGGVHGCGLFDAKGALLLSCEDVGRHNALDKLIGKL
ARSATLDQQKKIVFLSGRISFELVQKVLVAGISVLVAVGAPSNLAINIAKRFNLTLIGFSRNGGFNIYHGAFRLNLTTE
>Mature_318_residues
AEQKVNQEDDWLGHKDSAFKVNFDQNSQQLYQSSLNTPSVVTCSRQKINGTQVSLSIDSVIVEEPLQISLIYSDRLGHEQ
ERIYLVTMRTPGDDLNLVTGLLLAEGIIKKARDITGINDQLDTDEIFRNKINVHLSANVVVDWALINRDTTSFSSCGVCG
KSSIQSLELRDIPALDTAEHWLSGHIIPYFGDQLRQSQAMFMQTGGVHGCGLFDAKGALLLSCEDVGRHNALDKLIGKLA
RSATLDQQKKIVFLSGRISFELVQKVLVAGISVLVAVGAPSNLAINIAKRFNLTLIGFSRNGGFNIYHGAFRLNLTTE

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=258, Percent_Identity=30.2325581395349, Blast_Score=107, Evalue=9e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 35101; Mature: 34970

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00041 HTH_ARAC_FAMILY_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEQKVNQEDDWLGHKDSAFKVNFDQNSQQLYQSSLNTPSVVTCSRQKINGTQVSLSIDS
CCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCEEEECCCCCCCEEEEEEECC
VIVEEPLQISLIYSDRLGHEQERIYLVTMRTPGDDLNLVTGLLLAEGIIKKARDITGIND
EEECCCEEEEEEEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
QLDTDEIFRNKINVHLSANVVVDWALINRDTTSFSSCGVCGKSSIQSLELRDIPALDTAE
CCCHHHHHHCEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHH
HWLSGHIIPYFGDQLRQSQAMFMQTGGVHGCGLFDAKGALLLSCEDVGRHNALDKLIGKL
HHHCCCCCHHCCHHHHHHHHHHHHCCCCCCCEEECCCCEEEEEEHHCCCHHHHHHHHHHH
ARSATLDQQKKIVFLSGRISFELVQKVLVAGISVLVAVGAPSNLAINIAKRFNLTLIGFS
HHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHEEEEECCCCCEEEEEEEEEEEEEEEEE
RNGGFNIYHGAFRLNLTTE
CCCCCEEEEEEEEEEEECC
>Mature Secondary Structure 
AEQKVNQEDDWLGHKDSAFKVNFDQNSQQLYQSSLNTPSVVTCSRQKINGTQVSLSIDS
CCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCEEEECCCCCCCEEEEEEECC
VIVEEPLQISLIYSDRLGHEQERIYLVTMRTPGDDLNLVTGLLLAEGIIKKARDITGIND
EEECCCEEEEEEEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
QLDTDEIFRNKINVHLSANVVVDWALINRDTTSFSSCGVCGKSSIQSLELRDIPALDTAE
CCCHHHHHHCEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHH
HWLSGHIIPYFGDQLRQSQAMFMQTGGVHGCGLFDAKGALLLSCEDVGRHNALDKLIGKL
HHHCCCCCHHCCHHHHHHHHHHHHCCCCCCCEEECCCCEEEEEEHHCCCHHHHHHHHHHH
ARSATLDQQKKIVFLSGRISFELVQKVLVAGISVLVAVGAPSNLAINIAKRFNLTLIGFS
HHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHEEEEECCCCCEEEEEEEEEEEEEEEEE
RNGGFNIYHGAFRLNLTTE
CCCCCEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572948; 12692562 [H]