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The map label for this gene is ydeP [H]

Identifier: 119945786

GI number: 119945786

Start: 2584419

End: 2586734

Strand: Reverse

Name: ydeP [H]

Synonym: Ping_2122

Alternate gene names: 119945786

Gene position: 2586734-2584419 (Counterclockwise)

Preceding gene: 119945787

Following gene: 119945783

Centisome position: 56.73

GC content: 44.73

Gene sequence:

>2316_bases
ATGACAGTTAAAAAATATAAAGGATCGGCTGGTGGCTGGGGTGCTTTATTAAGTACCAGCAAACATCTGGTGAAAAGTGA
AAATATTGCACATAACATTCTAAACTTACTAAAAACAAACCAGGACAAAGGGTTTGATTGCCCCGGTTGTGCATGGGGCG
AATCGACAGAAAAAAGTCGCTTTAGGTTTTGTGAGAATGGTGCAAAAGCCGTTAATTGGGAAGCTACAAGCCGCCGTGTT
ACGCCTGAATTTTTTCAACAGCACCCCGTAAGTTGGTTAACCCAGCAAAGTGATTATTTTTTAGAGTCTCAGGGCAGGTT
GAGTCATCCTGTTCAGTACAATTGTGAAACTGACTGCTATCAAGCGGTTAGTTGGCAGCACGCTTTTACGCTGATAGCCA
AGCACTTAAATGCACTTGAGTCCCCTAATCAGGCAGAATTTTATACCTCGGGTCGAGCGAGCAATGAAGCGGCATTTTTA
TATCAACTTTTTGTGCGAAAATTTGGCTCTAATAATTTTCCTGATTGCTCCAATATGTGCCATGAAGCAACCGGGATAGC
CTTAAAACAATCCGTTGGGGTCGGTAAAGGCACGGTCACAATGGCAGACTTTGAAGATGCCGATGCTATTTTTGTTTTTG
GTCAAAATCCGGGAACAAACCATCCTCGTATGTTAGATACGCTGCGCCAGGCATCACGTCGAGGGGCCGCTATTGTCACT
TTTAATACCTTAAAAGAGCGAGGCTTAGAACGTTTTACTAATCCTCAATCTGTGACAGAAATGCTCACCAATGGCTCGAC
ACAAATTAGTCAGTGCTATTTCAGGCCTAAACTCGGCGGCGATATGGCCGTTGTACGCGGCATGGTTAAAGCCCTTTTTG
TGATTGAAAAAGCACAGTTGGCTGCCGGGTGCTCGCCTATATTTGATCATGACTTTATTGAAGAACACACTCAAGGGATT
GAGCAATACTTAAAAGCGGTTGAAGCGACACCGTGGAATGAGATAACCGAACAGGCTGGCTTATCACAATCTGAAATAGA
AGAAGCCGCCGGTATTTATCGTCAATCCAAGCGGGTGATTATTACCTGGGCGATGGGTATTACTCAGCATAAACATTCGG
TGAAAACCATTCAAGAAATCACCAACCTGCAGTTATTGTTTGGACAGTTAGGGCGGCCAGGTGCGGGGTTGTGTCCGGTG
CGCGGGCACAGTAATGTGCAGGGTGATCGTACTATGGGCATTGACGAAAAACCGAGTGCTGCATTTATCGACAACCTGTC
GCATGCCTTTGATTTTCAGGCTCCTTCAAAACCTGGCCATAATGCGGTTGCGGCTATCAAAGCGATGCTTGCGGGTGAAA
GTAAAGTGTTTATTGCTTTAGGTGGAAATTTTGCGGCCGCAACGCCGGATACATCCTTAACCCAACAAGCACTTTCTAAC
TGCAGCTTGACGGTGAATATCGCGACAAAATTAAACCGTACGCATCTTGTTCTGGGGAAAGATTCACTCATTCTACCTTG
CCTAGGACGTACTGATATTGATATTCAGGTATCAGGCCCGCAAAGCATCACCGTTGAAGACTCTTTTAGTATGGTGCATG
CCTCTGCCGGGGTGGTCGAGAGTGATACCTACGAGATGCGCTCGGAGCCGGCTATTATTGCGGGTATCGCTGCAGCTACT
TTGGGCAAACAGCCCATTGATTGGCCTTGGGTCATTGAAGATTACGCCAGAATCCGCGATTTAATTGCAAAAAGTATTCC
TGGATTTACCGATATGAATACCAAGATAAAACAACCAGGTGGTTTTTATCTTGGTAATAAGGCAGCTGAACGGCAATGGC
AAACGCCCTCTAAAAAAGCACAATTTATGGAGCATGATTTGCCGCTGCATTTACTGCCCGCAAACCTGCGGGAATTAAGT
AAGGATCCGGTGTTCGTCTTACAAACTATGCGTTCACACGATCAGTACAATACCAGCATTTATGGTTTTGATGATCGTTA
CCGCGGTATTTTTGGTGAACGTAAAGTCCTTTTTGTTAATGTGAATGACATCACTGCATTGGGGCTTAAAAACAGTCAAT
TAGTTGATATTGAATCCCTTTGGCCCGATGCTGTTGAACGTAAGGTTTTTGGCTTTAAGCTGGTGGCTTATGATATTCCA
GAGGGCAATATTGCTGCTTATTTTCCTGAAACCAATCCCCTGATGTCCATTGATGGAACGGGAGATCTGAGTGATACGCC
AATTTCGAAAGCGATTCCGGTTGTTTTAACCGCGACGCTATTGAAGAGTGACAAAATTGACGTTGTTATGACTTAA

Upstream 100 bases:

>100_bases
ACGTTTCAATTTAACACTTATCGGCTTTAGTCGTAATGGCGGATTTAATATCTACCATGGTGCTTTCCGTTTAAATCTGA
CCACCGAATAGAGAATTAAA

Downstream 100 bases:

>100_bases
CTTAACTTATTGTTTTAGCATCAAAAAGGGCTGATCACTAAGCCATTCTTATTAGCAAACTTTAGGTTAAGGTCAGTTTA
ATTGACTTTAATCGGCCCGG

Product: oxidoreductase alpha (molybdopterin) subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 771; Mature: 770

Protein sequence:

>771_residues
MTVKKYKGSAGGWGALLSTSKHLVKSENIAHNILNLLKTNQDKGFDCPGCAWGESTEKSRFRFCENGAKAVNWEATSRRV
TPEFFQQHPVSWLTQQSDYFLESQGRLSHPVQYNCETDCYQAVSWQHAFTLIAKHLNALESPNQAEFYTSGRASNEAAFL
YQLFVRKFGSNNFPDCSNMCHEATGIALKQSVGVGKGTVTMADFEDADAIFVFGQNPGTNHPRMLDTLRQASRRGAAIVT
FNTLKERGLERFTNPQSVTEMLTNGSTQISQCYFRPKLGGDMAVVRGMVKALFVIEKAQLAAGCSPIFDHDFIEEHTQGI
EQYLKAVEATPWNEITEQAGLSQSEIEEAAGIYRQSKRVIITWAMGITQHKHSVKTIQEITNLQLLFGQLGRPGAGLCPV
RGHSNVQGDRTMGIDEKPSAAFIDNLSHAFDFQAPSKPGHNAVAAIKAMLAGESKVFIALGGNFAAATPDTSLTQQALSN
CSLTVNIATKLNRTHLVLGKDSLILPCLGRTDIDIQVSGPQSITVEDSFSMVHASAGVVESDTYEMRSEPAIIAGIAAAT
LGKQPIDWPWVIEDYARIRDLIAKSIPGFTDMNTKIKQPGGFYLGNKAAERQWQTPSKKAQFMEHDLPLHLLPANLRELS
KDPVFVLQTMRSHDQYNTSIYGFDDRYRGIFGERKVLFVNVNDITALGLKNSQLVDIESLWPDAVERKVFGFKLVAYDIP
EGNIAAYFPETNPLMSIDGTGDLSDTPISKAIPVVLTATLLKSDKIDVVMT

Sequences:

>Translated_771_residues
MTVKKYKGSAGGWGALLSTSKHLVKSENIAHNILNLLKTNQDKGFDCPGCAWGESTEKSRFRFCENGAKAVNWEATSRRV
TPEFFQQHPVSWLTQQSDYFLESQGRLSHPVQYNCETDCYQAVSWQHAFTLIAKHLNALESPNQAEFYTSGRASNEAAFL
YQLFVRKFGSNNFPDCSNMCHEATGIALKQSVGVGKGTVTMADFEDADAIFVFGQNPGTNHPRMLDTLRQASRRGAAIVT
FNTLKERGLERFTNPQSVTEMLTNGSTQISQCYFRPKLGGDMAVVRGMVKALFVIEKAQLAAGCSPIFDHDFIEEHTQGI
EQYLKAVEATPWNEITEQAGLSQSEIEEAAGIYRQSKRVIITWAMGITQHKHSVKTIQEITNLQLLFGQLGRPGAGLCPV
RGHSNVQGDRTMGIDEKPSAAFIDNLSHAFDFQAPSKPGHNAVAAIKAMLAGESKVFIALGGNFAAATPDTSLTQQALSN
CSLTVNIATKLNRTHLVLGKDSLILPCLGRTDIDIQVSGPQSITVEDSFSMVHASAGVVESDTYEMRSEPAIIAGIAAAT
LGKQPIDWPWVIEDYARIRDLIAKSIPGFTDMNTKIKQPGGFYLGNKAAERQWQTPSKKAQFMEHDLPLHLLPANLRELS
KDPVFVLQTMRSHDQYNTSIYGFDDRYRGIFGERKVLFVNVNDITALGLKNSQLVDIESLWPDAVERKVFGFKLVAYDIP
EGNIAAYFPETNPLMSIDGTGDLSDTPISKAIPVVLTATLLKSDKIDVVMT
>Mature_770_residues
TVKKYKGSAGGWGALLSTSKHLVKSENIAHNILNLLKTNQDKGFDCPGCAWGESTEKSRFRFCENGAKAVNWEATSRRVT
PEFFQQHPVSWLTQQSDYFLESQGRLSHPVQYNCETDCYQAVSWQHAFTLIAKHLNALESPNQAEFYTSGRASNEAAFLY
QLFVRKFGSNNFPDCSNMCHEATGIALKQSVGVGKGTVTMADFEDADAIFVFGQNPGTNHPRMLDTLRQASRRGAAIVTF
NTLKERGLERFTNPQSVTEMLTNGSTQISQCYFRPKLGGDMAVVRGMVKALFVIEKAQLAAGCSPIFDHDFIEEHTQGIE
QYLKAVEATPWNEITEQAGLSQSEIEEAAGIYRQSKRVIITWAMGITQHKHSVKTIQEITNLQLLFGQLGRPGAGLCPVR
GHSNVQGDRTMGIDEKPSAAFIDNLSHAFDFQAPSKPGHNAVAAIKAMLAGESKVFIALGGNFAAATPDTSLTQQALSNC
SLTVNIATKLNRTHLVLGKDSLILPCLGRTDIDIQVSGPQSITVEDSFSMVHASAGVVESDTYEMRSEPAIIAGIAAATL
GKQPIDWPWVIEDYARIRDLIAKSIPGFTDMNTKIKQPGGFYLGNKAAERQWQTPSKKAQFMEHDLPLHLLPANLRELSK
DPVFVLQTMRSHDQYNTSIYGFDDRYRGIFGERKVLFVNVNDITALGLKNSQLVDIESLWPDAVERKVFGFKLVAYDIPE
GNIAAYFPETNPLMSIDGTGDLSDTPISKAIPVVLTATLLKSDKIDVVMT

Specific function: Probably involved in acid resistance [H]

COG id: COG0243

COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787778, Length=762, Percent_Identity=46.5879265091864, Blast_Score=755, Evalue=0.0,
Organism=Escherichia coli, GI3868721, Length=394, Percent_Identity=27.4111675126904, Blast_Score=153, Evalue=3e-38,
Organism=Escherichia coli, GI1788534, Length=460, Percent_Identity=23.2608695652174, Blast_Score=82, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR006657
- InterPro:   IPR006656
- InterPro:   IPR010046 [H]

Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]

EC number: NA

Molecular weight: Translated: 84906; Mature: 84775

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVKKYKGSAGGWGALLSTSKHLVKSENIAHNILNLLKTNQDKGFDCPGCAWGESTEKSR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH
FRFCENGAKAVNWEATSRRVTPEFFQQHPVSWLTQQSDYFLESQGRLSHPVQYNCETDCY
HHHHCCCCCEEEECCCCCCCCHHHHHHCCHHHHHCCCCCEECCCCCCCCCEEECCCCHHH
QAVSWQHAFTLIAKHLNALESPNQAEFYTSGRASNEAAFLYQLFVRKFGSNNFPDCSNMC
HHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHH
HEATGIALKQSVGVGKGTVTMADFEDADAIFVFGQNPGTNHPRMLDTLRQASRRGAAIVT
HHHHCCEEECCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEE
FNTLKERGLERFTNPQSVTEMLTNGSTQISQCYFRPKLGGDMAVVRGMVKALFVIEKAQL
EHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHH
AAGCSPIFDHDFIEEHTQGIEQYLKAVEATPWNEITEQAGLSQSEIEEAAGIYRQSKRVI
HCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCEEE
ITWAMGITQHKHSVKTIQEITNLQLLFGQLGRPGAGLCPVRGHSNVQGDRTMGIDEKPSA
EEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
AFIDNLSHAFDFQAPSKPGHNAVAAIKAMLAGESKVFIALGGNFAAATPDTSLTQQALSN
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCEEECCCCHHHHHHHHHC
CSLTVNIATKLNRTHLVLGKDSLILPCLGRTDIDIQVSGPQSITVEDSFSMVHASAGVVE
CEEEEEEEEECCCEEEEECCCCEEEEECCCCCEEEEECCCCEEEEECCHHHHHHCCCCEE
SDTYEMRSEPAIIAGIAAATLGKQPIDWPWVIEDYARIRDLIAKSIPGFTDMNTKIKQPG
CCCHHHCCCCCEEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCC
GFYLGNKAAERQWQTPSKKAQFMEHDLPLHLLPANLRELSKDPVFVLQTMRSHDQYNTSI
CEEECCHHHHHCCCCCHHHHHHHHCCCCEEEECCHHHHCCCCHHHHHHHHHHCCCCCCEE
YGFDDRYRGIFGERKVLFVNVNDITALGLKNSQLVDIESLWPDAVERKVFGFKLVAYDIP
EECCHHHCCCCCCCEEEEEEECCEEEECCCCCCEEEHHHHCHHHHHHHHHEEEEEEEECC
EGNIAAYFPETNPLMSIDGTGDLSDTPISKAIPVVLTATLLKSDKIDVVMT
CCCEEEECCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure 
TVKKYKGSAGGWGALLSTSKHLVKSENIAHNILNLLKTNQDKGFDCPGCAWGESTEKSR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH
FRFCENGAKAVNWEATSRRVTPEFFQQHPVSWLTQQSDYFLESQGRLSHPVQYNCETDCY
HHHHCCCCCEEEECCCCCCCCHHHHHHCCHHHHHCCCCCEECCCCCCCCCEEECCCCHHH
QAVSWQHAFTLIAKHLNALESPNQAEFYTSGRASNEAAFLYQLFVRKFGSNNFPDCSNMC
HHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHH
HEATGIALKQSVGVGKGTVTMADFEDADAIFVFGQNPGTNHPRMLDTLRQASRRGAAIVT
HHHHCCEEECCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEE
FNTLKERGLERFTNPQSVTEMLTNGSTQISQCYFRPKLGGDMAVVRGMVKALFVIEKAQL
EHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHH
AAGCSPIFDHDFIEEHTQGIEQYLKAVEATPWNEITEQAGLSQSEIEEAAGIYRQSKRVI
HCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCEEE
ITWAMGITQHKHSVKTIQEITNLQLLFGQLGRPGAGLCPVRGHSNVQGDRTMGIDEKPSA
EEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
AFIDNLSHAFDFQAPSKPGHNAVAAIKAMLAGESKVFIALGGNFAAATPDTSLTQQALSN
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCEEECCCCHHHHHHHHHC
CSLTVNIATKLNRTHLVLGKDSLILPCLGRTDIDIQVSGPQSITVEDSFSMVHASAGVVE
CEEEEEEEEECCCEEEEECCCCEEEEECCCCCEEEEECCCCEEEEECCHHHHHHCCCCEE
SDTYEMRSEPAIIAGIAAATLGKQPIDWPWVIEDYARIRDLIAKSIPGFTDMNTKIKQPG
CCCHHHCCCCCEEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCC
GFYLGNKAAERQWQTPSKKAQFMEHDLPLHLLPANLRELSKDPVFVLQTMRSHDQYNTSI
CEEECCHHHHHCCCCCHHHHHHHHCCCCEEEECCHHHHCCCCHHHHHHHHHHCCCCCCEE
YGFDDRYRGIFGERKVLFVNVNDITALGLKNSQLVDIESLWPDAVERKVFGFKLVAYDIP
EECCHHHCCCCCCCEEEEEEECCEEEECCCCCCEEEHHHHCHHHHHHHHHEEEEEEEECC
EGNIAAYFPETNPLMSIDGTGDLSDTPISKAIPVVLTATLLKSDKIDVVMT
CCCEEEECCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]