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The map label for this gene is ycjN [C]

Identifier: 119945691

GI number: 119945691

Start: 2442805

End: 2444031

Strand: Reverse

Name: ycjN [C]

Synonym: Ping_2008

Alternate gene names: 119945691

Gene position: 2444031-2442805 (Counterclockwise)

Preceding gene: 119945692

Following gene: 119945689

Centisome position: 53.6

GC content: 42.14

Gene sequence:

>1227_bases
ATGAAATATGTAAAACATATTGCTGCATCGGCAATACTTACCGCAACCCTCGCTACATCGGCTTATGCAAGTACGCTTGT
GATTAACTCTGATGCCTCTGACCCTGCTCCAAAAGAAGCATGGGGTGAGATCATCAGCCGTTTCGAAGTTGAAAATCCGG
ACATAACGGTTAAGTATAATCTCTATGACCATGAATCCTATAAAACAACTATCCGTAACTGGTTGGTCACTTCACCACCC
GATGTGGTTTTCTGGTATGCGGGTAATCGAATGAAAACCTTCGTTGATCGTGGCCTTTTTGAAGATGTCAGTGATATCTG
GGAAAAGAATGACCTTCAGGCTGATTTTACCTCTGCCGCTGCTGCGATGACCGTTGACGGTAAACAATATGGTGTGCCAT
ATACTTATTATCAATGGGGTATGTACTACCGTAAAGATATCTTCCAAAAGTATGATATTGCGGAGCCTAAAACATGGGAC
GAGTTTAAATCAGCTGCGGCAACACTGAAGAAAAATGAAATCGCACCCTTCACTATCGGCACTAAATTCCTATGGACGGC
CGCGGGTTGGTTCGATTACCTTAACTTGCGTACAAATGGTCTAGATTTCCACATTAAATTAATGGAAGGTAAAATTGCTT
ATACCGATCCGCGGGTTAAAAAAACCTTTGAAAATTGGAAAGAGATAGTAGAGCCGGGTTATTACCTGGAAAACCACGCC
GCTTATTCTTGGCAGGAAGCACAACCATTTTTGTATAACGGTCAAGCCGCTATGTACTTGATTGGTAACTTTATTACTCC
AAGCTTCCCGGAAGAGCTTGACGGTAAAATGGGCTTCTTCCAGTTCCCATCTATTGATCCAGCGATTCCAATGGCGGAAG
ATGCACCCATGGATACAATACATATTCCTTCTAAAGCGACCAATAAAGTTGATGCACGTAAGTTCCTTGAGTTTGTTGCA
CGTGCAGAAAATCAGGAACTTATCAACAAAAAAATGTTGCAGATTCCAACCAACAATAAAGCGGCTGTTAAAGATAATGA
GTTCTTAAACACCGGCGTGAAAATGTTGAATGAAGCAGCGGGCACCGCACAATTCTATGATCGTGATACTGATCCTGCGA
TGGCTAAAGCTGGTATGAAAGGATTCCAAGAGTTTATGGTTCACCCTGATCGCCTTGATAAGATACTTGAACAACTAGAA
AAAGTGCGTCAGAGAGTGTTTAAATAA

Upstream 100 bases:

>100_bases
ACCGCAAGGTATGAATATTCATAACATGTTGAGAATAAGCTAACCCGCTTATTTTCATCAAACAACAACGAGCATTTTGC
TCGCCAACAAGGACCTCAAT

Downstream 100 bases:

>100_bases
TCTGTTAGCGCGTTAATTGGTAGTGAGCTTAACGCAGTTTAAGTTCATTACTTCCTTTTACATTCTTTCCTACAGCTCCC
ATCTCATCGCTCTCATCGCT

Product: ABC transporter extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MKYVKHIAASAILTATLATSAYASTLVINSDASDPAPKEAWGEIISRFEVENPDITVKYNLYDHESYKTTIRNWLVTSPP
DVVFWYAGNRMKTFVDRGLFEDVSDIWEKNDLQADFTSAAAAMTVDGKQYGVPYTYYQWGMYYRKDIFQKYDIAEPKTWD
EFKSAAATLKKNEIAPFTIGTKFLWTAAGWFDYLNLRTNGLDFHIKLMEGKIAYTDPRVKKTFENWKEIVEPGYYLENHA
AYSWQEAQPFLYNGQAAMYLIGNFITPSFPEELDGKMGFFQFPSIDPAIPMAEDAPMDTIHIPSKATNKVDARKFLEFVA
RAENQELINKKMLQIPTNNKAAVKDNEFLNTGVKMLNEAAGTAQFYDRDTDPAMAKAGMKGFQEFMVHPDRLDKILEQLE
KVRQRVFK

Sequences:

>Translated_408_residues
MKYVKHIAASAILTATLATSAYASTLVINSDASDPAPKEAWGEIISRFEVENPDITVKYNLYDHESYKTTIRNWLVTSPP
DVVFWYAGNRMKTFVDRGLFEDVSDIWEKNDLQADFTSAAAAMTVDGKQYGVPYTYYQWGMYYRKDIFQKYDIAEPKTWD
EFKSAAATLKKNEIAPFTIGTKFLWTAAGWFDYLNLRTNGLDFHIKLMEGKIAYTDPRVKKTFENWKEIVEPGYYLENHA
AYSWQEAQPFLYNGQAAMYLIGNFITPSFPEELDGKMGFFQFPSIDPAIPMAEDAPMDTIHIPSKATNKVDARKFLEFVA
RAENQELINKKMLQIPTNNKAAVKDNEFLNTGVKMLNEAAGTAQFYDRDTDPAMAKAGMKGFQEFMVHPDRLDKILEQLE
KVRQRVFK
>Mature_408_residues
MKYVKHIAASAILTATLATSAYASTLVINSDASDPAPKEAWGEIISRFEVENPDITVKYNLYDHESYKTTIRNWLVTSPP
DVVFWYAGNRMKTFVDRGLFEDVSDIWEKNDLQADFTSAAAAMTVDGKQYGVPYTYYQWGMYYRKDIFQKYDIAEPKTWD
EFKSAAATLKKNEIAPFTIGTKFLWTAAGWFDYLNLRTNGLDFHIKLMEGKIAYTDPRVKKTFENWKEIVEPGYYLENHA
AYSWQEAQPFLYNGQAAMYLIGNFITPSFPEELDGKMGFFQFPSIDPAIPMAEDAPMDTIHIPSKATNKVDARKFLEFVA
RAENQELINKKMLQIPTNNKAAVKDNEFLNTGVKMLNEAAGTAQFYDRDTDPAMAKAGMKGFQEFMVHPDRLDKILEQLE
KVRQRVFK

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16 [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 46747; Mature: 46747

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYVKHIAASAILTATLATSAYASTLVINSDASDPAPKEAWGEIISRFEVENPDITVKYN
CCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEE
LYDHESYKTTIRNWLVTSPPDVVFWYAGNRMKTFVDRGLFEDVSDIWEKNDLQADFTSAA
EECCHHHHHHHHHCEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
AAMTVDGKQYGVPYTYYQWGMYYRKDIFQKYDIAEPKTWDEFKSAAATLKKNEIAPFTIG
EEEEECCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEC
TKFLWTAAGWFDYLNLRTNGLDFHIKLMEGKIAYTDPRVKKTFENWKEIVEPGYYLENHA
CHHHHHHHHHHHHHEEEECCCEEEEEEEECEEEECCCHHHHHHHHHHHHHCCCCEEECCC
AYSWQEAQPFLYNGQAAMYLIGNFITPSFPEELDGKMGFFQFPSIDPAIPMAEDAPMDTI
CCCCCCCCCEEECCCEEEEEEECCCCCCCCHHHCCCCCEEECCCCCCCCCCCCCCCCCEE
HIPSKATNKVDARKFLEFVARAENQELINKKMLQIPTNNKAAVKDNEFLNTGVKMLNEAA
ECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHC
GTAQFYDRDTDPAMAKAGMKGFQEFMVHPDRLDKILEQLEKVRQRVFK
CCHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKYVKHIAASAILTATLATSAYASTLVINSDASDPAPKEAWGEIISRFEVENPDITVKYN
CCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEE
LYDHESYKTTIRNWLVTSPPDVVFWYAGNRMKTFVDRGLFEDVSDIWEKNDLQADFTSAA
EECCHHHHHHHHHCEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
AAMTVDGKQYGVPYTYYQWGMYYRKDIFQKYDIAEPKTWDEFKSAAATLKKNEIAPFTIG
EEEEECCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEC
TKFLWTAAGWFDYLNLRTNGLDFHIKLMEGKIAYTDPRVKKTFENWKEIVEPGYYLENHA
CHHHHHHHHHHHHHEEEECCCEEEEEEEECEEEECCCHHHHHHHHHHHHHCCCCEEECCC
AYSWQEAQPFLYNGQAAMYLIGNFITPSFPEELDGKMGFFQFPSIDPAIPMAEDAPMDTI
CCCCCCCCCEEECCCEEEEEEECCCCCCCCHHHCCCCCEEECCCCCCCCCCCCCCCCCEE
HIPSKATNKVDARKFLEFVARAENQELINKKMLQIPTNNKAAVKDNEFLNTGVKMLNEAA
ECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHC
GTAQFYDRDTDPAMAKAGMKGFQEFMVHPDRLDKILEQLEKVRQRVFK
CCHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]