| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is fabH [H]
Identifier: 119945681
GI number: 119945681
Start: 2428581
End: 2429630
Strand: Direct
Name: fabH [H]
Synonym: Ping_1997
Alternate gene names: 119945681
Gene position: 2428581-2429630 (Clockwise)
Preceding gene: 119945680
Following gene: 119945682
Centisome position: 53.26
GC content: 46.67
Gene sequence:
>1050_bases ATGAAATACTCTAACGTTTTTATCAATAGTTTATCTTACGAATTGGCCCCCCAGGTCATTTCAAGCGTTGAATTAGAATC ACGCCTTGCGCCCTTGTATCAAAAGCTGCGTATCCCGATGGGACAACTGTCTGCCTTAACCGGTATTCAAGAACGGCGCT GGTGGCCAACTGATCATATTTTATCCGATGGTGCGATAGCGGCTGCACGCAAAGCAATTGCCGAAACCGCCATCGATATT AATGATCTGGGGGCGGTTGTTTATACAGGCGTCTGTCGGGATCAACACGAACCCGCCACGGCTTGCCGTATTGCTGCCGC ACTCGGTGTGAATAACAGTACAGCAATCTATGATATCAGTAATGCTTGTTTAGGGGTTTTATCCGGCATATTAGATATTG CCAATCGTATTGAGCTTGGGCAAATCAAAGCAGGATTAGTTGTCTCCTGTGAATCAGCCCGGCACATTGTTGATATTACG ATTGCAAATATGCTTGAAAATAAAACCATTCAAAATTACTCGCAATCTTTAGCAACCTTAACGGGTGGCTCTGGTGCCGT GGCGGTTTTATTAACCGATGGTTCACTGCCGCTTAAAAATACTCGCCAGCATAAATTACTAGGTGCGAGCCATCTTTCTG CCTCTGAGCACCATGACTTATGTAAATGGGGTTCACATCCAGTGGGTTTAAACCTGCACCGTGAATATATGCGTACGAGT GCCGTTCCGCTTCTTAAAGAAGGAGTCGCACTGGCTTTGCAGACCTGGCAACACTTTTTGCAGCAACGCGACTGGTCGGT CGAACAAGTTGATAAAGTCATTTGCCATCAGGTCGGCTCAGCAAATCAGAAAAAGGTGTTAGCCGCATTGAACATACCCC CTCACAAAGAGTTTCCCACTTTCCAAAAATTGGGCAACATGGGTACGGTGTCGCTACCAGTCACCGCCGCGATAGCGCAT GATCAGGGATTTCTGGTTAAAGGCGATAAAGTGAGCTTTTTGGGCATAGGCAGCGGACTGAACTGCATGATGTTAGGACT TGAGTGGTAA
Upstream 100 bases:
>100_bases TCACAATTTACGGTAATCTACGCGCTCGATTTGACACTATGGCTAGATTGGTCAATGTTGCTCTTTTTATGTTGAAATTT ATGAAAAATAAAGCAGTTTA
Downstream 100 bases:
>100_bases TATGAATCTAGATACTTTATTTCCTTTTAAACGCAATTATTTAGATCGTAATGGTCAGCAGTACCATTACCTAAATGAAG GTTCAGGTGAGCCGGTTGTG
Product: 3-oxoacyl-(acyl carrier protein) synthase III
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III [H]
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MKYSNVFINSLSYELAPQVISSVELESRLAPLYQKLRIPMGQLSALTGIQERRWWPTDHILSDGAIAAARKAIAETAIDI NDLGAVVYTGVCRDQHEPATACRIAAALGVNNSTAIYDISNACLGVLSGILDIANRIELGQIKAGLVVSCESARHIVDIT IANMLENKTIQNYSQSLATLTGGSGAVAVLLTDGSLPLKNTRQHKLLGASHLSASEHHDLCKWGSHPVGLNLHREYMRTS AVPLLKEGVALALQTWQHFLQQRDWSVEQVDKVICHQVGSANQKKVLAALNIPPHKEFPTFQKLGNMGTVSLPVTAAIAH DQGFLVKGDKVSFLGIGSGLNCMMLGLEW
Sequences:
>Translated_349_residues MKYSNVFINSLSYELAPQVISSVELESRLAPLYQKLRIPMGQLSALTGIQERRWWPTDHILSDGAIAAARKAIAETAIDI NDLGAVVYTGVCRDQHEPATACRIAAALGVNNSTAIYDISNACLGVLSGILDIANRIELGQIKAGLVVSCESARHIVDIT IANMLENKTIQNYSQSLATLTGGSGAVAVLLTDGSLPLKNTRQHKLLGASHLSASEHHDLCKWGSHPVGLNLHREYMRTS AVPLLKEGVALALQTWQHFLQQRDWSVEQVDKVICHQVGSANQKKVLAALNIPPHKEFPTFQKLGNMGTVSLPVTAAIAH DQGFLVKGDKVSFLGIGSGLNCMMLGLEW >Mature_349_residues MKYSNVFINSLSYELAPQVISSVELESRLAPLYQKLRIPMGQLSALTGIQERRWWPTDHILSDGAIAAARKAIAETAIDI NDLGAVVYTGVCRDQHEPATACRIAAALGVNNSTAIYDISNACLGVLSGILDIANRIELGQIKAGLVVSCESARHIVDIT IANMLENKTIQNYSQSLATLTGGSGAVAVLLTDGSLPLKNTRQHKLLGASHLSASEHHDLCKWGSHPVGLNLHREYMRTS AVPLLKEGVALALQTWQHFLQQRDWSVEQVDKVICHQVGSANQKKVLAALNIPPHKEFPTFQKLGNMGTVSLPVTAAIAH DQGFLVKGDKVSFLGIGSGLNCMMLGLEW
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]
EC number: =2.3.1.41 [H]
Molecular weight: Translated: 37740; Mature: 37740
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYSNVFINSLSYELAPQVISSVELESRLAPLYQKLRIPMGQLSALTGIQERRWWPTDHI CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHCCCCHHHH LSDGAIAAARKAIAETAIDINDLGAVVYTGVCRDQHEPATACRIAAALGVNNSTAIYDIS HCCCHHHHHHHHHHHHHCCHHHCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEHH NACLGVLSGILDIANRIELGQIKAGLVVSCESARHIVDITIANMLENKTIQNYSQSLATL HHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHE TGGSGAVAVLLTDGSLPLKNTRQHKLLGASHLSASEHHDLCKWGSHPVGLNLHREYMRTS ECCCCEEEEEEECCCCCCCCCCHHHHHCHHHCCCCCCCHHHHCCCCCCCCCHHHHHHHHH AVPLLKEGVALALQTWQHFLQQRDWSVEQVDKVICHQVGSANQKKVLAALNIPPHKEFPT CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCH FQKLGNMGTVSLPVTAAIAHDQGFLVKGDKVSFLGIGSGLNCMMLGLEW HHHHCCCCEEEECEEEEEECCCCEEEECCEEEEEEECCCCEEEEEEECC >Mature Secondary Structure MKYSNVFINSLSYELAPQVISSVELESRLAPLYQKLRIPMGQLSALTGIQERRWWPTDHI CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHCCCCHHHH LSDGAIAAARKAIAETAIDINDLGAVVYTGVCRDQHEPATACRIAAALGVNNSTAIYDIS HCCCHHHHHHHHHHHHHCCHHHCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEHH NACLGVLSGILDIANRIELGQIKAGLVVSCESARHIVDITIANMLENKTIQNYSQSLATL HHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHE TGGSGAVAVLLTDGSLPLKNTRQHKLLGASHLSASEHHDLCKWGSHPVGLNLHREYMRTS ECCCCEEEEEEECCCCCCCCCCHHHHHCHHHCCCCCCCHHHHCCCCCCCCCHHHHHHHHH AVPLLKEGVALALQTWQHFLQQRDWSVEQVDKVICHQVGSANQKKVLAALNIPPHKEFPT CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCH FQKLGNMGTVSLPVTAAIAHDQGFLVKGDKVSFLGIGSGLNCMMLGLEW HHHHCCCCEEEECEEEEEECCCCEEEECCEEEEEEECCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA