Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

Click here to switch to the map view.

The map label for this gene is kch [C]

Identifier: 119945510

GI number: 119945510

Start: 2200715

End: 2201515

Strand: Direct

Name: kch [C]

Synonym: Ping_1814

Alternate gene names: 119945510

Gene position: 2200715-2201515 (Clockwise)

Preceding gene: 119945508

Following gene: 119945511

Centisome position: 48.27

GC content: 44.82

Gene sequence:

>801_bases
ATGACTGATAAGCCCTCTCAGACCGGCTTTGGGCAACAACTTCGTAAGCAAATTGATTTTCTCTATAATGGAGCGAGCAC
AAGGGCGCGCAATTTTCGTTGGGGGTTACTCGCCTTTGATGGTATGACTATCCTTTATTTCGTCGTAGGCTCATTTTTTC
CGAGTCTGCATAGTCAGTATCTGCTGGAGCAGGGCATTGGTATTATCTATCTGCTCGAATTTTGTGCCCGCCTGTCTATC
AGCAAAAAACGACTTCGAGATATCTTTCATCCGGTGGGATTGGCTGATTTGATAGTCATTGCCTCATTGCTGGTTCCCTC
GCTGTTGGGTAATTTAAGTTTTCTGCGCGTCTTACGCTCACTGCGATTACTGCGCTCTTACCGCATGCTTAAAAATCTGC
GTGGGCAATCAACTTTTGTTCGTTTACATGAAGATATCATTTTCAGCATCGTTAACCTGTTGGTATTTATTTTTGTCATT
ACCGCGATCGTCTATGTCAGTCAGGTAGGCGTCAACCCTGACATAAAAAGTTATGTCGATGCCTTGTATTTTACTATCTC
GACGTTAACAACAACCGGTTTTGGTGACATCACGCTAATCGGTACCAGCGGGCATCTTCTGGCGGTGCTGATCATGATTT
TCGGTATTTCTCTGTTCTTGCGCCTGATTCAAACTATTTTCCGGCCTGAGAAAATACCCTATGAATGTCCTACCTGCGGG
CTAAATCGTCACGATATTGATGCTGTCCATTGCAAACATTGCGGGCAGGTGTTACGCATCACCACTGAAGGCAGTAATTA
G

Upstream 100 bases:

>100_bases
GAGGATAGTGAAGTTCAGCATGATAGAGACTTATATCTATACTGGATGCATCTCCCTTTTCTCGTCCACCGTTAGCTTTT
ATTTAAGAATAAGGTAATTT

Downstream 100 bases:

>100_bases
TTATTATATTAATCTCTTATCTTCACCTATTATTGCGAACACTCCTTACCATTCATAACCTGTTGGCCTTCAACGAGCCA
AGCGGTAATGAGTTTGCCGT

Product: Ion transport 2 domain-containing protein

Products: K (I) [Cytoplasm] [C]

Alternate protein names: Ion Transport 2 Domain Protein; Cation Channel Family Protein; Ion Channel Family; Ion Transporter; Ion Channel; Ion Transport Domain Protein C-Terminal; Voltage-Gated K+ Channel Protein; Ion Channel Family Protein; Ionic Voltage-Gated Channel Protein; Voltage-Gated Potassium Channel; Ion Transport 2 Family Protein; Transmembrane Ion Transporter

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MTDKPSQTGFGQQLRKQIDFLYNGASTRARNFRWGLLAFDGMTILYFVVGSFFPSLHSQYLLEQGIGIIYLLEFCARLSI
SKKRLRDIFHPVGLADLIVIASLLVPSLLGNLSFLRVLRSLRLLRSYRMLKNLRGQSTFVRLHEDIIFSIVNLLVFIFVI
TAIVYVSQVGVNPDIKSYVDALYFTISTLTTTGFGDITLIGTSGHLLAVLIMIFGISLFLRLIQTIFRPEKIPYECPTCG
LNRHDIDAVHCKHCGQVLRITTEGSN

Sequences:

>Translated_266_residues
MTDKPSQTGFGQQLRKQIDFLYNGASTRARNFRWGLLAFDGMTILYFVVGSFFPSLHSQYLLEQGIGIIYLLEFCARLSI
SKKRLRDIFHPVGLADLIVIASLLVPSLLGNLSFLRVLRSLRLLRSYRMLKNLRGQSTFVRLHEDIIFSIVNLLVFIFVI
TAIVYVSQVGVNPDIKSYVDALYFTISTLTTTGFGDITLIGTSGHLLAVLIMIFGISLFLRLIQTIFRPEKIPYECPTCG
LNRHDIDAVHCKHCGQVLRITTEGSN
>Mature_265_residues
TDKPSQTGFGQQLRKQIDFLYNGASTRARNFRWGLLAFDGMTILYFVVGSFFPSLHSQYLLEQGIGIIYLLEFCARLSIS
KKRLRDIFHPVGLADLIVIASLLVPSLLGNLSFLRVLRSLRLLRSYRMLKNLRGQSTFVRLHEDIIFSIVNLLVFIFVIT
AIVYVSQVGVNPDIKSYVDALYFTISTLTTTGFGDITLIGTSGHLLAVLIMIFGISLFLRLIQTIFRPEKIPYECPTCGL
NRHDIDAVHCKHCGQVLRITTEGSN

Specific function: May Play A Role In The Defense Against Osmotic Shock. [C]

COG id: COG1226

COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI26051262, Length=243, Percent_Identity=27.9835390946502, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI26051260, Length=243, Percent_Identity=27.9835390946502, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI26051266, Length=243, Percent_Identity=27.9835390946502, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI26051264, Length=243, Percent_Identity=27.9835390946502, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI236462242, Length=162, Percent_Identity=33.9506172839506, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI236462079, Length=162, Percent_Identity=33.9506172839506, Blast_Score=65, Evalue=8e-11,
Organism=Homo sapiens, GI236461942, Length=162, Percent_Identity=33.9506172839506, Blast_Score=65, Evalue=8e-11,
Organism=Homo sapiens, GI28373065, Length=162, Percent_Identity=33.9506172839506, Blast_Score=65, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29997; Mature: 29866

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDKPSQTGFGQQLRKQIDFLYNGASTRARNFRWGLLAFDGMTILYFVVGSFFPSLHSQY
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH
LLEQGIGIIYLLEFCARLSISKKRLRDIFHPVGLADLIVIASLLVPSLLGNLSFLRVLRS
HHHHCCHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRLLRSYRMLKNLRGQSTFVRLHEDIIFSIVNLLVFIFVITAIVYVSQVGVNPDIKSYVD
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
ALYFTISTLTTTGFGDITLIGTSGHLLAVLIMIFGISLFLRLIQTIFRPEKIPYECPTCG
HHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
LNRHDIDAVHCKHCGQVLRITTEGSN
CCCCCCHHHHHHHCCCEEEEEECCCC
>Mature Secondary Structure 
TDKPSQTGFGQQLRKQIDFLYNGASTRARNFRWGLLAFDGMTILYFVVGSFFPSLHSQY
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH
LLEQGIGIIYLLEFCARLSISKKRLRDIFHPVGLADLIVIASLLVPSLLGNLSFLRVLRS
HHHHCCHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRLLRSYRMLKNLRGQSTFVRLHEDIIFSIVNLLVFIFVITAIVYVSQVGVNPDIKSYVD
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
ALYFTISTLTTTGFGDITLIGTSGHLLAVLIMIFGISLFLRLIQTIFRPEKIPYECPTCG
HHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
LNRHDIDAVHCKHCGQVLRITTEGSN
CCCCCCHHHHHHHCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: K (I) [Periplasm] [C]

Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA