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The map label for this gene is yfgC [C]

Identifier: 119945496

GI number: 119945496

Start: 2184209

End: 2185000

Strand: Direct

Name: yfgC [C]

Synonym: Ping_1800

Alternate gene names: 119945496

Gene position: 2184209-2185000 (Clockwise)

Preceding gene: 119945494

Following gene: 119945498

Centisome position: 47.9

GC content: 42.93

Gene sequence:

>792_bases
ATGAAAATAATAAAACCATTTTTATTGTCGACTGTAGTGGCCGCATCATTGACATTGTATGGCTGCGCAAACTCTCCAAC
AGGTAGAACGCAAATTTTACTCTTTTCGGGTACAGAGATGTCACAGCTGGGCGCGCAGTCGTTCGAAGAGATAAAAAAAC
AGGAAAAGATCAGTACGGATAAAAAAACAAATGTCTATGTACAGTGTGTGACTAGCGCAATTACCGCTCGTTTAGCACCT
CAATCTGATTTTACACAATGGGAGGTTGTTGTTTTTGATAGTGAACAGATCAATGCCTTTGCACTGCCAGGCGGTAAAAT
AGGTGTTTATAGCGGTTTACTCAAAGTGGCGGTTAATCAAGATCAATTAGCAACGGTGATTGGCCATGAAATTGGTCATG
TGATGGCAAATCATAGCAACGAACGACTTTCTAGAAGTCAGTTAGCCAATACGGGATTACAACTTTCTAATCTTGCTCTG
GGGGGAGCTGAATATCAAAATATAGCAATGGCGGGGCTTGGTTTAGGTGTACAGTATGGGATCTTAATGCCCTATGGGCG
TGCGCAGGAGTCTGAGTCTGACACGCTAGGATTAAAGCTGATGGCTGAAGCTGGGTTTGATCCGCAACAAAGTGTTAATT
TGTGGGTCAATATGGCCAAGGCTTCCGGTGGAAATCAGCCACCTGAGTTATTATCCACCCACCCGTCAAACTCAACGCGT
ATTAAAAACTTAAAGGCGCAGGTAGCGGCTTTACCTGCAAGTAATGTAAAAGGTCAGAATTGTAAATTGTAA

Upstream 100 bases:

>100_bases
AAACAGATATCTCCCTTTGCAGTACTTTTTTTTAGTGATATTCAGTCGTATTCAATAAGGTAAGAAGTGAAAGGTAATGA
TAAATAGAGGAATTGTTAGT

Downstream 100 bases:

>100_bases
CTGAAAAGAAGGGGGGTGGTTTTCAGATAAGAAAACCACACCCTTATTTACGCTAACAATCTCGGCAGCTTAATTTCATT
TATTTATTTCATATCTTGTT

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MKIIKPFLLSTVVAASLTLYGCANSPTGRTQILLFSGTEMSQLGAQSFEEIKKQEKISTDKKTNVYVQCVTSAITARLAP
QSDFTQWEVVVFDSEQINAFALPGGKIGVYSGLLKVAVNQDQLATVIGHEIGHVMANHSNERLSRSQLANTGLQLSNLAL
GGAEYQNIAMAGLGLGVQYGILMPYGRAQESESDTLGLKLMAEAGFDPQQSVNLWVNMAKASGGNQPPELLSTHPSNSTR
IKNLKAQVAALPASNVKGQNCKL

Sequences:

>Translated_263_residues
MKIIKPFLLSTVVAASLTLYGCANSPTGRTQILLFSGTEMSQLGAQSFEEIKKQEKISTDKKTNVYVQCVTSAITARLAP
QSDFTQWEVVVFDSEQINAFALPGGKIGVYSGLLKVAVNQDQLATVIGHEIGHVMANHSNERLSRSQLANTGLQLSNLAL
GGAEYQNIAMAGLGLGVQYGILMPYGRAQESESDTLGLKLMAEAGFDPQQSVNLWVNMAKASGGNQPPELLSTHPSNSTR
IKNLKAQVAALPASNVKGQNCKL
>Mature_263_residues
MKIIKPFLLSTVVAASLTLYGCANSPTGRTQILLFSGTEMSQLGAQSFEEIKKQEKISTDKKTNVYVQCVTSAITARLAP
QSDFTQWEVVVFDSEQINAFALPGGKIGVYSGLLKVAVNQDQLATVIGHEIGHVMANHSNERLSRSQLANTGLQLSNLAL
GGAEYQNIAMAGLGLGVQYGILMPYGRAQESESDTLGLKLMAEAGFDPQQSVNLWVNMAKASGGNQPPELLSTHPSNSTR
IKNLKAQVAALPASNVKGQNCKL

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TPR repeat [H]

Homologues:

Organism=Homo sapiens, GI21686999, Length=231, Percent_Identity=30.7359307359307, Blast_Score=92, Evalue=4e-19,
Organism=Escherichia coli, GI1788840, Length=167, Percent_Identity=28.1437125748503, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI87081800, Length=256, Percent_Identity=24.21875, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI87082185, Length=257, Percent_Identity=26.0700389105058, Blast_Score=64, Evalue=8e-12,
Organism=Saccharomyces cerevisiae, GI6322940, Length=223, Percent_Identity=32.7354260089686, Blast_Score=112, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011716
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48; PF07720 TPR_3 [H]

EC number: NA

Molecular weight: Translated: 28094; Mature: 28094

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIKPFLLSTVVAASLTLYGCANSPTGRTQILLFSGTEMSQLGAQSFEEIKKQEKISTD
CCCHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCC
KKTNVYVQCVTSAITARLAPQSDFTQWEVVVFDSEQINAFALPGGKIGVYSGLLKVAVNQ
CCCCCEEEEHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHCCH
DQLATVIGHEIGHVMANHSNERLSRSQLANTGLQLSNLALGGAEYQNIAMAGLGLGVQYG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEHEEECCCCHHHEEEECCCCCEEEE
ILMPYGRAQESESDTLGLKLMAEAGFDPQQSVNLWVNMAKASGGNQPPELLSTHPSNSTR
EECCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCHHHHCCCCCCCHH
IKNLKAQVAALPASNVKGQNCKL
HHHHHHHHEECCCCCCCCCCCCC
>Mature Secondary Structure
MKIIKPFLLSTVVAASLTLYGCANSPTGRTQILLFSGTEMSQLGAQSFEEIKKQEKISTD
CCCHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCC
KKTNVYVQCVTSAITARLAPQSDFTQWEVVVFDSEQINAFALPGGKIGVYSGLLKVAVNQ
CCCCCEEEEHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHCCH
DQLATVIGHEIGHVMANHSNERLSRSQLANTGLQLSNLALGGAEYQNIAMAGLGLGVQYG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEHEEECCCCHHHEEEECCCCCEEEE
ILMPYGRAQESESDTLGLKLMAEAGFDPQQSVNLWVNMAKASGGNQPPELLSTHPSNSTR
EECCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCHHHHCCCCCCCHH
IKNLKAQVAALPASNVKGQNCKL
HHHHHHHHEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]