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The map label for this gene is nifU [H]

Identifier: 119945236

GI number: 119945236

Start: 1850588

End: 1851049

Strand: Reverse

Name: nifU [H]

Synonym: Ping_1504

Alternate gene names: 119945236

Gene position: 1851049-1850588 (Counterclockwise)

Preceding gene: 119945237

Following gene: 119945235

Centisome position: 40.6

GC content: 46.32

Gene sequence:

>462_bases
ATGAATGATGAACTACGCGCATTGTATCAGGAAGTGATCATTGACCATGGCCGCCGTCCGAGAAATTCCAAAAAGCTTGA
GCATCCGAGTTGCACTCAAGAAGGATACAACCCGCTCTGTGGTGACCGTTTGACACTTTATTTGCGAATTGATGATAATA
GAATTATTGATGCCAGTTTTGAGGGAGAAGGCTGTGCTATCTCGATGGCGGCATCTTCATTGATGACAGAAAGAATCAAA
AATATGACAGTGACAGAAGCACGGCAACTGTTTACCGCTTTTCAGAACTTAGTCACGCAAGCTGAGCCGCCTGACAATAT
CCGTGAGTACTTAGGCAAGCTCTCGGTATTAGGTGGGGTGAGAGATTTCCCCGTCCGCATAAAGTGCGCAACCCTGCCCT
GGCACGCACTTAATGCCTGCTTAAATAATATCAACACTAAGCAGATCGTTTCGACGGAGTGA

Upstream 100 bases:

>100_bases
CTTCCTTTTCTTTCTACAATAATGAAAGTGATATAGAACAATTAGTGCAAAGTTTGCGGCTGGTAAACAAAATTTTTACC
ATAAAAAATGGGTGAATAAG

Downstream 100 bases:

>100_bases
ACAGCATGTTTGAACACCTGACTGTATTACGCGATTGTAAAGCCATTACTATTCCATATGGGGAAACTATTACCCTTAAG
GAAGGTGATGAAGTTGTTAT

Product: SUF system FeS assembly protein, NifU family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MNDELRALYQEVIIDHGRRPRNSKKLEHPSCTQEGYNPLCGDRLTLYLRIDDNRIIDASFEGEGCAISMAASSLMTERIK
NMTVTEARQLFTAFQNLVTQAEPPDNIREYLGKLSVLGGVRDFPVRIKCATLPWHALNACLNNINTKQIVSTE

Sequences:

>Translated_153_residues
MNDELRALYQEVIIDHGRRPRNSKKLEHPSCTQEGYNPLCGDRLTLYLRIDDNRIIDASFEGEGCAISMAASSLMTERIK
NMTVTEARQLFTAFQNLVTQAEPPDNIREYLGKLSVLGGVRDFPVRIKCATLPWHALNACLNNINTKQIVSTE
>Mature_153_residues
MNDELRALYQEVIIDHGRRPRNSKKLEHPSCTQEGYNPLCGDRLTLYLRIDDNRIIDASFEGEGCAISMAASSLMTERIK
NMTVTEARQLFTAFQNLVTQAEPPDNIREYLGKLSVLGGVRDFPVRIKCATLPWHALNACLNNINTKQIVSTE

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

Organism=Drosophila melanogaster, GI21355597, Length=146, Percent_Identity=31.5068493150685, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002871
- InterPro:   IPR011341 [H]

Pfam domain/function: PF01592 NifU_N [H]

EC number: NA

Molecular weight: Translated: 17281; Mature: 17281

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDELRALYQEVIIDHGRRPRNSKKLEHPSCTQEGYNPLCGDRLTLYLRIDDNRIIDASF
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEECC
EGEGCAISMAASSLMTERIKNMTVTEARQLFTAFQNLVTQAEPPDNIREYLGKLSVLGGV
CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
RDFPVRIKCATLPWHALNACLNNINTKQIVSTE
CCCCEEEEEECCCHHHHHHHHHCCCCCEEECCC
>Mature Secondary Structure
MNDELRALYQEVIIDHGRRPRNSKKLEHPSCTQEGYNPLCGDRLTLYLRIDDNRIIDASF
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEECC
EGEGCAISMAASSLMTERIKNMTVTEARQLFTAFQNLVTQAEPPDNIREYLGKLSVLGGV
CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
RDFPVRIKCATLPWHALNACLNNINTKQIVSTE
CCCCEEEEEECCCHHHHHHHHHCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]