Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

Click here to switch to the map view.

The map label for this gene is yitW [H]

Identifier: 119945235

GI number: 119945235

Start: 1850043

End: 1850582

Strand: Reverse

Name: yitW [H]

Synonym: Ping_1503

Alternate gene names: 119945235

Gene position: 1850582-1850043 (Counterclockwise)

Preceding gene: 119945236

Following gene: 119945234

Centisome position: 40.59

GC content: 43.33

Gene sequence:

>540_bases
ATGTTTGAACACCTGACTGTATTACGCGATTGTAAAGCCATTACTATTCCATATGGGGAAACTATTACCCTTAAGGAAGG
TGATGAAGTTGTTATTACTCAGGCATTGGGTGGCAGTTACACACTTAATTATCACGGGCAGTTATTACGTGTGGGCAACG
AAGATAGCGATGCGCTTGGAAAACCTGCGCTAATAGCCACCAGCAAAGAAAATACAGCCGATCATGAAGTCAACTTTGTA
CAACTCTATGAACAGCTTAAAAGCTGTTATGACCCTGAGATCCCTATCAATATTGTAGAACTCGGCTTGATCTATGACGT
TAACTGCTATCAATTAATTGATGGGCGAAATCTTGTGCGTATAACGATGACTTTGACTGCCACCGGTTGTGCTATGGGCA
CGGTGATAGCTGATGAGATAAAACGTAAATGTCTGGCTCTGGCCAATGTTGATAAGGTTGAGGTGGCTATTGTCTTTGAT
CCTCCATGGAGTTACGAAATGGTCTCCGATGCGGCAAAACTGCAGCTGGGGCTGCTATAA

Upstream 100 bases:

>100_bases
TCCCCGTCCGCATAAAGTGCGCAACCCTGCCCTGGCACGCACTTAATGCCTGCTTAAATAATATCAACACTAAGCAGATC
GTTTCGACGGAGTGAACAGC

Downstream 100 bases:

>100_bases
AAAATGAGGAGTTTATAGAATGGCAAAATGGATAAGCGTTTTACCCGCAGATGAGTTAAGCGCTGGCATGACTAAAGTGC
TGGCGTTAGATCAAATAGAG

Product: aromatic ring hydroxylating enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MFEHLTVLRDCKAITIPYGETITLKEGDEVVITQALGGSYTLNYHGQLLRVGNEDSDALGKPALIATSKENTADHEVNFV
QLYEQLKSCYDPEIPINIVELGLIYDVNCYQLIDGRNLVRITMTLTATGCAMGTVIADEIKRKCLALANVDKVEVAIVFD
PPWSYEMVSDAAKLQLGLL

Sequences:

>Translated_179_residues
MFEHLTVLRDCKAITIPYGETITLKEGDEVVITQALGGSYTLNYHGQLLRVGNEDSDALGKPALIATSKENTADHEVNFV
QLYEQLKSCYDPEIPINIVELGLIYDVNCYQLIDGRNLVRITMTLTATGCAMGTVIADEIKRKCLALANVDKVEVAIVFD
PPWSYEMVSDAAKLQLGLL
>Mature_179_residues
MFEHLTVLRDCKAITIPYGETITLKEGDEVVITQALGGSYTLNYHGQLLRVGNEDSDALGKPALIATSKENTADHEVNFV
QLYEQLKSCYDPEIPINIVELGLIYDVNCYQLIDGRNLVRITMTLTATGCAMGTVIADEIKRKCLALANVDKVEVAIVFD
PPWSYEMVSDAAKLQLGLL

Specific function: Unknown

COG id: COG2151

COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MIP18 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002744 [H]

Pfam domain/function: PF01883 DUF59 [H]

EC number: NA

Molecular weight: Translated: 19739; Mature: 19739

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEHLTVLRDCKAITIPYGETITLKEGDEVVITQALGGSYTLNYHGQLLRVGNEDSDALG
CCCCHHHHHCCCEEEECCCCEEEEECCCEEEEEEECCCEEEEEECCEEEEECCCCCCCCC
KPALIATSKENTADHEVNFVQLYEQLKSCYDPEIPINIVELGLIYDVNCYQLIDGRNLVR
CCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCEEEEECCCCEEE
ITMTLTATGCAMGTVIADEIKRKCLALANVDKVEVAIVFDPPWSYEMVSDAAKLQLGLL
EEEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHCHHHEEECCC
>Mature Secondary Structure
MFEHLTVLRDCKAITIPYGETITLKEGDEVVITQALGGSYTLNYHGQLLRVGNEDSDALG
CCCCHHHHHCCCEEEECCCCEEEEECCCEEEEEEECCCEEEEEECCEEEEECCCCCCCCC
KPALIATSKENTADHEVNFVQLYEQLKSCYDPEIPINIVELGLIYDVNCYQLIDGRNLVR
CCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCEEEEECCCCEEE
ITMTLTATGCAMGTVIADEIKRKCLALANVDKVEVAIVFDPPWSYEMVSDAAKLQLGLL
EEEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHCHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353931; 9025291; 9384377 [H]