| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945026
Identifier: 119945026
GI number: 119945026
Start: 1587453
End: 1587977
Strand: Direct
Name: 119945026
Synonym: Ping_1280
Alternate gene names: NA
Gene position: 1587453-1587977 (Clockwise)
Preceding gene: 119945024
Following gene: 119945029
Centisome position: 34.82
GC content: 33.9
Gene sequence:
>525_bases ATGCGATTCATTAAATTTGGAAGATGTATATTAATCTTTTCTGTTTTAGTCGGATGCGTTCCAAATGCGACTGTTTATTA TAAACCTCTTGTTGATGTTGAAAGTACACATGAAAAGTCGCATTGCGTACCGACTGAAAAATATGTCAATTTCATCATAA AAACAAAGGATCAGACATTAAAAGTCAGAGGTTATGGAAATACATATTCAACTTCTCATGGTGAGGTAAGCGAAGGACAG TTCGTAATATATGGAAATTGGAATGAAATCAACTTCAAAAACGAAGATTTTTATATTACGGCTCCTGCTATTAATGACAA ATCTAAACCAATACAGATATATGGAGAGGTGCATGATTTTGATGGTTATTCATCATTTAATTCTGGTGCTGTTTTCCCCA AACAGGATGGAGATAGTTTCGATGTAATTTTCCCTTCACTGATAATTGATGGTGAAGAAGTCAAGCTTCCAACGCTTCAT ATTAAAAGAACGGTTTGGATAGGAATTAGTCCGTTTAACTGTTAA
Upstream 100 bases:
>100_bases ACAACGAGATCTCTTAAATCAAAACGTCCGCTTTCATCCATTAGTAGATATTATGGAAATGAGCAATACCCTAAAAATCA CTCTTTAGGTCATAAATACA
Downstream 100 bases:
>100_bases CACTTTTCTTTATAGCTGTATTGAAGAAGTGTCATTTCTATTTGATCAAGTCCGCTTGGGTAGAAAGCCGATCATTATAA GCTAATAATGGGCTACGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MRFIKFGRCILIFSVLVGCVPNATVYYKPLVDVESTHEKSHCVPTEKYVNFIIKTKDQTLKVRGYGNTYSTSHGEVSEGQ FVIYGNWNEINFKNEDFYITAPAINDKSKPIQIYGEVHDFDGYSSFNSGAVFPKQDGDSFDVIFPSLIIDGEEVKLPTLH IKRTVWIGISPFNC
Sequences:
>Translated_174_residues MRFIKFGRCILIFSVLVGCVPNATVYYKPLVDVESTHEKSHCVPTEKYVNFIIKTKDQTLKVRGYGNTYSTSHGEVSEGQ FVIYGNWNEINFKNEDFYITAPAINDKSKPIQIYGEVHDFDGYSSFNSGAVFPKQDGDSFDVIFPSLIIDGEEVKLPTLH IKRTVWIGISPFNC >Mature_174_residues MRFIKFGRCILIFSVLVGCVPNATVYYKPLVDVESTHEKSHCVPTEKYVNFIIKTKDQTLKVRGYGNTYSTSHGEVSEGQ FVIYGNWNEINFKNEDFYITAPAINDKSKPIQIYGEVHDFDGYSSFNSGAVFPKQDGDSFDVIFPSLIIDGEEVKLPTLH IKRTVWIGISPFNC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19734; Mature: 19734
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFIKFGRCILIFSVLVGCVPNATVYYKPLVDVESTHEKSHCVPTEKYVNFIIKTKDQTL CCEEECCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCHHHEEEEEECCCCEE KVRGYGNTYSTSHGEVSEGQFVIYGNWNEINFKNEDFYITAPAINDKSKPIQIYGEVHDF EEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEECC DGYSSFNSGAVFPKQDGDSFDVIFPSLIIDGEEVKLPTLHIKRTVWIGISPFNC CCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCEECCEEEEEEEEEEEEECCCC >Mature Secondary Structure MRFIKFGRCILIFSVLVGCVPNATVYYKPLVDVESTHEKSHCVPTEKYVNFIIKTKDQTL CCEEECCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCHHHEEEEEECCCCEE KVRGYGNTYSTSHGEVSEGQFVIYGNWNEINFKNEDFYITAPAINDKSKPIQIYGEVHDF EEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEECC DGYSSFNSGAVFPKQDGDSFDVIFPSLIIDGEEVKLPTLHIKRTVWIGISPFNC CCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCEECCEEEEEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA