| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is tesB [H]
Identifier: 119945024
GI number: 119945024
Start: 1585657
End: 1586526
Strand: Direct
Name: tesB [H]
Synonym: Ping_1278
Alternate gene names: 119945024
Gene position: 1585657-1586526 (Clockwise)
Preceding gene: 119945023
Following gene: 119945026
Centisome position: 34.78
GC content: 40.46
Gene sequence:
>870_bases ATGAGTAAAGTACTAAAAGATCTTCTAAGCCAGTTGAATTTAGAAAAACTAGAAGAAAACTTATTCCGTGGTAATAACCA AGATCTTGGTACTGGTAGAGTTTTTGGCGGACAAGTTATGGGTCAAGCCATTTCAGCTGCCAAAGACACCGTCAGTGAAA ATAGAAATGTGCATTCTTTTCACTCCTATTTTCTGCTTGCAGGAGAAACTGACAAGCCCATTGTTTATGATGTTGAGCGT ATTCGTGATGGTAAAAGCCTTTCCACAAGGCGCGTTAAAGCTGTTCAAAATGGCAAAGCTATTTTTTATATGACCGCGTC TTTTAAAAATAGGGAGCATGGTTTTGAACATCAATTAGAGATGCCCGATGTGCCAAAGCCTGAAGATTTAATTTCAGAAC AAGAGATGTCATTGCTGCACACGGATACATTACCAGAATCGATACGTGATAAACTTATTTCTGAAAAACCGATAGAGATG CGGCCTGTCACCTTTGTCAATCCGAGTAATCCTGAGGTTGAGTCTGCTAAACGATTTATTTGGTGCAGAGCCAATGGAAA AATGCCCGATGATTTACGTATACATCGCTATTTATTAGCATACGCGTCTGATTTCAACTTCCTGCCAACCGCATTACAGC CCCATGGTGTTTCGTATTTATCGCCTGGTATGCAGGTTGTTACCATCGATCATTCTATGTGGTTTCATCATGATTTCCGT TTAGATGACTGGTTATTATATGTCGTTGAAAGTCCGGCTGCATCGGATGGATGCGCTCTGGTAAAGGGACACTTTTATAC AAGAGAGGGAAAATTAGTTGCTTCAACGATTCAGGAAGGCTTGATTCGCCAAAGAAAGGTAAGAGTGTAA
Upstream 100 bases:
>100_bases TTAGAGCACTATTGATGTCTTTGTAATAGTATTTGTAAATAAAAATAAGATTTGTAAATAAAAAAGGGCGGTTATTAACG CCCTTTTTTGGGGAGCTAAA
Downstream 100 bases:
>100_bases ACTAAATAAAAATGGAAGGGACTCACCTTCCTTTTATCCATCTTTAACAAAGGTTTTGATTTAAGTCAGCCTTACATCTC TATTAGTTATTGGACTTATG
Product: acyl-CoA thioesterase II
Products: Hydrolyzed acyl-CoA thioesters [C]
Alternate protein names: Acyl-CoA thioesterase II; TEII [H]
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MSKVLKDLLSQLNLEKLEENLFRGNNQDLGTGRVFGGQVMGQAISAAKDTVSENRNVHSFHSYFLLAGETDKPIVYDVER IRDGKSLSTRRVKAVQNGKAIFYMTASFKNREHGFEHQLEMPDVPKPEDLISEQEMSLLHTDTLPESIRDKLISEKPIEM RPVTFVNPSNPEVESAKRFIWCRANGKMPDDLRIHRYLLAYASDFNFLPTALQPHGVSYLSPGMQVVTIDHSMWFHHDFR LDDWLLYVVESPAASDGCALVKGHFYTREGKLVASTIQEGLIRQRKVRV
Sequences:
>Translated_289_residues MSKVLKDLLSQLNLEKLEENLFRGNNQDLGTGRVFGGQVMGQAISAAKDTVSENRNVHSFHSYFLLAGETDKPIVYDVER IRDGKSLSTRRVKAVQNGKAIFYMTASFKNREHGFEHQLEMPDVPKPEDLISEQEMSLLHTDTLPESIRDKLISEKPIEM RPVTFVNPSNPEVESAKRFIWCRANGKMPDDLRIHRYLLAYASDFNFLPTALQPHGVSYLSPGMQVVTIDHSMWFHHDFR LDDWLLYVVESPAASDGCALVKGHFYTREGKLVASTIQEGLIRQRKVRV >Mature_288_residues SKVLKDLLSQLNLEKLEENLFRGNNQDLGTGRVFGGQVMGQAISAAKDTVSENRNVHSFHSYFLLAGETDKPIVYDVERI RDGKSLSTRRVKAVQNGKAIFYMTASFKNREHGFEHQLEMPDVPKPEDLISEQEMSLLHTDTLPESIRDKLISEKPIEMR PVTFVNPSNPEVESAKRFIWCRANGKMPDDLRIHRYLLAYASDFNFLPTALQPHGVSYLSPGMQVVTIDHSMWFHHDFRL DDWLLYVVESPAASDGCALVKGHFYTREGKLVASTIQEGLIRQRKVRV
Specific function: Can hydrolyze a broad range of acyl-CoA thioesters. Its physiological function is not known [H]
COG id: COG1946
COG function: function code I; Acyl-CoA thioesterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the C/M/P thioester hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI34577075, Length=280, Percent_Identity=42.5, Blast_Score=213, Evalue=2e-55, Organism=Escherichia coli, GI1786657, Length=283, Percent_Identity=59.7173144876325, Blast_Score=348, Evalue=2e-97, Organism=Caenorhabditis elegans, GI71988741, Length=294, Percent_Identity=39.1156462585034, Blast_Score=197, Evalue=8e-51, Organism=Caenorhabditis elegans, GI17558508, Length=308, Percent_Identity=39.6103896103896, Blast_Score=193, Evalue=1e-49, Organism=Caenorhabditis elegans, GI17531889, Length=286, Percent_Identity=35.6643356643357, Blast_Score=168, Evalue=3e-42, Organism=Caenorhabditis elegans, GI115532456, Length=286, Percent_Identity=35.6643356643357, Blast_Score=168, Evalue=3e-42, Organism=Caenorhabditis elegans, GI17531885, Length=286, Percent_Identity=35.6643356643357, Blast_Score=167, Evalue=4e-42, Organism=Caenorhabditis elegans, GI71982224, Length=298, Percent_Identity=31.5436241610738, Blast_Score=147, Evalue=8e-36, Organism=Caenorhabditis elegans, GI212645202, Length=286, Percent_Identity=31.1188811188811, Blast_Score=122, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003703 [H]
Pfam domain/function: PF02551 Acyl_CoA_thio [H]
EC number: 3.1.2.- [C]
Molecular weight: Translated: 32947; Mature: 32816
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVLKDLLSQLNLEKLEENLFRGNNQDLGTGRVFGGQVMGQAISAAKDTVSENRNVHSF CHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHHHHHHCCCCEEEE HSYFLLAGETDKPIVYDVERIRDGKSLSTRRVKAVQNGKAIFYMTASFKNREHGFEHQLE EEEEEEECCCCCCEEEEHHHHCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCC MPDVPKPEDLISEQEMSLLHTDTLPESIRDKLISEKPIEMRPVTFVNPSNPEVESAKRFI CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCHHCCCEEE WCRANGKMPDDLRIHRYLLAYASDFNFLPTALQPHGVSYLSPGMQVVTIDHSMWFHHDFR EEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCEEEEEECCEEEEECCC LDDWLLYVVESPAASDGCALVKGHFYTREGKLVASTIQEGLIRQRKVRV CCCEEEEEEECCCCCCCEEEEECEEEECCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SKVLKDLLSQLNLEKLEENLFRGNNQDLGTGRVFGGQVMGQAISAAKDTVSENRNVHSF HHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHHHHHHCCCCEEEE HSYFLLAGETDKPIVYDVERIRDGKSLSTRRVKAVQNGKAIFYMTASFKNREHGFEHQLE EEEEEEECCCCCCEEEEHHHHCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCC MPDVPKPEDLISEQEMSLLHTDTLPESIRDKLISEKPIEMRPVTFVNPSNPEVESAKRFI CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCHHCCCEEE WCRANGKMPDDLRIHRYLLAYASDFNFLPTALQPHGVSYLSPGMQVVTIDHSMWFHHDFR EEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCEEEEEECCEEEEECCC LDDWLLYVVESPAASDGCALVKGHFYTREGKLVASTIQEGLIRQRKVRV CCCEEEEEEECCCCCCCEEEEECEEEECCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: acyl-CoA thioesters [C]
Specific reaction: Hydrolyzes a broad range of acyl-CoA thioesters [C]
General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]