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The map label for this gene is hoxX [H]

Identifier: 119944959

GI number: 119944959

Start: 1511913

End: 1512773

Strand: Reverse

Name: hoxX [H]

Synonym: Ping_1208

Alternate gene names: 119944959

Gene position: 1512773-1511913 (Counterclockwise)

Preceding gene: 119944960

Following gene: 119944958

Centisome position: 33.18

GC content: 44.6

Gene sequence:

>861_bases
ATGCAGGAAATCAGCTATCAGGCAGACAATAAAGTAGGACATATTAGATTTCCTATCCATAACGGCGCGATGGATTTAAG
CCATTGCCGGCAGCTTTTACAGACCATTGAATTTGCCAAAGAAGATGATGCCTGCAAAGTCATTATCCTCTGGGGAGGGC
CTGACTTTTTTTCCAACGGGATTGACTTAAATGCCGTTCACCTGCAATACAATGCCTCTATTCTTACTTATAAAAACCTC
AAAGCATTAAACAAAATAGTGCATGCTGTTTTAACTGCCGACACTAAATTGGTGATTAGCGCCCTGCAGGGATCAGCTTC
TGCTGGCGGCGTGATGCTGGCGATTGCAGCAGACTTGCGCTATGCCCGGCAAAACATAGTACTCAATCCATCTTATGCTA
ATTTAGGGCTGTGCGGCTCTGAGTATTGGTCGGTACTTTTACCCGCTATTATAGGCGTTGGCTTTACCCAAAAACTGCTC
TATGAGGCCAGCCCAATCTCAGCTACTGACGCCTTACGCCTGGGATTAATTCATCAGCTTATTGGCGGTGAACCAGATGC
TTTTCAAGATAATATAACCGCCAAAGCAGAATATTTAGCCTCAACTAATATTAATGCCCGGCTGGCAGCTAAAAGCGTGC
TAAATCATCACTTACTTGCACAGATGGAAACGCAGGTAAAACTGGAATTAGAAAAGATGAAAGACTGCTGTAATCATCCG
GAATTTGAATTGGCAAGAGCCCATTTTGTAGAAAAGAACGGCCACCCGCAGCCACTATTTCTAAACGCCGCTGCAGGCAA
TATCAGGCAGAACCACCAACGAGATAACAAGCAACCGGATGACCAGGATGACAACAAATAA

Upstream 100 bases:

>100_bases
ATTTCGCGCATGGCTGACATCACTGAAAATATTAAAATCAGGCCGGCGGATCTGCTGGCACAATCAGCTAGCACAATCAC
CAGGGTAATAGTCAAATAAT

Downstream 100 bases:

>100_bases
GAACAAGATGACAATAAGTAAAAAATTCAATCCGGATGCCTTTAAAGATCGGGAGATAGTTAATAAACTGGCGCAGGAGA
TAAAATTAATCGCTGCGCAA

Product: enoyl-CoA hydratase/isomerase

Products: L-Carnitine.; L-carnitinyl-CoA [C]

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MQEISYQADNKVGHIRFPIHNGAMDLSHCRQLLQTIEFAKEDDACKVIILWGGPDFFSNGIDLNAVHLQYNASILTYKNL
KALNKIVHAVLTADTKLVISALQGSASAGGVMLAIAADLRYARQNIVLNPSYANLGLCGSEYWSVLLPAIIGVGFTQKLL
YEASPISATDALRLGLIHQLIGGEPDAFQDNITAKAEYLASTNINARLAAKSVLNHHLLAQMETQVKLELEKMKDCCNHP
EFELARAHFVEKNGHPQPLFLNAAAGNIRQNHQRDNKQPDDQDDNK

Sequences:

>Translated_286_residues
MQEISYQADNKVGHIRFPIHNGAMDLSHCRQLLQTIEFAKEDDACKVIILWGGPDFFSNGIDLNAVHLQYNASILTYKNL
KALNKIVHAVLTADTKLVISALQGSASAGGVMLAIAADLRYARQNIVLNPSYANLGLCGSEYWSVLLPAIIGVGFTQKLL
YEASPISATDALRLGLIHQLIGGEPDAFQDNITAKAEYLASTNINARLAAKSVLNHHLLAQMETQVKLELEKMKDCCNHP
EFELARAHFVEKNGHPQPLFLNAAAGNIRQNHQRDNKQPDDQDDNK
>Mature_286_residues
MQEISYQADNKVGHIRFPIHNGAMDLSHCRQLLQTIEFAKEDDACKVIILWGGPDFFSNGIDLNAVHLQYNASILTYKNL
KALNKIVHAVLTADTKLVISALQGSASAGGVMLAIAADLRYARQNIVLNPSYANLGLCGSEYWSVLLPAIIGVGFTQKLL
YEASPISATDALRLGLIHQLIGGEPDAFQDNITAKAEYLASTNINARLAAKSVLNHHLLAQMETQVKLELEKMKDCCNHP
EFELARAHFVEKNGHPQPLFLNAAAGNIRQNHQRDNKQPDDQDDNK

Specific function: Involved in the post-translational processing of the hydrogenase large subunit [H]

COG id: COG1024

COG function: function code I; Enoyl-CoA hydratase/carnithine racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001753
- InterPro:   IPR005793
- InterPro:   IPR002376
- InterPro:   IPR011034
- InterPro:   IPR015518
- InterPro:   IPR009188 [H]

Pfam domain/function: PF00378 ECH; PF02911 Formyl_trans_C; PF00551 Formyl_trans_N [H]

EC number: 4.2.1.- [C]

Molecular weight: Translated: 31503; Mature: 31503

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: PS00166 ENOYL_COA_HYDRATASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEISYQADNKVGHIRFPIHNGAMDLSHCRQLLQTIEFAKEDDACKVIILWGGPDFFSNG
CCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHCCC
IDLNAVHLQYNASILTYKNLKALNKIVHAVLTADTKLVISALQGSASAGGVMLAIAADLR
CCEEEEEEEECCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEEHHHHH
YARQNIVLNPSYANLGLCGSEYWSVLLPAIIGVGFTQKLLYEASPISATDALRLGLIHQL
HHHHCEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHH
IGGEPDAFQDNITAKAEYLASTNINARLAAKSVLNHHLLAQMETQVKLELEKMKDCCNHP
HCCCCCCHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EFELARAHFVEKNGHPQPLFLNAAAGNIRQNHQRDNKQPDDQDDNK
CHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MQEISYQADNKVGHIRFPIHNGAMDLSHCRQLLQTIEFAKEDDACKVIILWGGPDFFSNG
CCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHCCC
IDLNAVHLQYNASILTYKNLKALNKIVHAVLTADTKLVISALQGSASAGGVMLAIAADLR
CCEEEEEEEECCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEEHHHHH
YARQNIVLNPSYANLGLCGSEYWSVLLPAIIGVGFTQKLLYEASPISATDALRLGLIHQL
HHHHCEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHH
IGGEPDAFQDNITAKAEYLASTNINARLAAKSVLNHHLLAQMETQVKLELEKMKDCCNHP
HCCCCCCHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EFELARAHFVEKNGHPQPLFLNAAAGNIRQNHQRDNKQPDDQDDNK
CHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: D-Carnitine; D-carnitinyl-CoA [C]

Specific reaction: D-Carnitine = L-Carnitine. D-carnitinyl-CoA = L-carnitinyl-CoA [C]

General reaction: Isomerases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8510650; 12597275 [H]