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The map label for this gene is hoxX [H]

Identifier: 119944960

GI number: 119944960

Start: 1512775

End: 1513629

Strand: Reverse

Name: hoxX [H]

Synonym: Ping_1209

Alternate gene names: 119944960

Gene position: 1513629-1512775 (Counterclockwise)

Preceding gene: 119944961

Following gene: 119944959

Centisome position: 33.2

GC content: 44.68

Gene sequence:

>855_bases
ATGGAGGATGGGTTATCAGTTAAATTGGCCAATAAAAAATGTCTTTTCCTGTGTTCTACTTTTAATGGATTAAGTCAAAA
ATTTTGGGTTAATTTCTCCTCTTTATTTAAAGAAAGCCATTTAATGCTGAGAATTAATCCAGCCGCTATTAAAGCATTTC
AGCCGCACCTGATAATTTGCCCTTTTTTAGAGGACTTTATTCCCGATCAAATCTGGTCTGCAATCCCTTGTTTTATTGTT
CATCCTGGCCCTGCGGACGAAGCTGGCCCAAGCGTATTAAACTGGGCTATTTTAGAAGGCAAAACCCATTGGTCAGTCAC
TATTATTCAAGCCGATGCGCAGTGGGATGCAGGTCCCGTTTGGGCGCAGGCCAAATTCAAACTGCCGGTGGCCTCCTTAT
CTAGTATCTATCGCCAACAAGTATCGGACACTGCGCTGCAACTGCTTCCCCAGGCATTAAGCCGTTATTATTCAGAAAAA
AAACCACTGTTAACTGCCCCGCCCGTTTATAGAATAAGAATAACACAGCAGCAACTGCGCATAATCTGGGATCGACCAAG
CGCTGAAATCATTAAAAAAATTCATGCAGGAGACAGTAAGCCCGGCGCCCCCGCAATGATAGAAGACAATGACTACCTAC
TTTTCGGTGCACAAACCGGCGAATCAACGCCGCATTTAAGTGCCTTCCGACCAGGAGAAATCATCACTCAGCAGGATGGT
CAAATCTGTGTCAGGACATCGGATGGCTGTGTGTGGATTTCGCGCATGGCTGACATCACTGAAAATATTAAAATCAGGCC
GGCGGATCTGCTGGCACAATCAGCTAGCACAATCACCAGGGTAATAGTCAAATAA

Upstream 100 bases:

>100_bases
TATTAAATCAACATATCGGCAAGGTGACCCTTGAAACCAGTATCGGCAGTTTAAGAGTAGTCGATATGCCGCTGGGCGAG
CAATTACCGAGGATCTGTTA

Downstream 100 bases:

>100_bases
TATGCAGGAAATCAGCTATCAGGCAGACAATAAAGTAGGACATATTAGATTTCCTATCCATAACGGCGCGATGGATTTAA
GCCATTGCCGGCAGCTTTTA

Product: formyl transferase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MEDGLSVKLANKKCLFLCSTFNGLSQKFWVNFSSLFKESHLMLRINPAAIKAFQPHLIICPFLEDFIPDQIWSAIPCFIV
HPGPADEAGPSVLNWAILEGKTHWSVTIIQADAQWDAGPVWAQAKFKLPVASLSSIYRQQVSDTALQLLPQALSRYYSEK
KPLLTAPPVYRIRITQQQLRIIWDRPSAEIIKKIHAGDSKPGAPAMIEDNDYLLFGAQTGESTPHLSAFRPGEIITQQDG
QICVRTSDGCVWISRMADITENIKIRPADLLAQSASTITRVIVK

Sequences:

>Translated_284_residues
MEDGLSVKLANKKCLFLCSTFNGLSQKFWVNFSSLFKESHLMLRINPAAIKAFQPHLIICPFLEDFIPDQIWSAIPCFIV
HPGPADEAGPSVLNWAILEGKTHWSVTIIQADAQWDAGPVWAQAKFKLPVASLSSIYRQQVSDTALQLLPQALSRYYSEK
KPLLTAPPVYRIRITQQQLRIIWDRPSAEIIKKIHAGDSKPGAPAMIEDNDYLLFGAQTGESTPHLSAFRPGEIITQQDG
QICVRTSDGCVWISRMADITENIKIRPADLLAQSASTITRVIVK
>Mature_284_residues
MEDGLSVKLANKKCLFLCSTFNGLSQKFWVNFSSLFKESHLMLRINPAAIKAFQPHLIICPFLEDFIPDQIWSAIPCFIV
HPGPADEAGPSVLNWAILEGKTHWSVTIIQADAQWDAGPVWAQAKFKLPVASLSSIYRQQVSDTALQLLPQALSRYYSEK
KPLLTAPPVYRIRITQQQLRIIWDRPSAEIIKKIHAGDSKPGAPAMIEDNDYLLFGAQTGESTPHLSAFRPGEIITQQDG
QICVRTSDGCVWISRMADITENIKIRPADLLAQSASTITRVIVK

Specific function: Involved in the post-translational processing of the hydrogenase large subunit [H]

COG id: COG0223

COG function: function code J; Methionyl-tRNA formyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001753
- InterPro:   IPR005793
- InterPro:   IPR002376
- InterPro:   IPR011034
- InterPro:   IPR015518
- InterPro:   IPR009188 [H]

Pfam domain/function: PF00378 ECH; PF02911 Formyl_trans_C; PF00551 Formyl_trans_N [H]

EC number: NA

Molecular weight: Translated: 31666; Mature: 31666

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDGLSVKLANKKCLFLCSTFNGLSQKFWVNFSSLFKESHLMLRINPAAIKAFQPHLIIC
CCCCCEEEECCCEEEEEEECCCCCCHHEEECHHHHHCCCCEEEEECHHHHHCCCCCEEEC
PFLEDFIPDQIWSAIPCFIVHPGPADEAGPSVLNWAILEGKTHWSVTIIQADAQWDAGPV
HHHHHCCHHHHHHHCCEEEECCCCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCCCCE
WAQAKFKLPVASLSSIYRQQVSDTALQLLPQALSRYYSEKKPLLTAPPVYRIRITQQQLR
EEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCEEEEEEEHHHEE
IIWDRPSAEIIKKIHAGDSKPGAPAMIEDNDYLLFGAQTGESTPHLSAFRPGEIITQQDG
EEECCCHHHHHHHHHCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCEEEECCC
QICVRTSDGCVWISRMADITENIKIRPADLLAQSASTITRVIVK
CEEEEECCCEEEEHHHHHHHHCCEECHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEDGLSVKLANKKCLFLCSTFNGLSQKFWVNFSSLFKESHLMLRINPAAIKAFQPHLIIC
CCCCCEEEECCCEEEEEEECCCCCCHHEEECHHHHHCCCCEEEEECHHHHHCCCCCEEEC
PFLEDFIPDQIWSAIPCFIVHPGPADEAGPSVLNWAILEGKTHWSVTIIQADAQWDAGPV
HHHHHCCHHHHHHHCCEEEECCCCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCCCCE
WAQAKFKLPVASLSSIYRQQVSDTALQLLPQALSRYYSEKKPLLTAPPVYRIRITQQQLR
EEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCEEEEEEEHHHEE
IIWDRPSAEIIKKIHAGDSKPGAPAMIEDNDYLLFGAQTGESTPHLSAFRPGEIITQQDG
EEECCCHHHHHHHHHCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCEEEECCC
QICVRTSDGCVWISRMADITENIKIRPADLLAQSASTITRVIVK
CEEEEECCCEEEEHHHHHHHHCCEECHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8510650; 12597275 [H]