| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is 119944830
Identifier: 119944830
GI number: 119944830
Start: 1346184
End: 1346573
Strand: Reverse
Name: 119944830
Synonym: Ping_1072
Alternate gene names: NA
Gene position: 1346573-1346184 (Counterclockwise)
Preceding gene: 119944831
Following gene: 119944827
Centisome position: 29.53
GC content: 35.64
Gene sequence:
>390_bases TTGAATTTTATGCAAACCCGACACTATCAATTGCTTGCCAAAACTGGATATTTTGGATTACTATTGCTCATTCCTGTTTG GCATTTGTGGTTATCTCCACCTTCGTTAAATATAAACCCCTGGCTAGTTACCTGTATCTGGTTTATTCCCCTGTTATTTC CCTTAATGGGTATTTTACAGAATAACCCTTATACCTATGCATGGTCTGGTTTTCTGGCATTATTATATTTAATGCACAGC ATTGTTATCTTAATGAATGAACCAGGTGAATTAATATTGGCGAGTATAGAATTATTGCTAGCTGGGTTTTTCTTAACGGG AAATATCTATTTTGCAAAATACAGGGGTCGTGAATTAGGCTTAAGCATTCGTAAGAAAAAGAGTCACTAG
Upstream 100 bases:
>100_bases TTTAATAAGTTGTGTCTTATACGGTCAAAACCGACACTGCTTTGGCTGTTTTACATGGTGCGATTAACTAAGCGTTATCA TATAAAACTCTTTTAATAAG
Downstream 100 bases:
>100_bases AAAAGAGTCAACTTCCCTCACTTCAAGATGCTGCATCTTGAAGTGCTTTATCCCCAAGCTTTATAAGACTAATACCTCTT TGACAAAGGGAATCGTTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MNFMQTRHYQLLAKTGYFGLLLLIPVWHLWLSPPSLNINPWLVTCIWFIPLLFPLMGILQNNPYTYAWSGFLALLYLMHS IVILMNEPGELILASIELLLAGFFLTGNIYFAKYRGRELGLSIRKKKSH
Sequences:
>Translated_129_residues MNFMQTRHYQLLAKTGYFGLLLLIPVWHLWLSPPSLNINPWLVTCIWFIPLLFPLMGILQNNPYTYAWSGFLALLYLMHS IVILMNEPGELILASIELLLAGFFLTGNIYFAKYRGRELGLSIRKKKSH >Mature_129_residues MNFMQTRHYQLLAKTGYFGLLLLIPVWHLWLSPPSLNINPWLVTCIWFIPLLFPLMGILQNNPYTYAWSGFLALLYLMHS IVILMNEPGELILASIELLLAGFFLTGNIYFAKYRGRELGLSIRKKKSH
Specific function: Unknown
COG id: COG3308
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14971; Mature: 14971
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFMQTRHYQLLAKTGYFGLLLLIPVWHLWLSPPSLNINPWLVTCIWFIPLLFPLMGILQ CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC NNPYTYAWSGFLALLYLMHSIVILMNEPGELILASIELLLAGFFLTGNIYFAKYRGRELG CCCCEEHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCC LSIRKKKSH CCHHCCCCC >Mature Secondary Structure MNFMQTRHYQLLAKTGYFGLLLLIPVWHLWLSPPSLNINPWLVTCIWFIPLLFPLMGILQ CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC NNPYTYAWSGFLALLYLMHSIVILMNEPGELILASIELLLAGFFLTGNIYFAKYRGRELG CCCCEEHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCC LSIRKKKSH CCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA