| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is yfgD [H]
Identifier: 119944831
GI number: 119944831
Start: 1346819
End: 1347175
Strand: Reverse
Name: yfgD [H]
Synonym: Ping_1073
Alternate gene names: 119944831
Gene position: 1347175-1346819 (Counterclockwise)
Preceding gene: 119944832
Following gene: 119944830
Centisome position: 29.55
GC content: 38.66
Gene sequence:
>357_bases ATGACTGGCATTATTATTTATCACAACCCAATTTGCTCTAAAAGTCGCACAACGCTGGCACTACTGAAAGAGCATAGCGA TAACGATAACATAAAGGTAATAAAGTACCTTGAAACACCGCCAACGGTTGAACAACTGCAAGACATCATTAATCGATTAG ATTTTGACTCTGCTCGTCAACTGATGCGCTGCAATGAAGATTTGTATAAAACCTTAAAGCTCAAAGATCAAAACAATGAG CAATTGTTATTACAAGCGATGGTGGAAAATCCTAAATTAATTGAACGCCCGATTGTATTAGCGAATGGAAAAGCGATCAT TGGTCGCCCTCCCGAGTCGGTATTAACAATCCTTTAA
Upstream 100 bases:
>100_bases ACCATCGACCCTGACAAACTGGGAGATTATATTGCTATTTGGCCCGCCGAATAATTATCTCTTGTAAAAAATATAACAAA CTAATTCGTAAGGGAAAAAG
Downstream 100 bases:
>100_bases TCGCTCGCTTAACGTCAAACCCGCACGGCTTTGGCTATAAAGGTATCAACAAGGATTATCATTTTTAATAAGTTGTGCCT TATGCGGTCAAAGCCAAAAC
Product: arsenate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MTGIIIYHNPICSKSRTTLALLKEHSDNDNIKVIKYLETPPTVEQLQDIINRLDFDSARQLMRCNEDLYKTLKLKDQNNE QLLLQAMVENPKLIERPIVLANGKAIIGRPPESVLTIL
Sequences:
>Translated_118_residues MTGIIIYHNPICSKSRTTLALLKEHSDNDNIKVIKYLETPPTVEQLQDIINRLDFDSARQLMRCNEDLYKTLKLKDQNNE QLLLQAMVENPKLIERPIVLANGKAIIGRPPESVLTIL >Mature_117_residues TGIIIYHNPICSKSRTTLALLKEHSDNDNIKVIKYLETPPTVEQLQDIINRLDFDSARQLMRCNEDLYKTLKLKDQNNEQ LLLQAMVENPKLIERPIVLANGKAIIGRPPESVLTIL
Specific function: Unknown
COG id: COG1393
COG function: function code P; Arsenate reductase and related proteins, glutaredoxin family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArsC family [H]
Homologues:
Organism=Escherichia coli, GI1788841, Length=116, Percent_Identity=58.6206896551724, Blast_Score=126, Evalue=3e-31, Organism=Escherichia coli, GI1789918, Length=119, Percent_Identity=40.3361344537815, Blast_Score=75, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006659 - InterPro: IPR006660 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF03960 ArsC [H]
EC number: NA
Molecular weight: Translated: 13494; Mature: 13363
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGIIIYHNPICSKSRTTLALLKEHSDNDNIKVIKYLETPPTVEQLQDIINRLDFDSARQ CCEEEEEECCCCCCCCHHHEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCHHHHH LMRCNEDLYKTLKLKDQNNEQLLLQAMVENPKLIERPIVLANGKAIIGRPPESVLTIL HHHHCHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHCCEEEECCCEEECCCCHHHEECC >Mature Secondary Structure TGIIIYHNPICSKSRTTLALLKEHSDNDNIKVIKYLETPPTVEQLQDIINRLDFDSARQ CEEEEEECCCCCCCCHHHEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCHHHHH LMRCNEDLYKTLKLKDQNNEQLLLQAMVENPKLIERPIVLANGKAIIGRPPESVLTIL HHHHCHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHCCEEEECCCEEECCCCHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 10493123 [H]