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The map label for this gene is recO

Identifier: 119944414

GI number: 119944414

Start: 827144

End: 827845

Strand: Direct

Name: recO

Synonym: Ping_0642

Alternate gene names: 119944414

Gene position: 827144-827845 (Clockwise)

Preceding gene: 119944413

Following gene: 119944415

Centisome position: 18.14

GC content: 40.74

Gene sequence:

>702_bases
ATGTCCATTGAGTGCCACAATGCTTTTATTTTACATCGACGTCCTTATCGGGAAACCAGTCAGTTAATTGATCTTTTCTG
TCAGGACGTTGGTAAAGTAAGCCTGGTTTATAAAGGTGGGCGCAGTAGTACGCGTATGAGACGTGGTACGGCGCAACCTT
TTACTCTATTGCAAGTCAGTTATTTTGGCCGCGGCAGTTTAAAAACAGTTAAATCCTTTGAAGCGCAAACCCAAGTTGTC
CCATTAGTCGGGCAGCGACTTTTTCTGGCGATGTATATCAACGAATTATTGTATCGTTTATTGCAGGCAGAAACGGCCTG
CGATGGTTTATTTGAGTGTTATCAGCAAACCTTATTAGCTATTGCCGGCGCTGTGGATCCGCAAATAGCATTGCGTCTTT
TTGAGTTGACACTGATTGAAACCTTAGGTTACGGGGTTAATTTTAGCGAAGATATTTATAGCGGTGAATTAATTGAAAGC
GGTTACGAATATCAATATCAGCATCAAGCAGGTTTTTTTGCTAAACAAGCTATTCATAAACAGCATGACGTTTACAGTGG
GCAGGATATACTTGCATTAGCACAACGTGATTTTTCAAATCAAAATGTCTTAAAATCAGCAAAACGATTTTGCCGGCAAG
CATTAGCTAATCTCTTAGGTGGCAAACCATTACATAGTCGGGCACTCTTTACGGCTAAATAA

Upstream 100 bases:

>100_bases
TGATAGCTGATAGCCGACAGCTGATAGCCGACAGCTGATAGCCGACAGCTGATAGCCAACAGCTGACAGCTTCTCGCCCG
CCACTTTCTGAGGTTATTGA

Downstream 100 bases:

>100_bases
ACAATAAAGGATAATTTGTAAATGAGTCAAATTTTACTTGGCGTTAATATCGATCATATCGCAACATTACGTAACGCTCG
TGGTACTTGTTATCCTGAGC

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MSIECHNAFILHRRPYRETSQLIDLFCQDVGKVSLVYKGGRSSTRMRRGTAQPFTLLQVSYFGRGSLKTVKSFEAQTQVV
PLVGQRLFLAMYINELLYRLLQAETACDGLFECYQQTLLAIAGAVDPQIALRLFELTLIETLGYGVNFSEDIYSGELIES
GYEYQYQHQAGFFAKQAIHKQHDVYSGQDILALAQRDFSNQNVLKSAKRFCRQALANLLGGKPLHSRALFTAK

Sequences:

>Translated_233_residues
MSIECHNAFILHRRPYRETSQLIDLFCQDVGKVSLVYKGGRSSTRMRRGTAQPFTLLQVSYFGRGSLKTVKSFEAQTQVV
PLVGQRLFLAMYINELLYRLLQAETACDGLFECYQQTLLAIAGAVDPQIALRLFELTLIETLGYGVNFSEDIYSGELIES
GYEYQYQHQAGFFAKQAIHKQHDVYSGQDILALAQRDFSNQNVLKSAKRFCRQALANLLGGKPLHSRALFTAK
>Mature_232_residues
SIECHNAFILHRRPYRETSQLIDLFCQDVGKVSLVYKGGRSSTRMRRGTAQPFTLLQVSYFGRGSLKTVKSFEAQTQVVP
LVGQRLFLAMYINELLYRLLQAETACDGLFECYQQTLLAIAGAVDPQIALRLFELTLIETLGYGVNFSEDIYSGELIESG
YEYQYQHQAGFFAKQAIHKQHDVYSGQDILALAQRDFSNQNVLKSAKRFCRQALANLLGGKPLHSRALFTAK

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

Organism=Escherichia coli, GI2367140, Length=227, Percent_Identity=43.6123348017621, Blast_Score=184, Evalue=3e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_PSYIN (A1SSN0)

Other databases:

- EMBL:   CP000510
- RefSeq:   YP_942094.1
- ProteinModelPortal:   A1SSN0
- STRING:   A1SSN0
- GeneID:   4626840
- GenomeReviews:   CP000510_GR
- KEGG:   pin:Ping_0642
- eggNOG:   COG1381
- HOGENOM:   HBG645116
- OMA:   SILQPFQ
- PhylomeDB:   A1SSN0
- BioCyc:   PING357804:PING_0642-MONOMER
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 26349; Mature: 26217

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIECHNAFILHRRPYRETSQLIDLFCQDVGKVSLVYKGGRSSTRMRRGTAQPFTLLQVS
CCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHCCCCCCEEEEEEE
YFGRGSLKTVKSFEAQTQVVPLVGQRLFLAMYINELLYRLLQAETACDGLFECYQQTLLA
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAGAVDPQIALRLFELTLIETLGYGVNFSEDIYSGELIESGYEYQYQHQAGFFAKQAIHK
HHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHCCCCEEEHHHHHHHHHHHHHH
QHDVYSGQDILALAQRDFSNQNVLKSAKRFCRQALANLLGGKPLHSRALFTAK
HHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECC
>Mature Secondary Structure 
SIECHNAFILHRRPYRETSQLIDLFCQDVGKVSLVYKGGRSSTRMRRGTAQPFTLLQVS
CCCCCCEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHCCCCCCEEEEEEE
YFGRGSLKTVKSFEAQTQVVPLVGQRLFLAMYINELLYRLLQAETACDGLFECYQQTLLA
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAGAVDPQIALRLFELTLIETLGYGVNFSEDIYSGELIESGYEYQYQHQAGFFAKQAIHK
HHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHCCCCEEEHHHHHHHHHHHHHH
QHDVYSGQDILALAQRDFSNQNVLKSAKRFCRQALANLLGGKPLHSRALFTAK
HHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA