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The map label for this gene is glcA [H]

Identifier: 119944331

GI number: 119944331

Start: 721285

End: 722634

Strand: Reverse

Name: glcA [H]

Synonym: Ping_0558

Alternate gene names: 119944331

Gene position: 722634-721285 (Counterclockwise)

Preceding gene: 119944333

Following gene: 119944330

Centisome position: 15.85

GC content: 43.78

Gene sequence:

>1350_bases
ATGACATTACAGCTCCAGAAAATGTATTTTTGTATTGGTCAGAAACTACAAAAATCACGGACAACTCTTTTAGCAGCTTT
ATTAATGCTCAGCTTCAGCAGCTCGGCAATGGCTGGCTGGGAACTGCAGTGGATTGATAAATTTGATGGAACAAGTGTTA
ACTGGGATAACTGGACCGCGCAGACACAAGCCAACTATAACAATGAAGTACAGTGCTATACCAATGATGACAGCTCGGTG
AATAAAAACTATGATGTTTCGGACGGCACCCTGAAAATTATTGCCCGTAAACAAAACATTAATTGTCCCGGCTTAGGCGG
CACGCAAAAAAGCTGGACCTCGGGCCGTTTAAACAGCAAAGATAAAAACGAATTTCTTTATGGACGGATAGAATCAAGAA
TCAAATTCCACAATTTAGAAGGTGGTACCTGGCCAGCATTCTGGATGCTGGAAAATCGTATTGCTGAGCAACCTGTTAAG
GGTGATGGTGACTCTATTAACTGGCCCAATGCAGGGGCTGGCGAAATTGATGTCTGGGAATGGTTTTCTAACGCACCTAA
TACTTATATCACTAACTTCTTTAACACCGAAAGCTGTGCTGGTGAGACGCTGTATAGCTACCCGAACGGTGGACCTGATG
TACAAAACTGGCACAACTACGCACTGGAATGGAGCAAAGATAACACCTCTTTTTACATTGATGACATTCTGGTTGTCTCA
CAAGATATGAGTAGTTGTAATCAATATCAAGAACCAATGTTTGTGCTGCTCAATGTCGCAATGGGTGGCAACTTAGGTGG
CAACATCAACCCAAGCCTCACCCAAGCCACAATGGAAATCGACTATGTTGCCCACTGTCAACCTTCTGCTGCCAACAACG
CAACTTACTGCAATCAAGCACTTGCCGAGCAAAATAATGGTTTGCCCGAGGTCAGCATCAAGATCACTCAAAACGGGTAC
ACTATTACTGATATTAACCCCGATAATGGTTTAGTCACACTCAGCGCACAAACCGGCAATATAAATGCAGACAGCAGTTA
CAGCTATGACTGGTATACCAGTGGCCTGGCCAGCCCGATCATAACAGGGAATCAAATAAACTTTGACCCGTCTTCAATGG
TTAATGGTTATTATTATGTGTCTGTTATCCTGACGGACGATCAGAATCCCACACAGACAGATAGAGATGCGCAAACACTT
AAAGTGATATCGGAGTCAATATCCACCAGCAATACAATTAATGCCAACAGTACGGGTGGTAGTATAAGCGCAGGCATTTT
ATTATTTTTAGGTTTATTGGGCTTGTTCCGCGCCCGGCACAGCCTCCCCCATCAAAGCGCAGGCAAATAA

Upstream 100 bases:

>100_bases
ATAAAGAAAGCGCTTACTCTTGGTCATAAGACATGTAAAAATAGATCCTTAACCCGCAACTTAACAGACCATTAATAGTT
AATAAATTTACGAGGTTATA

Downstream 100 bases:

>100_bases
AGAACGGAACATGAGTAACACTTCCTGGAGTGTAGATAATATTGTTTTAGAAGAACCAGAAATTGTTACCTTCCCAATTT
TATTAGCATCGTGAGTGCTA

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: (1->3)-beta-glucan endohydrolase; (1->3)-beta-glucanase A1 [H]

Number of amino acids: Translated: 449; Mature: 448

Protein sequence:

>449_residues
MTLQLQKMYFCIGQKLQKSRTTLLAALLMLSFSSSAMAGWELQWIDKFDGTSVNWDNWTAQTQANYNNEVQCYTNDDSSV
NKNYDVSDGTLKIIARKQNINCPGLGGTQKSWTSGRLNSKDKNEFLYGRIESRIKFHNLEGGTWPAFWMLENRIAEQPVK
GDGDSINWPNAGAGEIDVWEWFSNAPNTYITNFFNTESCAGETLYSYPNGGPDVQNWHNYALEWSKDNTSFYIDDILVVS
QDMSSCNQYQEPMFVLLNVAMGGNLGGNINPSLTQATMEIDYVAHCQPSAANNATYCNQALAEQNNGLPEVSIKITQNGY
TITDINPDNGLVTLSAQTGNINADSSYSYDWYTSGLASPIITGNQINFDPSSMVNGYYYVSVILTDDQNPTQTDRDAQTL
KVISESISTSNTINANSTGGSISAGILLFLGLLGLFRARHSLPHQSAGK

Sequences:

>Translated_449_residues
MTLQLQKMYFCIGQKLQKSRTTLLAALLMLSFSSSAMAGWELQWIDKFDGTSVNWDNWTAQTQANYNNEVQCYTNDDSSV
NKNYDVSDGTLKIIARKQNINCPGLGGTQKSWTSGRLNSKDKNEFLYGRIESRIKFHNLEGGTWPAFWMLENRIAEQPVK
GDGDSINWPNAGAGEIDVWEWFSNAPNTYITNFFNTESCAGETLYSYPNGGPDVQNWHNYALEWSKDNTSFYIDDILVVS
QDMSSCNQYQEPMFVLLNVAMGGNLGGNINPSLTQATMEIDYVAHCQPSAANNATYCNQALAEQNNGLPEVSIKITQNGY
TITDINPDNGLVTLSAQTGNINADSSYSYDWYTSGLASPIITGNQINFDPSSMVNGYYYVSVILTDDQNPTQTDRDAQTL
KVISESISTSNTINANSTGGSISAGILLFLGLLGLFRARHSLPHQSAGK
>Mature_448_residues
TLQLQKMYFCIGQKLQKSRTTLLAALLMLSFSSSAMAGWELQWIDKFDGTSVNWDNWTAQTQANYNNEVQCYTNDDSSVN
KNYDVSDGTLKIIARKQNINCPGLGGTQKSWTSGRLNSKDKNEFLYGRIESRIKFHNLEGGTWPAFWMLENRIAEQPVKG
DGDSINWPNAGAGEIDVWEWFSNAPNTYITNFFNTESCAGETLYSYPNGGPDVQNWHNYALEWSKDNTSFYIDDILVVSQ
DMSSCNQYQEPMFVLLNVAMGGNLGGNINPSLTQATMEIDYVAHCQPSAANNATYCNQALAEQNNGLPEVSIKITQNGYT
ITDINPDNGLVTLSAQTGNINADSSYSYDWYTSGLASPIITGNQINFDPSSMVNGYYYVSVILTDDQNPTQTDRDAQTLK
VISESISTSNTINANSTGGSISAGILLFLGLLGLFRARHSLPHQSAGK

Specific function: Lysis of cellular walls containing beta-1,3-glucans. Implicated in the defense against fungal pathogens [H]

COG id: COG2273

COG function: function code G; Beta-glucanase/Beta-glucan synthetase

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 16 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008985
- InterPro:   IPR013320
- InterPro:   IPR000757
- InterPro:   IPR008263 [H]

Pfam domain/function: PF00722 Glyco_hydro_16 [H]

EC number: =3.2.1.39 [H]

Molecular weight: Translated: 49610; Mature: 49479

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLQLQKMYFCIGQKLQKSRTTLLAALLMLSFSSSAMAGWELQWIDKFDGTSVNWDNWTA
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCEE
QTQANYNNEVQCYTNDDSSVNKNYDVSDGTLKIIARKQNINCPGLGGTQKSWTSGRLNSK
EEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCC
DKNEFLYGRIESRIKFHNLEGGTWPAFWMLENRIAEQPVKGDGDSINWPNAGAGEIDVWE
CCCCEEEEEEECEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEHHH
WFSNAPNTYITNFFNTESCAGETLYSYPNGGPDVQNWHNYALEWSKDNTSFYIDDILVVS
HHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEEEE
QDMSSCNQYQEPMFVLLNVAMGGNLGGNINPSLTQATMEIDYVAHCQPSAANNATYCNQA
HHHHHHHHHCCCEEEEEEEHCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCHHHHHH
LAEQNNGLPEVSIKITQNGYTITDINPDNGLVTLSAQTGNINADSSYSYDWYTSGLASPI
HHHHCCCCCEEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHCCCCCCC
ITGNQINFDPSSMVNGYYYVSVILTDDQNPTQTDRDAQTLKVISESISTSNTINANSTGG
EECCCCCCCHHHHCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
SISAGILLFLGLLGLFRARHSLPHQSAGK
CHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TLQLQKMYFCIGQKLQKSRTTLLAALLMLSFSSSAMAGWELQWIDKFDGTSVNWDNWTA
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCEE
QTQANYNNEVQCYTNDDSSVNKNYDVSDGTLKIIARKQNINCPGLGGTQKSWTSGRLNSK
EEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCC
DKNEFLYGRIESRIKFHNLEGGTWPAFWMLENRIAEQPVKGDGDSINWPNAGAGEIDVWE
CCCCEEEEEEECEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEHHH
WFSNAPNTYITNFFNTESCAGETLYSYPNGGPDVQNWHNYALEWSKDNTSFYIDDILVVS
HHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEEEE
QDMSSCNQYQEPMFVLLNVAMGGNLGGNINPSLTQATMEIDYVAHCQPSAANNATYCNQA
HHHHHHHHHCCCEEEEEEEHCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCHHHHHH
LAEQNNGLPEVSIKITQNGYTITDINPDNGLVTLSAQTGNINADSSYSYDWYTSGLASPI
HHHHCCCCCEEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHCCCCCCC
ITGNQINFDPSSMVNGYYYVSVILTDDQNPTQTDRDAQTLKVISESISTSNTINANSTGG
EECCCCCCCHHHHCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
SISAGILLFLGLLGLFRARHSLPHQSAGK
CHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2311931 [H]