| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is ybeZ [H]
Identifier: 119944307
GI number: 119944307
Start: 682092
End: 683120
Strand: Reverse
Name: ybeZ [H]
Synonym: Ping_0534
Alternate gene names: 119944307
Gene position: 683120-682092 (Counterclockwise)
Preceding gene: 119944308
Following gene: 119944306
Centisome position: 14.98
GC content: 42.18
Gene sequence:
>1029_bases TTGACTACCAAACTGACTACCGTCTATATTGACTTAGTGCCTGCCGACATAAAACGCTTAGCGATATTATGTGGCGCATT TGATGACAATATCAAACAAGTAGAACGCCGCTTAGGACTTGAAATAATTTATAAAAATGAAAACTTTCAGATTATCGGCG AACATCGTTATGCCCAAGCCTGCAGCGAACTTTTACAGGAATTATATCTGGAGACCTTGCCTGTCAAAGGTAAAATACCT TCGTTATCGGCAGATGATGTGCATCTCGCCCTGCAAAACCTTATCTCGACTCACCGTTTATTAGAAGTAAAATCCATCGA TCAAACATCCACTCAAAGTCTGTCGATTAAAACCAAACGCGGCATTATTAAACCGCGCAGTGAAAATCAAACTAACTATG TGAGCAACATTTTAAAGAGCGACATTAGTTTTGGCGTAGGTCCAGCCGGAACAGGTAAAACCTATTTAGCCGTCGCCTGT GCCATTGAAGCGTTAGAACGCCAGGAAGTACGGCGTATTCTTTTGACCCGCCCTGCGGTTGAAGCAGGTGAAAAATTAGG ATTTTTACCCGGGGATTTATCACAAAAAGTGGATCCTTATTTGCGTCCTCTTTATGACGCACTGTTCGAAATGCTGGGTT TTGAAAAAGTAGAAAAATTGATTGAAAAAAAGGTTATTGAAATAGCCCCTCTAGCGTATATGCGCGGCCGTACGCTAAAT GATGCCTTTATAATTTTGGATGAGAGCCAAAATACAACGATTGAACAGATGAAGATGTTTTTAACCCGCATCGGCTTTAA CTCGACGGCGGTGATTACCGGTGACATCACCCAAATTGATTTACCGCGCCATCAAAAGTCGGGTTTGCGCCATGCGATTG AGGTACTGGCGAATGTTGAAGAGGTCAGTTTTAATTTTTTCCTGGCCGATGATATAGTGCGCCATCCGGTTGTTGCCCGT ATCGTTAAAGCCTATGAAGCCTTTGAGCATACAGCAGAAATAAAAGCCGCTAAAGTGGAAAAAAAATAA
Upstream 100 bases:
>100_bases GCTTTCAAAAGCTCCCTCAGGGGACTCAGAAAAACATGCTGAAGCTTTAGGCTTCTCCTGCGAAGAATCATTTAACTGCT TAATTTAAGGTTTAACTAAT
Downstream 100 bases:
>100_bases TGCAATTATATGTCGATTTACAAATTGCCTGCTCTGATCCTAATGACCTCCCAATGCCGGCATCCTTTGAGAAATGGATT GAAGCGGCTATATTAGGTGG
Product: PhoH family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MTTKLTTVYIDLVPADIKRLAILCGAFDDNIKQVERRLGLEIIYKNENFQIIGEHRYAQACSELLQELYLETLPVKGKIP SLSADDVHLALQNLISTHRLLEVKSIDQTSTQSLSIKTKRGIIKPRSENQTNYVSNILKSDISFGVGPAGTGKTYLAVAC AIEALERQEVRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVEKLIEKKVIEIAPLAYMRGRTLN DAFIILDESQNTTIEQMKMFLTRIGFNSTAVITGDITQIDLPRHQKSGLRHAIEVLANVEEVSFNFFLADDIVRHPVVAR IVKAYEAFEHTAEIKAAKVEKK
Sequences:
>Translated_342_residues MTTKLTTVYIDLVPADIKRLAILCGAFDDNIKQVERRLGLEIIYKNENFQIIGEHRYAQACSELLQELYLETLPVKGKIP SLSADDVHLALQNLISTHRLLEVKSIDQTSTQSLSIKTKRGIIKPRSENQTNYVSNILKSDISFGVGPAGTGKTYLAVAC AIEALERQEVRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVEKLIEKKVIEIAPLAYMRGRTLN DAFIILDESQNTTIEQMKMFLTRIGFNSTAVITGDITQIDLPRHQKSGLRHAIEVLANVEEVSFNFFLADDIVRHPVVAR IVKAYEAFEHTAEIKAAKVEKK >Mature_341_residues TTKLTTVYIDLVPADIKRLAILCGAFDDNIKQVERRLGLEIIYKNENFQIIGEHRYAQACSELLQELYLETLPVKGKIPS LSADDVHLALQNLISTHRLLEVKSIDQTSTQSLSIKTKRGIIKPRSENQTNYVSNILKSDISFGVGPAGTGKTYLAVACA IEALERQEVRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVEKLIEKKVIEIAPLAYMRGRTLND AFIILDESQNTTIEQMKMFLTRIGFNSTAVITGDITQIDLPRHQKSGLRHAIEVLANVEEVSFNFFLADDIVRHPVVARI VKAYEAFEHTAEIKAAKVEKK
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=335, Percent_Identity=68.3582089552239, Blast_Score=451, Evalue=1e-128, Organism=Escherichia coli, GI1787257, Length=205, Percent_Identity=46.8292682926829, Blast_Score=188, Evalue=5e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 38439; Mature: 38308
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKLTTVYIDLVPADIKRLAILCGAFDDNIKQVERRLGLEIIYKNENFQIIGEHRYAQA CCCEEEEEEEEECHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEECCCEEEEECHHHHHH CSELLQELYLETLPVKGKIPSLSADDVHLALQNLISTHRLLEVKSIDQTSTQSLSIKTKR HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHC GIIKPRSENQTNYVSNILKSDISFGVGPAGTGKTYLAVACAIEALERQEVRRILLTRPAV CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH EAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVEKLIEKKVIEIAPLAYMRGRTLN HHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCC DAFIILDESQNTTIEQMKMFLTRIGFNSTAVITGDITQIDLPRHQKSGLRHAIEVLANVE CEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCEEECCCCHHHHHHHHHHHHHHHHH EVSFNFFLADDIVRHPVVARIVKAYEAFEHTAEIKAAKVEKK HHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TTKLTTVYIDLVPADIKRLAILCGAFDDNIKQVERRLGLEIIYKNENFQIIGEHRYAQA CCEEEEEEEEECHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEECCCEEEEECHHHHHH CSELLQELYLETLPVKGKIPSLSADDVHLALQNLISTHRLLEVKSIDQTSTQSLSIKTKR HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHC GIIKPRSENQTNYVSNILKSDISFGVGPAGTGKTYLAVACAIEALERQEVRRILLTRPAV CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH EAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVEKLIEKKVIEIAPLAYMRGRTLN HHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCC DAFIILDESQNTTIEQMKMFLTRIGFNSTAVITGDITQIDLPRHQKSGLRHAIEVLANVE CEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCEEECCCCHHHHHHHHHHHHHHHHH EVSFNFFLADDIVRHPVVARIVKAYEAFEHTAEIKAAKVEKK HHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]