Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

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The map label for this gene is 119944227

Identifier: 119944227

GI number: 119944227

Start: 572757

End: 573893

Strand: Reverse

Name: 119944227

Synonym: Ping_0450

Alternate gene names: NA

Gene position: 573893-572757 (Counterclockwise)

Preceding gene: 119944228

Following gene: 119944226

Centisome position: 12.59

GC content: 35.18

Gene sequence:

>1137_bases
ATGGATATAAATGTAGATATAAATGTAGATATCACCATTATTGGTGGTGGTTTTTTTGGATTATACCTTGCTGAGTATTT
CTCTCGTCTGAATAAAAAAGTGCTTGTTATTGAAAAAGAGAACGATGCGATGCAAAGAGCCTCATATAACAATCAAGCTC
GAGTGCATAACGGCTATCATTATCCACGAAGTGTGCTGACAGCTTTACGGTCACGTATTTCATTTCCACGTTTTGTAGAT
GAATTTAAACCCTGTATTGATAACGATTTCGATAAATATTATATGATTTCAAATCGATTAGGTAAAATCACACCAAATCA
GTTCCAAAAATTTTGCGATCGCATCGGTGCAACACATGAATCTGCACCACCTGAAATTCAACGTTTAATTCAACCTAATA
TGATTGATGGCATATTCAAAGTTAAGGAATTTGCTTTTGATTCTGTTTTATTAAAAAAAACAATGCTTGATCGTATTCAA
AATAGTGGTGTCGATATACTATTTAACCACAACGTGAAGACTATCAAGCAGCATCAATCAACTTCACGACTTGAATTAAA
AATTGATTCTGACACTGAAACTATCAACATATCAAGCAAACAGGTTTACAACTGCACCTATTCATTACTTAATTCAGTAC
TCAATGGTTCAAACATTGAGCTTATCCCTCTTCGACATGAAATGACTGAAATGTGTGTCGTTGATGTGCCCGATGAGTTA
AAAAAAGTCGGGATCACCGTTATGTGTGGTCCCTTTTTTTCAGTTATGCCATTCCCTTCCAAACAAGCTCATTCTTTTAG
CCATGTACGCTATACCCCGCATTATGAATGGGATGATAATAATCAATCTCCCTACGTAGATGCTCATAAGCTTTATAGTG
AAAGCTTTAAACGCAGTGCATGGAAGAAAATGAAATTAGATGCGCAACGATATATCCCTATTTTGGCAGACGTAAAATAC
AAAGAGTCTCTCTGGGAAGTCAAAACAATATTACCAAGAAGTGAAACGGATGATTCTAGACCTATCTTATTTAAAGCTAA
CTATGGCTTACCAGGCTTACACTGTGTAATGGGTGGAAAAATCGATAATATTTACGATGTCATACAAACCATTAATAATT
TAGGGTTGGATGTATAA

Upstream 100 bases:

>100_bases
TGCCTCTGTTTTATTGTTTGGAGAAAACCTCTCAATAATTAATGTAGCTGGGATATTTTTTATTATTATTGGTGTTTGGG
CATTAACGGTGAATTAATAT

Downstream 100 bases:

>100_bases
TGAAAAGTGAAATATTTGTATCTGTCGTTTTGATTGTAAAAAACCAGACAGATAAACTAATAAACTATTTAGATAAACTT
TCCCCCTATTTGAATGAGCA

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: D Amino Acid Oxidase Family Protein

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MDINVDINVDITIIGGGFFGLYLAEYFSRLNKKVLVIEKENDAMQRASYNNQARVHNGYHYPRSVLTALRSRISFPRFVD
EFKPCIDNDFDKYYMISNRLGKITPNQFQKFCDRIGATHESAPPEIQRLIQPNMIDGIFKVKEFAFDSVLLKKTMLDRIQ
NSGVDILFNHNVKTIKQHQSTSRLELKIDSDTETINISSKQVYNCTYSLLNSVLNGSNIELIPLRHEMTEMCVVDVPDEL
KKVGITVMCGPFFSVMPFPSKQAHSFSHVRYTPHYEWDDNNQSPYVDAHKLYSESFKRSAWKKMKLDAQRYIPILADVKY
KESLWEVKTILPRSETDDSRPILFKANYGLPGLHCVMGGKIDNIYDVIQTINNLGLDV

Sequences:

>Translated_378_residues
MDINVDINVDITIIGGGFFGLYLAEYFSRLNKKVLVIEKENDAMQRASYNNQARVHNGYHYPRSVLTALRSRISFPRFVD
EFKPCIDNDFDKYYMISNRLGKITPNQFQKFCDRIGATHESAPPEIQRLIQPNMIDGIFKVKEFAFDSVLLKKTMLDRIQ
NSGVDILFNHNVKTIKQHQSTSRLELKIDSDTETINISSKQVYNCTYSLLNSVLNGSNIELIPLRHEMTEMCVVDVPDEL
KKVGITVMCGPFFSVMPFPSKQAHSFSHVRYTPHYEWDDNNQSPYVDAHKLYSESFKRSAWKKMKLDAQRYIPILADVKY
KESLWEVKTILPRSETDDSRPILFKANYGLPGLHCVMGGKIDNIYDVIQTINNLGLDV
>Mature_378_residues
MDINVDINVDITIIGGGFFGLYLAEYFSRLNKKVLVIEKENDAMQRASYNNQARVHNGYHYPRSVLTALRSRISFPRFVD
EFKPCIDNDFDKYYMISNRLGKITPNQFQKFCDRIGATHESAPPEIQRLIQPNMIDGIFKVKEFAFDSVLLKKTMLDRIQ
NSGVDILFNHNVKTIKQHQSTSRLELKIDSDTETINISSKQVYNCTYSLLNSVLNGSNIELIPLRHEMTEMCVVDVPDEL
KKVGITVMCGPFFSVMPFPSKQAHSFSHVRYTPHYEWDDNNQSPYVDAHKLYSESFKRSAWKKMKLDAQRYIPILADVKY
KESLWEVKTILPRSETDDSRPILFKANYGLPGLHCVMGGKIDNIYDVIQTINNLGLDV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43558; Mature: 43558

Theoretical pI: Translated: 7.88; Mature: 7.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDINVDINVDITIIGGGFFGLYLAEYFSRLNKKVLVIEKENDAMQRASYNNQARVHNGYH
CCEEEEEEEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHCCCCCCEECCCCC
YPRSVLTALRSRISFPRFVDEFKPCIDNDFDKYYMISNRLGKITPNQFQKFCDRIGATHE
CHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCC
SAPPEIQRLIQPNMIDGIFKVKEFAFDSVLLKKTMLDRIQNSGVDILFNHNVKTIKQHQS
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCC
TSRLELKIDSDTETINISSKQVYNCTYSLLNSVLNGSNIELIPLRHEMTEMCVVDVPDEL
CCEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHEEECCCHHH
KKVGITVMCGPFFSVMPFPSKQAHSFSHVRYTPHYEWDDNNQSPYVDAHKLYSESFKRSA
HHCCEEEEECCCHHHCCCCCHHCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
WKKMKLDAQRYIPILADVKYKESLWEVKTILPRSETDDSRPILFKANYGLPGLHCVMGGK
HHHHHCCHHHCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCEEEEECCC
IDNIYDVIQTINNLGLDV
HHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDINVDINVDITIIGGGFFGLYLAEYFSRLNKKVLVIEKENDAMQRASYNNQARVHNGYH
CCEEEEEEEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHCCCCCCEECCCCC
YPRSVLTALRSRISFPRFVDEFKPCIDNDFDKYYMISNRLGKITPNQFQKFCDRIGATHE
CHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCC
SAPPEIQRLIQPNMIDGIFKVKEFAFDSVLLKKTMLDRIQNSGVDILFNHNVKTIKQHQS
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCC
TSRLELKIDSDTETINISSKQVYNCTYSLLNSVLNGSNIELIPLRHEMTEMCVVDVPDEL
CCEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHEEECCCHHH
KKVGITVMCGPFFSVMPFPSKQAHSFSHVRYTPHYEWDDNNQSPYVDAHKLYSESFKRSA
HHCCEEEEECCCHHHCCCCCHHCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
WKKMKLDAQRYIPILADVKYKESLWEVKTILPRSETDDSRPILFKANYGLPGLHCVMGGK
HHHHHCCHHHCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCEEEEECCC
IDNIYDVIQTINNLGLDV
HHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA