Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

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The map label for this gene is 119944110

Identifier: 119944110

GI number: 119944110

Start: 425409

End: 426062

Strand: Reverse

Name: 119944110

Synonym: Ping_0325

Alternate gene names: NA

Gene position: 426062-425409 (Counterclockwise)

Preceding gene: 119944111

Following gene: 119944108

Centisome position: 9.34

GC content: 29.05

Gene sequence:

>654_bases
ATGAGAATAGAAATAGGTAGGAAGGTTGAGAAATACATAAAAAGCAGACTAAGTCGTTTAAAATTAAAACAAAATGATTT
TACAATTATCTCTAACAATTGTTGGGGAACTTTTATGTATAAAAAATTTGCCCTTCCTTACACAACTCCCTTTGTAAATT
TATTAATTTTTTCTCCTGATTATATTGAATTATTGGAAAACTTAACGCCTGAACTGTTAACCAAAATTTCCTTTATAGAG
CATGAGAACTCTCAACATAAAGAGGAGATGGTTAGACTCAATATCTATAAAAAAAACTACCCAATTGGTATTTTAGATAA
TAAATATGAACTGCATTTTTTACATTATCAATCACAACAAGATGCAAAAGATAAATGGCTGAAAAGATTGGCAAGAATGA
ATTTTGATAAATTAATCGTTAAATTCAGTGCATCATTGAAATTTGAAGACAATATGGCCGAACGGTTTGATGATTTGAAC
TTTAAAAACAAAATCTGCTTTACAGCAACAGCGTTTCCAAACTTAAAAAGTATCGTGTCCATGCAAGCATTTAAAGGTAA
AGAGACAGTGATTGATGAGTGGAAGCATACAACAAAAAAAGAATTTGACCTTATTAATTTTATTAACAATATACAAAGGG
AAGATAAAGCGTAA

Upstream 100 bases:

>100_bases
AGTTTTACTAACGAGCATTTTCAATATCTGGATAAACCAAGGGGGAAATGGACCCATAAAAAGCCTTCTGAGCTATTAAT
AAAAGAGATGGACCAAAAAA

Downstream 100 bases:

>100_bases
ACAGAGTTAACTTTATTTTTAGGAATAAAAAACCGCTTTAAATAAAGCGGTTTTTATTATCTGACCACAAGACTAAAAGC
TATTTCCACGCTTTCCAGGC

Product: exopolysaccharide biosynthesis protein-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MRIEIGRKVEKYIKSRLSRLKLKQNDFTIISNNCWGTFMYKKFALPYTTPFVNLLIFSPDYIELLENLTPELLTKISFIE
HENSQHKEEMVRLNIYKKNYPIGILDNKYELHFLHYQSQQDAKDKWLKRLARMNFDKLIVKFSASLKFEDNMAERFDDLN
FKNKICFTATAFPNLKSIVSMQAFKGKETVIDEWKHTTKKEFDLINFINNIQREDKA

Sequences:

>Translated_217_residues
MRIEIGRKVEKYIKSRLSRLKLKQNDFTIISNNCWGTFMYKKFALPYTTPFVNLLIFSPDYIELLENLTPELLTKISFIE
HENSQHKEEMVRLNIYKKNYPIGILDNKYELHFLHYQSQQDAKDKWLKRLARMNFDKLIVKFSASLKFEDNMAERFDDLN
FKNKICFTATAFPNLKSIVSMQAFKGKETVIDEWKHTTKKEFDLINFINNIQREDKA
>Mature_217_residues
MRIEIGRKVEKYIKSRLSRLKLKQNDFTIISNNCWGTFMYKKFALPYTTPFVNLLIFSPDYIELLENLTPELLTKISFIE
HENSQHKEEMVRLNIYKKNYPIGILDNKYELHFLHYQSQQDAKDKWLKRLARMNFDKLIVKFSASLKFEDNMAERFDDLN
FKNKICFTATAFPNLKSIVSMQAFKGKETVIDEWKHTTKKEFDLINFINNIQREDKA

Specific function: Unknown

COG id: COG3955

COG function: function code M; Exopolysaccharide biosynthesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015037 [H]

Pfam domain/function: PF08942 DUF1919 [H]

EC number: NA

Molecular weight: Translated: 25968; Mature: 25968

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIEIGRKVEKYIKSRLSRLKLKQNDFTIISNNCWGTFMYKKFALPYTTPFVNLLIFSPD
CCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEHHHHHHCCCCCCHHHEEEEECCH
YIELLENLTPELLTKISFIEHENSQHKEEMVRLNIYKKNYPIGILDNKYELHFLHYQSQQ
HHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHEEEEECCCCEEEECCCEEEEEEEECCCC
DAKDKWLKRLARMNFDKLIVKFSASLKFEDNMAERFDDLNFKNKICFTATAFPNLKSIVS
CHHHHHHHHHHHCCHHHHHHHHHCCCEECCCHHHHHHCCCCCCCEEEEEECCCCHHHHHH
MQAFKGKETVIDEWKHTTKKEFDLINFINNIQREDKA
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRIEIGRKVEKYIKSRLSRLKLKQNDFTIISNNCWGTFMYKKFALPYTTPFVNLLIFSPD
CCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEHHHHHHCCCCCCHHHEEEEECCH
YIELLENLTPELLTKISFIEHENSQHKEEMVRLNIYKKNYPIGILDNKYELHFLHYQSQQ
HHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHEEEEECCCCEEEECCCEEEEEEEECCCC
DAKDKWLKRLARMNFDKLIVKFSASLKFEDNMAERFDDLNFKNKICFTATAFPNLKSIVS
CHHHHHHHHHHHCCHHHHHHHHHCCCEECCCHHHHHHCCCCCCCEEEEEECCCCHHHHHH
MQAFKGKETVIDEWKHTTKKEFDLINFINNIQREDKA
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]