Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

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The map label for this gene is 119944053

Identifier: 119944053

GI number: 119944053

Start: 349324

End: 350451

Strand: Direct

Name: 119944053

Synonym: Ping_0268

Alternate gene names: NA

Gene position: 349324-350451 (Clockwise)

Preceding gene: 119944051

Following gene: 119944055

Centisome position: 7.66

GC content: 41.58

Gene sequence:

>1128_bases
ATGCGTATCACCGCTAATTTTGATTCAGGTAATATCGACGTTATTAATTTGAAGGATAAAAAAGATATCCAATTGTCTAT
TCGTCCGGACTTCGGGGGCGAATTTTTTCAGTGGTTTAACTTTCGACTGGAAGGTGAGGTTGGTCAGCAATATATCCTTA
ATATCCTTAATGCGGGTGAAGCCTCCTATCTTGAAGGATGGGAAAATTATCAAGCCGTGGCTTCTTATGATCGTAAGCAT
TGGTTCCGACTGCCAACATTTTATAAAGAGGGGAAATTAACTATCGTGGCGGATCTGGATTGTGAAACAATCCAAATTGC
CTACTTTGCGCCTTATAGTTATGAACGCCATCAAGACTTACTTGCGGCTGTGCAAACACATCCGCTGGTGAGTTTAGAGC
ACTTAGGTGAAACCCTTGATCAACGTGATTTAACTTTGGTTAAAATTGGCGATGGTGATACTAATAAACGCAATATTTGG
ATCACGGCTCGCCAGCATCCCGGTGAAACGATGGCTGAATGGTTAGTGGATGGATTAATGGATAGTTTACTTGATAGTAA
TAATCCTACGGGAAAATTATTATTGGATAAAGCTAACTTTTATATTGTGCCTAATATGAATCCCGATGGCAGTGCGCGCG
GACATCTTCGCACTAATGCGGCAGGCGTTAATTTGAACCGTGAATGGTTGAATCCAAGTTTAGAAAAAAGCCCTGAAGTT
TTTCATGTGATCAATAAAATGGAAGAGACGGGTGTTGATTTATTTTATGATGTGCATGGCGATGAGGCATTACCCTTTGT
TTTTCTGGCGGGTTCAGAAGGTACGCCGAGTTATAACAATCGACTTGCGGGTTTACGTAAGCGCTTTTCAGAAGTACTTA
TGTTAGCGAGTGCAGACTTTCAGTCTGAATTTGGTTATGACGTTGATGCGCCCGGTGAAGCGAATATGACTCTGGCAACA
AATTGGGTTGCGGAACGATTTGATTGTCTTGCTAATACATTAGAGATGCCATTTAAAGACAACGATAATTTACCCGATCC
TATGATGGGATGGTCACCGGAACGCTCGCTTAAGTTAGGTGAAGCATCATTAGTTGCTATGCTCGCTGTGGTTGATGATT
TACGTTAG

Upstream 100 bases:

>100_bases
TTTCTTTAATCAAGTTAGTTTTCCTATCCTGTTTGTTTACAATCCTTTATGCTCGACTTACTTTGTAAAAAATAAATAAC
TAATTAAAAAAGGAAATGCT

Downstream 100 bases:

>100_bases
TTTATAAAGCACTTAACCTTTAAAGAAAAACATTTAAATAAATGCCAATCAAAAAGCCTGACTTGTCAGGCTTTTTGATT
TTGGCGCTATTTAAACTGTT

Product: peptidase M14, carboxypeptidase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MRITANFDSGNIDVINLKDKKDIQLSIRPDFGGEFFQWFNFRLEGEVGQQYILNILNAGEASYLEGWENYQAVASYDRKH
WFRLPTFYKEGKLTIVADLDCETIQIAYFAPYSYERHQDLLAAVQTHPLVSLEHLGETLDQRDLTLVKIGDGDTNKRNIW
ITARQHPGETMAEWLVDGLMDSLLDSNNPTGKLLLDKANFYIVPNMNPDGSARGHLRTNAAGVNLNREWLNPSLEKSPEV
FHVINKMEETGVDLFYDVHGDEALPFVFLAGSEGTPSYNNRLAGLRKRFSEVLMLASADFQSEFGYDVDAPGEANMTLAT
NWVAERFDCLANTLEMPFKDNDNLPDPMMGWSPERSLKLGEASLVAMLAVVDDLR

Sequences:

>Translated_375_residues
MRITANFDSGNIDVINLKDKKDIQLSIRPDFGGEFFQWFNFRLEGEVGQQYILNILNAGEASYLEGWENYQAVASYDRKH
WFRLPTFYKEGKLTIVADLDCETIQIAYFAPYSYERHQDLLAAVQTHPLVSLEHLGETLDQRDLTLVKIGDGDTNKRNIW
ITARQHPGETMAEWLVDGLMDSLLDSNNPTGKLLLDKANFYIVPNMNPDGSARGHLRTNAAGVNLNREWLNPSLEKSPEV
FHVINKMEETGVDLFYDVHGDEALPFVFLAGSEGTPSYNNRLAGLRKRFSEVLMLASADFQSEFGYDVDAPGEANMTLAT
NWVAERFDCLANTLEMPFKDNDNLPDPMMGWSPERSLKLGEASLVAMLAVVDDLR
>Mature_375_residues
MRITANFDSGNIDVINLKDKKDIQLSIRPDFGGEFFQWFNFRLEGEVGQQYILNILNAGEASYLEGWENYQAVASYDRKH
WFRLPTFYKEGKLTIVADLDCETIQIAYFAPYSYERHQDLLAAVQTHPLVSLEHLGETLDQRDLTLVKIGDGDTNKRNIW
ITARQHPGETMAEWLVDGLMDSLLDSNNPTGKLLLDKANFYIVPNMNPDGSARGHLRTNAAGVNLNREWLNPSLEKSPEV
FHVINKMEETGVDLFYDVHGDEALPFVFLAGSEGTPSYNNRLAGLRKRFSEVLMLASADFQSEFGYDVDAPGEANMTLAT
NWVAERFDCLANTLEMPFKDNDNLPDPMMGWSPERSLKLGEASLVAMLAVVDDLR

Specific function: Unknown

COG id: COG2866

COG function: function code E; Predicted carboxypeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI190194403, Length=295, Percent_Identity=30.5084745762712, Blast_Score=122, Evalue=4e-28,
Organism=Homo sapiens, GI222352158, Length=312, Percent_Identity=27.8846153846154, Blast_Score=109, Evalue=3e-24,
Organism=Homo sapiens, GI31657119, Length=329, Percent_Identity=27.6595744680851, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI170763513, Length=322, Percent_Identity=26.3975155279503, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI120444924, Length=322, Percent_Identity=26.3975155279503, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI78482633, Length=291, Percent_Identity=27.1477663230241, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI118421091, Length=292, Percent_Identity=27.0547945205479, Blast_Score=81, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI115533904, Length=399, Percent_Identity=25.8145363408521, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI193202888, Length=374, Percent_Identity=22.4598930481283, Blast_Score=84, Evalue=9e-17,
Organism=Drosophila melanogaster, GI24641847, Length=313, Percent_Identity=26.8370607028754, Blast_Score=98, Evalue=8e-21,
Organism=Drosophila melanogaster, GI28571179, Length=313, Percent_Identity=26.8370607028754, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI161077807, Length=313, Percent_Identity=26.8370607028754, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24641845, Length=313, Percent_Identity=26.8370607028754, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24651466, Length=274, Percent_Identity=27.7372262773723, Blast_Score=82, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000834 [H]

Pfam domain/function: PF00246 Peptidase_M14 [H]

EC number: NA

Molecular weight: Translated: 42385; Mature: 42385

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRITANFDSGNIDVINLKDKKDIQLSIRPDFGGEFFQWFNFRLEGEVGQQYILNILNAGE
CEEEEECCCCCEEEEEECCCCCEEEEECCCCCHHHHHHCCEEEECCCCHHHHHHHHCCCC
ASYLEGWENYQAVASYDRKHWFRLPTFYKEGKLTIVADLDCETIQIAYFAPYSYERHQDL
HHHHHCHHHHHHHHHHCHHHEEECCCEECCCCEEEEEECCCCEEEEEEECCCCCHHHHHH
LAAVQTHPLVSLEHLGETLDQRDLTLVKIGDGDTNKRNIWITARQHPGETMAEWLVDGLM
HHHHHHCCCEEHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHH
DSLLDSNNPTGKLLLDKANFYIVPNMNPDGSARGHLRTNAAGVNLNREWLNPSLEKSPEV
HHHHCCCCCCCEEEEECCCEEEECCCCCCCCCCCEEEECCCCCCCCHHHCCCCCCCCCHH
FHVINKMEETGVDLFYDVHGDEALPFVFLAGSEGTPSYNNRLAGLRKRFSEVLMLASADF
HHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
QSEFGYDVDAPGEANMTLATNWVAERFDCLANTLEMPFKDNDNLPDPMMGWSPERSLKLG
HHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
EASLVAMLAVVDDLR
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MRITANFDSGNIDVINLKDKKDIQLSIRPDFGGEFFQWFNFRLEGEVGQQYILNILNAGE
CEEEEECCCCCEEEEEECCCCCEEEEECCCCCHHHHHHCCEEEECCCCHHHHHHHHCCCC
ASYLEGWENYQAVASYDRKHWFRLPTFYKEGKLTIVADLDCETIQIAYFAPYSYERHQDL
HHHHHCHHHHHHHHHHCHHHEEECCCEECCCCEEEEEECCCCEEEEEEECCCCCHHHHHH
LAAVQTHPLVSLEHLGETLDQRDLTLVKIGDGDTNKRNIWITARQHPGETMAEWLVDGLM
HHHHHHCCCEEHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHH
DSLLDSNNPTGKLLLDKANFYIVPNMNPDGSARGHLRTNAAGVNLNREWLNPSLEKSPEV
HHHHCCCCCCCEEEEECCCEEEECCCCCCCCCCCEEEECCCCCCCCHHHCCCCCCCCCHH
FHVINKMEETGVDLFYDVHGDEALPFVFLAGSEGTPSYNNRLAGLRKRFSEVLMLASADF
HHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
QSEFGYDVDAPGEANMTLATNWVAERFDCLANTLEMPFKDNDNLPDPMMGWSPERSLKLG
HHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
EASLVAMLAVVDDLR
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8320209 [H]