| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is bgxA [H]
Identifier: 119943929
GI number: 119943929
Start: 182140
End: 184401
Strand: Direct
Name: bgxA [H]
Synonym: Ping_0139
Alternate gene names: 119943929
Gene position: 182140-184401 (Clockwise)
Preceding gene: 119943928
Following gene: 119943931
Centisome position: 3.99
GC content: 51.81
Gene sequence:
>2262_bases ATGAAGAATAAAATGAACAAAGTCTTCTCTGTTACCCCGATCGCTCTGGCAGTCTTTCTCGCCGGTTGCAACAACGATGT AATAGAGACCACGCAGGTCGTTAAGGCTGAGTTTGCACAGACCAAACTCGATGCGCGCGGAGTTGATCTTATCAGCACCG ACGGTTACCAGTTTAAAGATCTTAATAAAAACGGAATATTGAATGTTTATGAAGATTGGCGTAAGACAGTAGATGAGCGG GTTGGCGATCTGGTTTCTCAGATGACGCTCGAAGAAAAAGTCGGCATGATGCTGATTGATACGATGAACGCTGCGGCTTA TGGTTCGGTGAACGGCACTCACGTTGATTATATCGAGCAGCAGAAGATGACCCGCTTTATCTTCCGCAACGCGATCCTGC CTCAGAACGAGGTTGACGCTCTTCCTATTGGGGAGCGTGCGCCAGGAGGGGATATTGTCACAGGTCGCGCCAGCGCATCG ATCAGCCCCTCGGAAGCCGCTCAATATATGAATATCGTGCAGGAGTTAAGCGAGTCTACCCGTCTGGGTATCCCGGCGCT GTTTAAATCCAATGCGCGTAACCATAACGATCCTAATGCCAGAGCCGGCATTAACGTTTCTGCCGGTGCCTTCTCCGAAT GGCCGAAAGAGGCGGGTCTGGCTGCTACCCGAGATATGGAGCTGATCGGCGAGTTCGCCCAGATTATGCGCACCGAGTGG AATGCAATCGGTCTGCGCGGCATGTACGGTTATATGGCAGATCTCTCCACCGAGCCGCGCTGGTACCGGGTACATGAAAC CTTTACTGAAGATTCTGATCTGGCTTCTGAAATTATGACGGTGCTGGTCAGTAACCTGCAGGGTAAGGAGGTGACCCCTA GCAGTGTCGTCCTGACCATGAAGCACTTTCCTGGCGGCGGTCCGCAGTTCCTAGGGTTAGATCCGCACTACATGGCGGGT CAGCATCAGAGCTATCCGACTGGCAATTTTGACTACCATGTTAAGCCCTTTAAAGCGGCGATCGATGCCGGTGTTGCGGC GCTGATGCCTTATTACGGTATTGTCGGTGGCGGCGAGTGGTCACTGAGTAATCCGGACGAGACTAACTTGGATGTGGGTG GCATACAACTTGCCGAGGTTGTCTCTGATCGTGTCCAAGATACAGTACGTGTCCCGTATAACGGATACAGCACGACCGAG GGGACGCCTGCCGGTAATGTCGGAATAGCCTTCTCCAAAGGAATTTTGTCGGATCTGCTGCGCAGGGATCTTGGCTTTAG CGGTGTGATTAACTCCGATACCGGTATTATCGGAGAGACCAACAACGGTCTGTCTGATACTGACACGATTCAAAACAACC GCGCCTGGGGTCTGCAGGACAAGGACAAGTCTGAACAGCTGGTTGTGGCTATCGAAGCGGGCACCGATGTGTTCTCCGGT TTCCACAGTAATTCTGAGGTTCGTACTCTGGTCGAGCAGGGCCTGGTTTCTGAAGCGCGTATTGACGAGTCGGTTAAACG TTTGCTGAAAGTGCAGTTTGAGTTGGGGCTGTTTGAAAATCCTTATGTGGATCCTGTACGTGCTAATGCCATTGTCGGTA ACGCATCATTTCAGGAAAAAGCTCTGCTGGCACAACGTAAAGCCGTTGTACTGCTTGACAATAAAGTCGCGGAAGGTGCA GTAGAAGCAATTCTGCCGCTTCCTGCAGCCGCTAATCTCTATACTATGGGAATGGACAGCGGGGTCGTTGAAGGTTACGG CTATACTGTGACTAATGGTGATCTAGAAGGTGAACGTCCGAGCGCAGCAGAAAGTGATTATGCGCTGATCCGTGTACGGG TAACCAATAAAGACACCGGCTTGTTAGTGTTCGGTGGCGCGGACTTTAAAGAAGTCGATGTGCTGGACTTTACCGGTATG GCGGCTGCGGGAACCTGGGATATCACCCCGTCTCTGACAGATATCCAGGCGGTGATGGCCGAAGTTGGTGCCGAAAATAC CGTGCTTTCGGTGTACTTCCGTCAGCCTTTTGTAATGGATGAAGCCAGCGGCCTGAAAGACGCCGGTGCTATTCTAGCGA CTTTCGGCTCTAAGGATAATGCGCTGATGGACGTTGTTACTGGTGGGTTCAATCCAAGTGGCAAACTGCCGTTTGCACTG GCTAACAGCAGTCAGGCGATTATCGACCAGGCGTCTGACGCACCGGGTTATGCTGAAGCAGATACGCTGTATCCATTCGG TTTCGGTCTGAGCTACGAGTAA
Upstream 100 bases:
>100_bases TTGACCGGGATCGGTATATTAACAATAATTGGTTAACCAAATGTTTATTCTTGTGTATAGTCCAGCGCACAATCAATGAT AGCAATACGGAGTTTTATCC
Downstream 100 bases:
>100_bases CGAGTAACGCTGAAAGGTAAGCTTGTTTAATAACGGCGCCAGAAATGGCGCCGTTTTTTTTGCCCAGCGGAAGCTGGCAA ACCCGCTCACTTACAAGATA
Product: glycoside hydrolase family 3 protein
Products: NA
Alternate protein names: Beta-glucosidase; Cellobiase; Gentiobiase; Beta-xylosidase; 1,4-beta-D-xylan xylohydrolase; Xylan 1,4-beta-xylosidase [H]
Number of amino acids: Translated: 753; Mature: 753
Protein sequence:
>753_residues MKNKMNKVFSVTPIALAVFLAGCNNDVIETTQVVKAEFAQTKLDARGVDLISTDGYQFKDLNKNGILNVYEDWRKTVDER VGDLVSQMTLEEKVGMMLIDTMNAAAYGSVNGTHVDYIEQQKMTRFIFRNAILPQNEVDALPIGERAPGGDIVTGRASAS ISPSEAAQYMNIVQELSESTRLGIPALFKSNARNHNDPNARAGINVSAGAFSEWPKEAGLAATRDMELIGEFAQIMRTEW NAIGLRGMYGYMADLSTEPRWYRVHETFTEDSDLASEIMTVLVSNLQGKEVTPSSVVLTMKHFPGGGPQFLGLDPHYMAG QHQSYPTGNFDYHVKPFKAAIDAGVAALMPYYGIVGGGEWSLSNPDETNLDVGGIQLAEVVSDRVQDTVRVPYNGYSTTE GTPAGNVGIAFSKGILSDLLRRDLGFSGVINSDTGIIGETNNGLSDTDTIQNNRAWGLQDKDKSEQLVVAIEAGTDVFSG FHSNSEVRTLVEQGLVSEARIDESVKRLLKVQFELGLFENPYVDPVRANAIVGNASFQEKALLAQRKAVVLLDNKVAEGA VEAILPLPAAANLYTMGMDSGVVEGYGYTVTNGDLEGERPSAAESDYALIRVRVTNKDTGLLVFGGADFKEVDVLDFTGM AAAGTWDITPSLTDIQAVMAEVGAENTVLSVYFRQPFVMDEASGLKDAGAILATFGSKDNALMDVVTGGFNPSGKLPFAL ANSSQAIIDQASDAPGYAEADTLYPFGFGLSYE
Sequences:
>Translated_753_residues MKNKMNKVFSVTPIALAVFLAGCNNDVIETTQVVKAEFAQTKLDARGVDLISTDGYQFKDLNKNGILNVYEDWRKTVDER VGDLVSQMTLEEKVGMMLIDTMNAAAYGSVNGTHVDYIEQQKMTRFIFRNAILPQNEVDALPIGERAPGGDIVTGRASAS ISPSEAAQYMNIVQELSESTRLGIPALFKSNARNHNDPNARAGINVSAGAFSEWPKEAGLAATRDMELIGEFAQIMRTEW NAIGLRGMYGYMADLSTEPRWYRVHETFTEDSDLASEIMTVLVSNLQGKEVTPSSVVLTMKHFPGGGPQFLGLDPHYMAG QHQSYPTGNFDYHVKPFKAAIDAGVAALMPYYGIVGGGEWSLSNPDETNLDVGGIQLAEVVSDRVQDTVRVPYNGYSTTE GTPAGNVGIAFSKGILSDLLRRDLGFSGVINSDTGIIGETNNGLSDTDTIQNNRAWGLQDKDKSEQLVVAIEAGTDVFSG FHSNSEVRTLVEQGLVSEARIDESVKRLLKVQFELGLFENPYVDPVRANAIVGNASFQEKALLAQRKAVVLLDNKVAEGA VEAILPLPAAANLYTMGMDSGVVEGYGYTVTNGDLEGERPSAAESDYALIRVRVTNKDTGLLVFGGADFKEVDVLDFTGM AAAGTWDITPSLTDIQAVMAEVGAENTVLSVYFRQPFVMDEASGLKDAGAILATFGSKDNALMDVVTGGFNPSGKLPFAL ANSSQAIIDQASDAPGYAEADTLYPFGFGLSYE >Mature_753_residues MKNKMNKVFSVTPIALAVFLAGCNNDVIETTQVVKAEFAQTKLDARGVDLISTDGYQFKDLNKNGILNVYEDWRKTVDER VGDLVSQMTLEEKVGMMLIDTMNAAAYGSVNGTHVDYIEQQKMTRFIFRNAILPQNEVDALPIGERAPGGDIVTGRASAS ISPSEAAQYMNIVQELSESTRLGIPALFKSNARNHNDPNARAGINVSAGAFSEWPKEAGLAATRDMELIGEFAQIMRTEW NAIGLRGMYGYMADLSTEPRWYRVHETFTEDSDLASEIMTVLVSNLQGKEVTPSSVVLTMKHFPGGGPQFLGLDPHYMAG QHQSYPTGNFDYHVKPFKAAIDAGVAALMPYYGIVGGGEWSLSNPDETNLDVGGIQLAEVVSDRVQDTVRVPYNGYSTTE GTPAGNVGIAFSKGILSDLLRRDLGFSGVINSDTGIIGETNNGLSDTDTIQNNRAWGLQDKDKSEQLVVAIEAGTDVFSG FHSNSEVRTLVEQGLVSEARIDESVKRLLKVQFELGLFENPYVDPVRANAIVGNASFQEKALLAQRKAVVLLDNKVAEGA VEAILPLPAAANLYTMGMDSGVVEGYGYTVTNGDLEGERPSAAESDYALIRVRVTNKDTGLLVFGGADFKEVDVLDFTGM AAAGTWDITPSLTDIQAVMAEVGAENTVLSVYFRQPFVMDEASGLKDAGAILATFGSKDNALMDVVTGGFNPSGKLPFAL ANSSQAIIDQASDAPGYAEADTLYPFGFGLSYE
Specific function: Exhibits both beta-glucosidase and beta-xylosidase activities [H]
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=653, Percent_Identity=25.5742725880551, Blast_Score=111, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21; =3.2.1.37 [H]
Molecular weight: Translated: 81138; Mature: 81138
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00041 HTH_ARAC_FAMILY_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKMNKVFSVTPIALAVFLAGCNNDVIETTQVVKAEFAQTKLDARGVDLISTDGYQFKD CCCCHHHHEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEE LNKNGILNVYEDWRKTVDERVGDLVSQMTLEEKVGMMLIDTMNAAAYGSVNGTHVDYIEQ CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEECCCCCCCHHHHHH QKMTRFIFRNAILPQNEVDALPIGERAPGGDIVTGRASASISPSEAAQYMNIVQELSEST HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHH RLGIPALFKSNARNHNDPNARAGINVSAGAFSEWPKEAGLAATRDMELIGEFAQIMRTEW CCCCCHHHHCCCCCCCCCCCCCCCEECCCCCHHCHHHCCCCCHHHHHHHHHHHHHHHHCC NAIGLRGMYGYMADLSTEPRWYRVHETFTEDSDLASEIMTVLVSNLQGKEVTPSSVVLTM CCEECHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEE KHFPGGGPQFLGLDPHYMAGQHQSYPTGNFDYHVKPFKAAIDAGVAALMPYYGIVGGGEW EECCCCCCCEECCCCHHCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHEECCCCC SLSNPDETNLDVGGIQLAEVVSDRVQDTVRVPYNGYSTTEGTPAGNVGIAFSKGILSDLL CCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCEEEHHHHHHHHH RRDLGFSGVINSDTGIIGETNNGLSDTDTIQNNRAWGLQDKDKSEQLVVAIEAGTDVFSG HHHCCCCCEECCCCCEEECCCCCCCCCHHCCCCCCCCCCCCCCCCEEEEEEECCCHHHHC FHSNSEVRTLVEQGLVSEARIDESVKRLLKVQFELGLFENPYVDPVRANAIVGNASFQEK CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHH ALLAQRKAVVLLDNKVAEGAVEAILPLPAAANLYTMGMDSGVVEGYGYTVTNGDLEGERP HHHHHCCEEEEECCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEECCCCCCCCC SAAESDYALIRVRVTNKDTGLLVFGGADFKEVDVLDFTGMAAAGTWDITPSLTDIQAVMA CCCCCCEEEEEEEEECCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHH EVGAENTVLSVYFRQPFVMDEASGLKDAGAILATFGSKDNALMDVVTGGFNPSGKLPFAL HHCCCCCEEEEEECCCEEECCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCEEE ANSSQAIIDQASDAPGYAEADTLYPFGFGLSYE CCCCHHHHCCCCCCCCCCCCCCCCEECCCCCCC >Mature Secondary Structure MKNKMNKVFSVTPIALAVFLAGCNNDVIETTQVVKAEFAQTKLDARGVDLISTDGYQFKD CCCCHHHHEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEE LNKNGILNVYEDWRKTVDERVGDLVSQMTLEEKVGMMLIDTMNAAAYGSVNGTHVDYIEQ CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEECCCCCCCHHHHHH QKMTRFIFRNAILPQNEVDALPIGERAPGGDIVTGRASASISPSEAAQYMNIVQELSEST HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHH RLGIPALFKSNARNHNDPNARAGINVSAGAFSEWPKEAGLAATRDMELIGEFAQIMRTEW CCCCCHHHHCCCCCCCCCCCCCCCEECCCCCHHCHHHCCCCCHHHHHHHHHHHHHHHHCC NAIGLRGMYGYMADLSTEPRWYRVHETFTEDSDLASEIMTVLVSNLQGKEVTPSSVVLTM CCEECHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEE KHFPGGGPQFLGLDPHYMAGQHQSYPTGNFDYHVKPFKAAIDAGVAALMPYYGIVGGGEW EECCCCCCCEECCCCHHCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHEECCCCC SLSNPDETNLDVGGIQLAEVVSDRVQDTVRVPYNGYSTTEGTPAGNVGIAFSKGILSDLL CCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCEEEHHHHHHHHH RRDLGFSGVINSDTGIIGETNNGLSDTDTIQNNRAWGLQDKDKSEQLVVAIEAGTDVFSG HHHCCCCCEECCCCCEEECCCCCCCCCHHCCCCCCCCCCCCCCCCEEEEEEECCCHHHHC FHSNSEVRTLVEQGLVSEARIDESVKRLLKVQFELGLFENPYVDPVRANAIVGNASFQEK CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHH ALLAQRKAVVLLDNKVAEGAVEAILPLPAAANLYTMGMDSGVVEGYGYTVTNGDLEGERP HHHHHCCEEEEECCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEECCCCCCCCC SAAESDYALIRVRVTNKDTGLLVFGGADFKEVDVLDFTGMAAAGTWDITPSLTDIQAVMA CCCCCCEEEEEEEEECCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHH EVGAENTVLSVYFRQPFVMDEASGLKDAGAILATFGSKDNALMDVVTGGFNPSGKLPFAL HHCCCCCEEEEEECCCEEECCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCEEE ANSSQAIIDQASDAPGYAEADTLYPFGFGLSYE CCCCHHHHCCCCCCCCCCCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7891660 [H]