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The map label for this gene is epsN [H]

Identifier: 119943900

GI number: 119943900

Start: 139160

End: 139912

Strand: Direct

Name: epsN [H]

Synonym: Ping_0107

Alternate gene names: 119943900

Gene position: 139160-139912 (Clockwise)

Preceding gene: 119943899

Following gene: 119943901

Centisome position: 3.05

GC content: 41.83

Gene sequence:

>753_bases
ATGAAAATTAAGTTTATTATATTCTTTGTATCTTTTTATCTGGTCGCGTTGCTTGCCACCTTACCGGCAACTGCATTATT
GCGTTTTATCCCTCAAAACACGGGGCTCCAGATTGCCGGTGTTTCCGGCTCTGCATGGCAGGGCGAAGCCGCGTTATTAT
CCTATAACAAAAAACTTAACCTGCAGCGCGTCTCATGGGATGTAGATTGGTTCGCATTGGCTGCTTTGCAGATTAAACTG
AATGTTAAATTTAACAATGGTCAGAATGCCATGTCAGGAAAAGGTTTTGTTAAATTAGGTCTTTCCGGGCTGGCGATTGA
AAATGTGTTGCTTGATTTAAGTGCTCAGGAATTGCTCTCCTATGCAGATTTACCCATTCCTGTTGAAGCATCGGGCGATA
TTACCCTGGTAATAAAAGAGGCATCACAGGGTGAACCCTATTGCGATACATTGGATGGTTTTTTTGTTTGGAAAAATGCT
GGGATCAACAGTGATCTTGGTAAAATAGATTTAACCACTATGAACATTAATTTGAGTTGTGATAAGGGTAATGCAGTGGC
TATTTTGCAGCAGGAATCAGAACAGCTAAGCAGCAACATTAATATCTTATTGCAGCAAGGTGGTGCTTACCGGCTAGTCG
GAACAGTTAAAGGCAGTAATAAACTTAGTCCTGACATAAATCAGGCACTCTCCTTTTTGGGGCCAAAAGATGCTTCTGGT
GCTACTGTAGTGCGCTTTAATGGCCGTTTGTAG

Upstream 100 bases:

>100_bases
GATATATCTCGTGCAGATGAAGAAGGTTATATTAAAGTCACTCGCCTTTCCCTTGGGTATTAAATCATGCCTTTAACTCT
GCCAAAGAGATCCCATCTTC

Downstream 100 bases:

>100_bases
AGATGCTTAAAGCAGGAAAAAATTATTTGTGATGGATTGACTCAAAAATATTGTTTGGAACTAGATTAACTCCATGTATG
AATATACACTGTTCATGTTT

Product: type II secretion system protein N

Products: NA

Alternate protein names: Cholera toxin secretion protein epsN [H]

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MKIKFIIFFVSFYLVALLATLPATALLRFIPQNTGLQIAGVSGSAWQGEAALLSYNKKLNLQRVSWDVDWFALAALQIKL
NVKFNNGQNAMSGKGFVKLGLSGLAIENVLLDLSAQELLSYADLPIPVEASGDITLVIKEASQGEPYCDTLDGFFVWKNA
GINSDLGKIDLTTMNINLSCDKGNAVAILQQESEQLSSNINILLQQGGAYRLVGTVKGSNKLSPDINQALSFLGPKDASG
ATVVRFNGRL

Sequences:

>Translated_250_residues
MKIKFIIFFVSFYLVALLATLPATALLRFIPQNTGLQIAGVSGSAWQGEAALLSYNKKLNLQRVSWDVDWFALAALQIKL
NVKFNNGQNAMSGKGFVKLGLSGLAIENVLLDLSAQELLSYADLPIPVEASGDITLVIKEASQGEPYCDTLDGFFVWKNA
GINSDLGKIDLTTMNINLSCDKGNAVAILQQESEQLSSNINILLQQGGAYRLVGTVKGSNKLSPDINQALSFLGPKDASG
ATVVRFNGRL
>Mature_250_residues
MKIKFIIFFVSFYLVALLATLPATALLRFIPQNTGLQIAGVSGSAWQGEAALLSYNKKLNLQRVSWDVDWFALAALQIKL
NVKFNNGQNAMSGKGFVKLGLSGLAIENVLLDLSAQELLSYADLPIPVEASGDITLVIKEASQGEPYCDTLDGFFVWKNA
GINSDLGKIDLTTMNINLSCDKGNAVAILQQESEQLSSNINILLQQGGAYRLVGTVKGSNKLSPDINQALSFLGPKDASG
ATVVRFNGRL

Specific function: Required for secretion of cholera toxin through the outer membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP N family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022792
- InterPro:   IPR000645 [H]

Pfam domain/function: PF01203 GSPII_N [H]

EC number: NA

Molecular weight: Translated: 26899; Mature: 26899

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKFIIFFVSFYLVALLATLPATALLRFIPQNTGLQIAGVSGSAWQGEAALLSYNKKLN
CEEEEEEHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEECCCCC
LQRVSWDVDWFALAALQIKLNVKFNNGQNAMSGKGFVKLGLSGLAIENVLLDLSAQELLS
EEEEEECCCEEEEEEEEEEEEEEECCCCCCCCCCCEEEECCCCCEEEHHHCCCCHHHHHH
YADLPIPVEASGDITLVIKEASQGEPYCDTLDGFFVWKNAGINSDLGKIDLTTMNINLSC
HCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEEEEE
DKGNAVAILQQESEQLSSNINILLQQGGAYRLVGTVKGSNKLSPDINQALSFLGPKDASG
CCCCEEEEEECCHHHHHCCEEEEEECCCEEEEEEEECCCCCCCCCHHHHHHHCCCCCCCC
ATVVRFNGRL
EEEEEECCCC
>Mature Secondary Structure
MKIKFIIFFVSFYLVALLATLPATALLRFIPQNTGLQIAGVSGSAWQGEAALLSYNKKLN
CEEEEEEHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEECCCCC
LQRVSWDVDWFALAALQIKLNVKFNNGQNAMSGKGFVKLGLSGLAIENVLLDLSAQELLS
EEEEEECCCEEEEEEEEEEEEEEECCCCCCCCCCCEEEECCCCCEEEHHHCCCCHHHHHH
YADLPIPVEASGDITLVIKEASQGEPYCDTLDGFFVWKNAGINSDLGKIDLTTMNINLSC
HCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEEEEE
DKGNAVAILQQESEQLSSNINILLQQGGAYRLVGTVKGSNKLSPDINQALSFLGPKDASG
CCCCEEEEEECCHHHHHCCEEEEEECCCEEEEEEEECCCCCCCCCHHHHHHHCCCCCCCC
ATVVRFNGRL
EEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]