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The map label for this gene is sciB

Identifier: 119900191

GI number: 119900191

Start: 4279622

End: 4280665

Strand: Direct

Name: sciB

Synonym: azo3902

Alternate gene names: NA

Gene position: 4279622-4280665 (Clockwise)

Preceding gene: 119900190

Following gene: 119900192

Centisome position: 97.8

GC content: 72.41

Gene sequence:

>1044_bases
ATGCGGCAAGCGCACGATCCTGTAAGCCTGTTCGACGCCCTGGCGCGCGAGCCCTGGGCCTTCGACTTCCTGCAGGCGAT
GCGCCGCATCGAATGCGCCTTTCCCGAGCGGCCGCGCTGGGGCAGCGCGCTGCGCCCGCAGGATGAGCCGGTGCGCCTCG
GGCAGGCGCCCTCGCTGTCGTTCGCGCCGGCCACGCTGTCCGCGTTCAAGACCGTCGAGGGAGCGCCGCCACGGCTGGAG
GTGCGCTTCTTCGGCCTGCTCGGCCCCAACGGCCCGCTGCCGCTGCATCTCACCGAATACGCCCACCACCGCGAGCTGCA
CCACGGCGACGAGACCTTCGCGCGCTTTCTCGACCTCATCCACCACCGCTTCCTTGCGCTGTTCTACCGCGCCTGGGCGC
AGGCCCAGCCCACGGTCAGCCTCGACCGCCCGCGCCAGGACCGCTTCTCCACCTACATCGGCTCGCTGATCGGCATCGGC
CAGCCCGCCCTGCAGCAGCGCGACAGCGTGCCGGACAACGCCCGCCGCTTCCAGGCCGGCCTGCTCGCGCGCCAGGTGCG
CAACGGCGAGGGGCTGCAGGCGGTGCTCACGGGCTATTTCGAGCTGCCGGTGGCGGTGGAACAGTACGTCGGCCACTGGA
TGACGCTGCGCGAACGCGACCATTCGCGCCTGGGTCGCGCCCGGCTGGGCAGCGACACCGTGCTCGGACGCCGGGTGTGG
GACCGCCAGAGCAAGTTCCGCCTGCAGATCGGCCCACTGACGCTGGTCCAGTACGAAGCCTTCCTGCCCGGTGGCAGCGC
GCTGCCGCGGCTGGCGGACTGGGTACGCTTCTACACCGGCGGCGAGCTGTCGTGGGATGCGCGGCTGCAGCTGCAGCGCG
ACCAGGTGCCGCCGCTGCGGCTTGCGCGCGGCGCGCGGCTCGGCTGGACGAGCTGGCTCGGCACCCGGCGCGGCAACCGC
GACGCCGACGAACTGGTGCTCGACGCCGAGCGCCTGGTTGCACGAACACCCCCTCCCCGTGCGGGCGATTCCCCGCACGA
CTGA

Upstream 100 bases:

>100_bases
TCATGGAGCATTTCCTCGCCCGCCACGCCTCGCTCAACAGCTTCACCCAGACCACGCTGCGCTCGCTCACGCGCGGGGTG
GTCATGCGCTGGGAGCCGCG

Downstream 100 bases:

>100_bases
CACCATCCGCGGCCGCCGCCGGCGCCGCATACGAAGAGAGAGACACGCATGAGCGAAATCAGTCGGGTAGCCTCGTTCGG
CAAACTCAACAGCCTCGCCT

Product: putative cytoplasmic protein SciB

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Quinoprotein Dehydrogenase; Cytoplasmic Protein; Replication/Virulence Associated Protein; Type VI Secretion System Protein ImpH; Type VI Secretion System Protein; Type VI Secretion Protein VasG; T6ss R; Type VI Secretion System Core Protein; Type VI Secretion System Protein EvpG; Conserved Protein; Protein ImpH; Secreted Protein; Cytoplasmic Protein SciB

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MRQAHDPVSLFDALAREPWAFDFLQAMRRIECAFPERPRWGSALRPQDEPVRLGQAPSLSFAPATLSAFKTVEGAPPRLE
VRFFGLLGPNGPLPLHLTEYAHHRELHHGDETFARFLDLIHHRFLALFYRAWAQAQPTVSLDRPRQDRFSTYIGSLIGIG
QPALQQRDSVPDNARRFQAGLLARQVRNGEGLQAVLTGYFELPVAVEQYVGHWMTLRERDHSRLGRARLGSDTVLGRRVW
DRQSKFRLQIGPLTLVQYEAFLPGGSALPRLADWVRFYTGGELSWDARLQLQRDQVPPLRLARGARLGWTSWLGTRRGNR
DADELVLDAERLVARTPPPRAGDSPHD

Sequences:

>Translated_347_residues
MRQAHDPVSLFDALAREPWAFDFLQAMRRIECAFPERPRWGSALRPQDEPVRLGQAPSLSFAPATLSAFKTVEGAPPRLE
VRFFGLLGPNGPLPLHLTEYAHHRELHHGDETFARFLDLIHHRFLALFYRAWAQAQPTVSLDRPRQDRFSTYIGSLIGIG
QPALQQRDSVPDNARRFQAGLLARQVRNGEGLQAVLTGYFELPVAVEQYVGHWMTLRERDHSRLGRARLGSDTVLGRRVW
DRQSKFRLQIGPLTLVQYEAFLPGGSALPRLADWVRFYTGGELSWDARLQLQRDQVPPLRLARGARLGWTSWLGTRRGNR
DADELVLDAERLVARTPPPRAGDSPHD
>Mature_347_residues
MRQAHDPVSLFDALAREPWAFDFLQAMRRIECAFPERPRWGSALRPQDEPVRLGQAPSLSFAPATLSAFKTVEGAPPRLE
VRFFGLLGPNGPLPLHLTEYAHHRELHHGDETFARFLDLIHHRFLALFYRAWAQAQPTVSLDRPRQDRFSTYIGSLIGIG
QPALQQRDSVPDNARRFQAGLLARQVRNGEGLQAVLTGYFELPVAVEQYVGHWMTLRERDHSRLGRARLGSDTVLGRRVW
DRQSKFRLQIGPLTLVQYEAFLPGGSALPRLADWVRFYTGGELSWDARLQLQRDQVPPLRLARGARLGWTSWLGTRRGNR
DADELVLDAERLVARTPPPRAGDSPHD

Specific function: Unknown

COG id: COG3520

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39435; Mature: 39435

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQAHDPVSLFDALAREPWAFDFLQAMRRIECAFPERPRWGSALRPQDEPVRLGQAPSLS
CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
FAPATLSAFKTVEGAPPRLEVRFFGLLGPNGPLPLHLTEYAHHRELHHGDETFARFLDLI
CCHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCEEHHHHHHHHHHHCCHHHHHHHHHHH
HHRFLALFYRAWAQAQPTVSLDRPRQDRFSTYIGSLIGIGQPALQQRDSVPDNARRFQAG
HHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHH
LLARQVRNGEGLQAVLTGYFELPVAVEQYVGHWMTLRERDHSRLGRARLGSDTVLGRRVW
HHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
DRQSKFRLQIGPLTLVQYEAFLPGGSALPRLADWVRFYTGGELSWDARLQLQRDQVPPLR
CCCCCEEEEECCEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHH
LARGARLGWTSWLGTRRGNRDADELVLDAERLVARTPPPRAGDSPHD
HHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MRQAHDPVSLFDALAREPWAFDFLQAMRRIECAFPERPRWGSALRPQDEPVRLGQAPSLS
CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
FAPATLSAFKTVEGAPPRLEVRFFGLLGPNGPLPLHLTEYAHHRELHHGDETFARFLDLI
CCHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCEEHHHHHHHHHHHCCHHHHHHHHHHH
HHRFLALFYRAWAQAQPTVSLDRPRQDRFSTYIGSLIGIGQPALQQRDSVPDNARRFQAG
HHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHH
LLARQVRNGEGLQAVLTGYFELPVAVEQYVGHWMTLRERDHSRLGRARLGSDTVLGRRVW
HHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
DRQSKFRLQIGPLTLVQYEAFLPGGSALPRLADWVRFYTGGELSWDARLQLQRDQVPPLR
CCCCCEEEEECCEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHH
LARGARLGWTSWLGTRRGNRDADELVLDAERLVARTPPPRAGDSPHD
HHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA