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The map label for this gene is clpB2 [H]

Identifier: 119900192

GI number: 119900192

Start: 4280714

End: 4283434

Strand: Direct

Name: clpB2 [H]

Synonym: azo3903

Alternate gene names: 119900192

Gene position: 4280714-4283434 (Clockwise)

Preceding gene: 119900191

Following gene: 119900193

Centisome position: 97.82

GC content: 68.17

Gene sequence:

>2721_bases
ATGAGCGAAATCAGTCGGGTAGCCTCGTTCGGCAAACTCAACAGCCTCGCCTACAAGGCGATGGAAGGCGCCACCGTCTT
CTGCAAGCTGCGCGGCAATCCCTATGTGGAGCTGGAACACTGGCTGCAGCAGCTGCTGCAGAACGAGGACACCGACCTGC
ACCGCATCGTGCGCCACTTCGACGTGGACGCGGCGCGCCTGGCCGCCGACATGACCACCGCGCTCGACCGCCTGCCGCGC
GGCTCGACCTCGATCTCGGGCCTCTCCGAAAACCTCGACACGCTCGTCGAACGCGGCTGGGTGTATGCCTCTCTGATGTT
CGGCGACCGCCAGATCCGCTCCGGCTACCTGCTGGTCGGCATGCTCAAGACGCCCTCGCTGCGCAACGCGCTGATGGCGA
TCTCGCGCCAGTTCGAGCGCGTGCGCCCCGATGTGCTGACCGACGAATTCACCAAGATCGTCGCCGGCTCGGCGGAAGAA
AACCTCACCGCGCGCGATGGCTCGGGCGGCGCGCCGGGCGAGGACAGCGGCGCGATTGCGCCCGCGCAGATGGGCAAGCA
GGAGGCGCTGAAGAAATTCACCGTCGACCTCACCGAGCAGGCCCGCTCCGGCAAGATGGACCCGATCGTCGGCCGCGACG
AAGAAATCCGCCAGGTGGTCGACATCCTGATGCGCCGCCGCCAGAACAACCCCATCCTGGTCGGCGAGGCCGGCGTCGGC
AAGACCGCGGTGGTCGAAGGCTTCGCCCAGCGCATCGCGCGCGGCGACGTGCCGCCGGCGCTCAAGGACGTCTCGCTGCT
GGCGCTGGATGTCGGCCTGCTGCAGGCCGGCGCCAGCATGAAGGGCGAATTCGAGCAGCGACTGCGCTCGGTCATCGACG
AAGTCCAGGCCAGCCCCAAGCCCATCATCCTGTTCGTCGATGAGACCCACACCCTGGTCGGCGCCGGCGGCGCGGCCGGC
ACCGGCGATGCGGCCAACCTGCTCAAGCCGGCGCTCGCGCGCGGCACGCTGCGCACCGTCGGCGCCACCACCTGGGCCGA
GTACAAGAAGTACATCGAGAAGGACCCGGCGCTGACCCGGCGCTTCCAGAACGTGCAGGTCGACGAGCCGGACGAGAAGA
AGGCGGTGCTCATGATGCGCGGCGTTGCCAGCACCATGGAGAAGCACCACCAGGTGCAGATCCTCGACGAGGCGCTGGAG
GCCGCGGTCAAGCTGTCGCACCGCTACATCCCGGCGCGCCAGCTGCCGGACAAGTCCGTCTCGCTGCTCGACACCGCCTG
CGCCCGCGTCGCGGTGAGCCTGCACGCCACCCCGGCCGAGGTGGACGACAGCCGCAAGCGCATCGACGCGCTGAACACCG
AGCTGGAAATCATCGGCCGCGAGAGCAACATCGGCATCGAGGTCGGCGAGCGCCGTGCCCATGCCGAGGCCCTGCTGGCC
GAAGAACAGCAGCGGCTGGCCGAACTCGAGGCGCGCTGGGCGGCCGAGAAGACGCTGGTCGATGAACTCCTCGCGCTGCG
CGCCAAGCTGCGCAGCGGCAGCCGCCCGGTGGAAGGCACCGGCAGCGCGCTGGAAGCCGCGGCCGAAGCGGCTGCGCCGG
AGGCCGCCGCCGAGAGCGCGCCCGAACCCGAGCGCGAGGCGCTGTTCGCGCGCCTGCGCGAAGTGCAGGCCGAACTCGCC
ACGCTGCAGGGCGAAGACCCGCTGATCCTGCCGACAGTGGACTACCAGGCGGTGGCCTCGGTGGTCGCCGACTGGACCGG
CATCCCGGTCGGCCGCATGGCGCGCAACGAAATCGAGAACGTGCTGCGCCTGCCGCAGCTGCTCGGCCAGCGCGTCATCG
GCCAGGACCACGCGATGGAGATGATCGCCAAGCGCATCCAGACTTCGCGCGCCGGGCTCGACAACCCCAACAAGCCGATC
GGCGTGTTCATGCTCGCCGGCACCTCGGGCGTCGGCAAGACCGAAACCGCGCTGGCACTGGCCGAAGCGCTGTACGGCGG
CGAGCAGAACGTCGTCACGATCAACATGAGCGAATTCCAGGAAGCGCACACCGTGTCCACGCTCAAGGGCGCGCCTCCGG
GCTACGTCGGCTACGGCGAAGGCGGCGTGCTGACCGAGGCGGTGCGGCGCAAGCCCTACAGCGTGGTGCTGCTCGACGAG
GTCGAGAAGGCCCACCCCGATGTGCACGAGATGTTCTTCCAGGTCTTCGACAAGGGCTTCATGGAAGACGGCGAAGGCCG
CTTCATCGACTTCAAGAACACCCTGATCCTGCTCACCACCAATGCCGGCACCGACCTCATCGCCAGCATGTGCAAGGACC
CCGACCTGCTGCCCGACCCGGAAGGCCTCGCCAAGGCGCTGCGCGACCCGCTGCTGAAGATCTTCCCGCCGGCGCTGCTC
GGCCGCCTCGTCACCATTCCCTACTACCCGCTGACCGACGCCATGCTGGGCGCCATCGTCCGGCTGCAGCTCGGGCGCAT
CAAGAAGCGCGTGGAAGCGCGCTACAAGATCCCGTTCGAGTATGGCGACGACGTGGTCGAGCTGGTGGTCAGCCGCTGCA
CCGAGAGCGAATCCGGCGGCCGCATGATCGACGCCATCCTGACCAACACCATGCTGCCCGACATCAGCCGCGAGTTCCTG
AACCGGACGATGGAAGGCAAGCCGATCGTGCGCGTGGCGATGGGAGTCGCGAATGCCGACTTCACCTACAACTTCGATTG
A

Upstream 100 bases:

>100_bases
CCTGGTTGCACGAACACCCCCTCCCCGTGCGGGCGATTCCCCGCACGACTGACACCATCCGCGGCCGCCGCCGGCGCCGC
ATACGAAGAGAGAGACACGC

Downstream 100 bases:

>100_bases
TCAACGCCGCTGGCCCGCCGCGGCCGGCCGGCACTGGCACCGGGCACTGTTGGCGCTCTTCGTCACGCTGTGCGTGAGCG
CCTGTTCTGAGGGATACGCA

Product: putative ATP-dependent Clp protease, ATP-binding subunit ClpB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 906; Mature: 905

Protein sequence:

>906_residues
MSEISRVASFGKLNSLAYKAMEGATVFCKLRGNPYVELEHWLQQLLQNEDTDLHRIVRHFDVDAARLAADMTTALDRLPR
GSTSISGLSENLDTLVERGWVYASLMFGDRQIRSGYLLVGMLKTPSLRNALMAISRQFERVRPDVLTDEFTKIVAGSAEE
NLTARDGSGGAPGEDSGAIAPAQMGKQEALKKFTVDLTEQARSGKMDPIVGRDEEIRQVVDILMRRRQNNPILVGEAGVG
KTAVVEGFAQRIARGDVPPALKDVSLLALDVGLLQAGASMKGEFEQRLRSVIDEVQASPKPIILFVDETHTLVGAGGAAG
TGDAANLLKPALARGTLRTVGATTWAEYKKYIEKDPALTRRFQNVQVDEPDEKKAVLMMRGVASTMEKHHQVQILDEALE
AAVKLSHRYIPARQLPDKSVSLLDTACARVAVSLHATPAEVDDSRKRIDALNTELEIIGRESNIGIEVGERRAHAEALLA
EEQQRLAELEARWAAEKTLVDELLALRAKLRSGSRPVEGTGSALEAAAEAAAPEAAAESAPEPEREALFARLREVQAELA
TLQGEDPLILPTVDYQAVASVVADWTGIPVGRMARNEIENVLRLPQLLGQRVIGQDHAMEMIAKRIQTSRAGLDNPNKPI
GVFMLAGTSGVGKTETALALAEALYGGEQNVVTINMSEFQEAHTVSTLKGAPPGYVGYGEGGVLTEAVRRKPYSVVLLDE
VEKAHPDVHEMFFQVFDKGFMEDGEGRFIDFKNTLILLTTNAGTDLIASMCKDPDLLPDPEGLAKALRDPLLKIFPPALL
GRLVTIPYYPLTDAMLGAIVRLQLGRIKKRVEARYKIPFEYGDDVVELVVSRCTESESGGRMIDAILTNTMLPDISREFL
NRTMEGKPIVRVAMGVANADFTYNFD

Sequences:

>Translated_906_residues
MSEISRVASFGKLNSLAYKAMEGATVFCKLRGNPYVELEHWLQQLLQNEDTDLHRIVRHFDVDAARLAADMTTALDRLPR
GSTSISGLSENLDTLVERGWVYASLMFGDRQIRSGYLLVGMLKTPSLRNALMAISRQFERVRPDVLTDEFTKIVAGSAEE
NLTARDGSGGAPGEDSGAIAPAQMGKQEALKKFTVDLTEQARSGKMDPIVGRDEEIRQVVDILMRRRQNNPILVGEAGVG
KTAVVEGFAQRIARGDVPPALKDVSLLALDVGLLQAGASMKGEFEQRLRSVIDEVQASPKPIILFVDETHTLVGAGGAAG
TGDAANLLKPALARGTLRTVGATTWAEYKKYIEKDPALTRRFQNVQVDEPDEKKAVLMMRGVASTMEKHHQVQILDEALE
AAVKLSHRYIPARQLPDKSVSLLDTACARVAVSLHATPAEVDDSRKRIDALNTELEIIGRESNIGIEVGERRAHAEALLA
EEQQRLAELEARWAAEKTLVDELLALRAKLRSGSRPVEGTGSALEAAAEAAAPEAAAESAPEPEREALFARLREVQAELA
TLQGEDPLILPTVDYQAVASVVADWTGIPVGRMARNEIENVLRLPQLLGQRVIGQDHAMEMIAKRIQTSRAGLDNPNKPI
GVFMLAGTSGVGKTETALALAEALYGGEQNVVTINMSEFQEAHTVSTLKGAPPGYVGYGEGGVLTEAVRRKPYSVVLLDE
VEKAHPDVHEMFFQVFDKGFMEDGEGRFIDFKNTLILLTTNAGTDLIASMCKDPDLLPDPEGLAKALRDPLLKIFPPALL
GRLVTIPYYPLTDAMLGAIVRLQLGRIKKRVEARYKIPFEYGDDVVELVVSRCTESESGGRMIDAILTNTMLPDISREFL
NRTMEGKPIVRVAMGVANADFTYNFD
>Mature_905_residues
SEISRVASFGKLNSLAYKAMEGATVFCKLRGNPYVELEHWLQQLLQNEDTDLHRIVRHFDVDAARLAADMTTALDRLPRG
STSISGLSENLDTLVERGWVYASLMFGDRQIRSGYLLVGMLKTPSLRNALMAISRQFERVRPDVLTDEFTKIVAGSAEEN
LTARDGSGGAPGEDSGAIAPAQMGKQEALKKFTVDLTEQARSGKMDPIVGRDEEIRQVVDILMRRRQNNPILVGEAGVGK
TAVVEGFAQRIARGDVPPALKDVSLLALDVGLLQAGASMKGEFEQRLRSVIDEVQASPKPIILFVDETHTLVGAGGAAGT
GDAANLLKPALARGTLRTVGATTWAEYKKYIEKDPALTRRFQNVQVDEPDEKKAVLMMRGVASTMEKHHQVQILDEALEA
AVKLSHRYIPARQLPDKSVSLLDTACARVAVSLHATPAEVDDSRKRIDALNTELEIIGRESNIGIEVGERRAHAEALLAE
EQQRLAELEARWAAEKTLVDELLALRAKLRSGSRPVEGTGSALEAAAEAAAPEAAAESAPEPEREALFARLREVQAELAT
LQGEDPLILPTVDYQAVASVVADWTGIPVGRMARNEIENVLRLPQLLGQRVIGQDHAMEMIAKRIQTSRAGLDNPNKPIG
VFMLAGTSGVGKTETALALAEALYGGEQNVVTINMSEFQEAHTVSTLKGAPPGYVGYGEGGVLTEAVRRKPYSVVLLDEV
EKAHPDVHEMFFQVFDKGFMEDGEGRFIDFKNTLILLTTNAGTDLIASMCKDPDLLPDPEGLAKALRDPLLKIFPPALLG
RLVTIPYYPLTDAMLGAIVRLQLGRIKKRVEARYKIPFEYGDDVVELVVSRCTESESGGRMIDAILTNTMLPDISREFLN
RTMEGKPIVRVAMGVANADFTYNFD

Specific function: Required for secretion of hcp1 probably by providing the energy source for its translocation [H]

COG id: COG0542

COG function: function code O; ATPases with chaperone activity, ATP-binding subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the clpA/clpB family [H]

Homologues:

Organism=Homo sapiens, GI13540606, Length=273, Percent_Identity=32.6007326007326, Blast_Score=148, Evalue=2e-35,
Organism=Escherichia coli, GI1788943, Length=867, Percent_Identity=39.2156862745098, Blast_Score=560, Evalue=1e-160,
Organism=Escherichia coli, GI1787109, Length=325, Percent_Identity=38.1538461538462, Blast_Score=238, Evalue=9e-64,
Organism=Saccharomyces cerevisiae, GI6320464, Length=720, Percent_Identity=38.4722222222222, Blast_Score=472, Evalue=1e-133,
Organism=Saccharomyces cerevisiae, GI6323002, Length=714, Percent_Identity=35.9943977591036, Blast_Score=444, Evalue=1e-125,

Paralogues:

None

Copy number: 560 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013093
- InterPro:   IPR003959
- InterPro:   IPR017729
- InterPro:   IPR018368
- InterPro:   IPR001270
- InterPro:   IPR019489
- InterPro:   IPR023150 [H]

Pfam domain/function: PF00004 AAA; PF07724 AAA_2; PF10431 ClpB_D2-small [H]

EC number: NA

Molecular weight: Translated: 98833; Mature: 98702

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS00870 CLPAB_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEISRVASFGKLNSLAYKAMEGATVFCKLRGNPYVELEHWLQQLLQNEDTDLHRIVRHF
CCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHH
DVDAARLAADMTTALDRLPRGSTSISGLSENLDTLVERGWVYASLMFGDRQIRSGYLLVG
CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCHHHCCCEEEEE
MLKTPSLRNALMAISRQFERVRPDVLTDEFTKIVAGSAEENLTARDGSGGAPGEDSGAIA
EECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PAQMGKQEALKKFTVDLTEQARSGKMDPIVGRDEEIRQVVDILMRRRQNNPILVGEAGVG
HHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCC
KTAVVEGFAQRIARGDVPPALKDVSLLALDVGLLQAGASMKGEFEQRLRSVIDEVQASPK
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
PIILFVDETHTLVGAGGAAGTGDAANLLKPALARGTLRTVGATTWAEYKKYIEKDPALTR
CEEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHH
RFQNVQVDEPDEKKAVLMMRGVASTMEKHHQVQILDEALEAAVKLSHRYIPARQLPDKSV
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHH
SLLDTACARVAVSLHATPAEVDDSRKRIDALNTELEIIGRESNIGIEVGERRAHAEALLA
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCEECCHHHHHHHHHH
EEQQRLAELEARWAAEKTLVDELLALRAKLRSGSRPVEGTGSALEAAAEAAAPEAAAESA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHCCC
PEPEREALFARLREVQAELATLQGEDPLILPTVDYQAVASVVADWTGIPVGRMARNEIEN
CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHH
VLRLPQLLGQRVIGQDHAMEMIAKRIQTSRAGLDNPNKPIGVFMLAGTSGVGKTETALAL
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHH
AEALYGGEQNVVTINMSEFQEAHTVSTLKGAPPGYVGYGEGGVLTEAVRRKPYSVVLLDE
HHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEHH
VEKAHPDVHEMFFQVFDKGFMEDGEGRFIDFKNTLILLTTNAGTDLIASMCKDPDLLPDP
HHHHCCCHHHHHHHHHHHHHCCCCCCCEEEECCEEEEEEECCCHHHHHHHHCCCCCCCCC
EGLAKALRDPLLKIFPPALLGRLVTIPYYPLTDAMLGAIVRLQLGRIKKRVEARYKIPFE
HHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCHH
YGDDVVELVVSRCTESESGGRMIDAILTNTMLPDISREFLNRTMEGKPIVRVAMGVANAD
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEHHHHCCCCC
FTYNFD
EEEECC
>Mature Secondary Structure 
SEISRVASFGKLNSLAYKAMEGATVFCKLRGNPYVELEHWLQQLLQNEDTDLHRIVRHF
CHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHH
DVDAARLAADMTTALDRLPRGSTSISGLSENLDTLVERGWVYASLMFGDRQIRSGYLLVG
CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCHHHCCCEEEEE
MLKTPSLRNALMAISRQFERVRPDVLTDEFTKIVAGSAEENLTARDGSGGAPGEDSGAIA
EECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PAQMGKQEALKKFTVDLTEQARSGKMDPIVGRDEEIRQVVDILMRRRQNNPILVGEAGVG
HHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCC
KTAVVEGFAQRIARGDVPPALKDVSLLALDVGLLQAGASMKGEFEQRLRSVIDEVQASPK
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
PIILFVDETHTLVGAGGAAGTGDAANLLKPALARGTLRTVGATTWAEYKKYIEKDPALTR
CEEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHH
RFQNVQVDEPDEKKAVLMMRGVASTMEKHHQVQILDEALEAAVKLSHRYIPARQLPDKSV
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHH
SLLDTACARVAVSLHATPAEVDDSRKRIDALNTELEIIGRESNIGIEVGERRAHAEALLA
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCEECCHHHHHHHHHH
EEQQRLAELEARWAAEKTLVDELLALRAKLRSGSRPVEGTGSALEAAAEAAAPEAAAESA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHCCC
PEPEREALFARLREVQAELATLQGEDPLILPTVDYQAVASVVADWTGIPVGRMARNEIEN
CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHH
VLRLPQLLGQRVIGQDHAMEMIAKRIQTSRAGLDNPNKPIGVFMLAGTSGVGKTETALAL
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHH
AEALYGGEQNVVTINMSEFQEAHTVSTLKGAPPGYVGYGEGGVLTEAVRRKPYSVVLLDE
HHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEHH
VEKAHPDVHEMFFQVFDKGFMEDGEGRFIDFKNTLILLTTNAGTDLIASMCKDPDLLPDP
HHHHCCCHHHHHHHHHHHHHCCCCCCCEEEECCEEEEEEECCCHHHHHHHHCCCCCCCCC
EGLAKALRDPLLKIFPPALLGRLVTIPYYPLTDAMLGAIVRLQLGRIKKRVEARYKIPFE
HHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCHH
YGDDVVELVVSRCTESESGGRMIDAILTNTMLPDISREFLNRTMEGKPIVRVAMGVANAD
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEHHHHCCCCC
FTYNFD
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Serine endopeptidases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]