| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is hisA
Identifier: 119899634
GI number: 119899634
Start: 3683067
End: 3683822
Strand: Reverse
Name: hisA
Synonym: azo3345
Alternate gene names: 119899634
Gene position: 3683822-3683067 (Counterclockwise)
Preceding gene: 119899635
Following gene: 119899633
Centisome position: 84.18
GC content: 63.62
Gene sequence:
>756_bases ATGTTGCTGATCCCCGCTATCGACCTGAAGGATGGTCAATGTGTTCGCCTGAAGCAGGGCGAAATGGACGACGCCACGGT GTTCTCCGAAGATCCTGCCGCGATGGCGCGGCACTGGATCAAGCAGGGGGCCCGCCGGCTGCATCTCGTCGATCTCAACG GCGCGTTCGCTGGCAAGCCCAAGAACGGCGGCGCCATTCGCGCGATCACCGACGAAGTGGGTGACGACATCCCCGTTCAG CTCGGCGGCGGCATTCGTGACCTCGATACCATCGAACACTATCTCGACAACGGCATCTCCTACGTCATCATCGGCACCGC TGCGGTGAAGAACCCGGGTTTCCTGCACGATGCGTGCGGGGCGTTTCCGGGCCACATCATCGTCGGTCTTGATGCGAAGG ACGGGAAGGTCGCGGTAGACGGCTGGTCCAAGATGACCGGCCACGATGTCGTCGATCTCGCCAAGAAGTTCGAGGACTAC GGGGTCGAAGCCGTGATCTACACCGACATCGGCCGTGACGGCATGCTGTCGGGCGTCAATATCGAAGCCACGGTCAGGCT TGCCCGGGCGCTCCGCATCCCGGTCATTGCCAGCGGTGGCATCGCTTCGCTCACCGACATCGAAGCCCTGTGCGCCGTCG AGGACGAAGGCATCATGGGGGCGATCACTGGACGTGCAATCTACGAAGGCACGCTCGACCTTTCGGCAGCCCAGTCCCGC GCAGACGCTCTCCGCGCGCCGGGCGGAGCCGCCTGA
Upstream 100 bases:
>100_bases GAGCGCCCAGGCGGGTCTGCGCTTGCTCGACAATTTCATCCGTTGGGCGCCCTGAGCGGCGGCCAGCATCTCCCTCATCT TCACTGCTTCTGTTCCCGGT
Downstream 100 bases:
>100_bases TGCTGGCAAAGCGCATCATTCCCTGTCTCGACGTCAGCGCAGGCCGGGTCGTCAAGGGCGTCAATTTCGTCGATCTCCGC GACGCCGGAGATCCGGTCGA
Product: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MLLIPAIDLKDGQCVRLKQGEMDDATVFSEDPAAMARHWIKQGARRLHLVDLNGAFAGKPKNGGAIRAITDEVGDDIPVQ LGGGIRDLDTIEHYLDNGISYVIIGTAAVKNPGFLHDACGAFPGHIIVGLDAKDGKVAVDGWSKMTGHDVVDLAKKFEDY GVEAVIYTDIGRDGMLSGVNIEATVRLARALRIPVIASGGIASLTDIEALCAVEDEGIMGAITGRAIYEGTLDLSAAQSR ADALRAPGGAA
Sequences:
>Translated_251_residues MLLIPAIDLKDGQCVRLKQGEMDDATVFSEDPAAMARHWIKQGARRLHLVDLNGAFAGKPKNGGAIRAITDEVGDDIPVQ LGGGIRDLDTIEHYLDNGISYVIIGTAAVKNPGFLHDACGAFPGHIIVGLDAKDGKVAVDGWSKMTGHDVVDLAKKFEDY GVEAVIYTDIGRDGMLSGVNIEATVRLARALRIPVIASGGIASLTDIEALCAVEDEGIMGAITGRAIYEGTLDLSAAQSR ADALRAPGGAA >Mature_251_residues MLLIPAIDLKDGQCVRLKQGEMDDATVFSEDPAAMARHWIKQGARRLHLVDLNGAFAGKPKNGGAIRAITDEVGDDIPVQ LGGGIRDLDTIEHYLDNGISYVIIGTAAVKNPGFLHDACGAFPGHIIVGLDAKDGKVAVDGWSKMTGHDVVDLAKKFEDY GVEAVIYTDIGRDGMLSGVNIEATVRLARALRIPVIASGGIASLTDIEALCAVEDEGIMGAITGRAIYEGTLDLSAAQSR ADALRAPGGAA
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family
Homologues:
Organism=Escherichia coli, GI87082028, Length=243, Percent_Identity=32.9218106995885, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI1788336, Length=243, Percent_Identity=22.2222222222222, Blast_Score=68, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS4_AZOSB (A1KAV5)
Other databases:
- EMBL: AM406670 - RefSeq: YP_934847.1 - ProteinModelPortal: A1KAV5 - SMR: A1KAV5 - STRING: A1KAV5 - GeneID: 4609005 - GenomeReviews: AM406670_GR - KEGG: azo:azo3345 - eggNOG: COG0106 - HOGENOM: HBG541613 - OMA: SIIYTDI - PhylomeDB: A1KAV5 - ProtClustDB: PRK00748 - BioCyc: ASP62928:AZO3345-MONOMER - GO: GO:0005737 - HAMAP: MF_01014 - InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR00007
Pfam domain/function: PF00977 His_biosynth; SSF51366 RibP_bind_barrel
EC number: =5.3.1.16
Molecular weight: Translated: 26301; Mature: 26301
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: ACT_SITE 8-8 ACT_SITE 131-131
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLIPAIDLKDGQCVRLKQGEMDDATVFSEDPAAMARHWIKQGARRLHLVDLNGAFAGKP CEEEEEEECCCCCEEEEECCCCCCCEEECCCHHHHHHHHHHHCCCEEEEEEECCCCCCCC KNGGAIRAITDEVGDDIPVQLGGGIRDLDTIEHYLDNGISYVIIGTAAVKNPGFLHDACG CCCCEEEEEHHHHCCCCCEEECCCCCHHHHHHHHHHCCCEEEEEEEEEECCCCCCHHHHC AFPGHIIVGLDAKDGKVAVDGWSKMTGHDVVDLAKKFEDYGVEAVIYTDIGRDGMLSGVN CCCCEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCC IEATVRLARALRIPVIASGGIASLTDIEALCAVEDEGIMGAITGRAIYEGTLDLSAAQSR HHHHHHHHHHHCCCEEECCCCCCHHHHHHHEEECCCCEEEEEECCEEEECCCCHHHHHHH ADALRAPGGAA HHHHCCCCCCC >Mature Secondary Structure MLLIPAIDLKDGQCVRLKQGEMDDATVFSEDPAAMARHWIKQGARRLHLVDLNGAFAGKP CEEEEEEECCCCCEEEEECCCCCCCEEECCCHHHHHHHHHHHCCCEEEEEEECCCCCCCC KNGGAIRAITDEVGDDIPVQLGGGIRDLDTIEHYLDNGISYVIIGTAAVKNPGFLHDACG CCCCEEEEEHHHHCCCCCEEECCCCCHHHHHHHHHHCCCEEEEEEEEEECCCCCCHHHHC AFPGHIIVGLDAKDGKVAVDGWSKMTGHDVVDLAKKFEDYGVEAVIYTDIGRDGMLSGVN CCCCEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCC IEATVRLARALRIPVIASGGIASLTDIEALCAVEDEGIMGAITGRAIYEGTLDLSAAQSR HHHHHHHHHHHCCCEEECCCCCCHHHHHHHEEECCCCEEEEEECCEEEECCCCHHHHHHH ADALRAPGGAA HHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA