Click here to switch to the map view.

The map label for this gene is rdxB [H]

Identifier: 119899390

GI number: 119899390

Start: 3408745

End: 3410151

Strand: Reverse

Name: rdxB [H]

Synonym: azo3100

Alternate gene names: 119899390

Gene position: 3410151-3408745 (Counterclockwise)

Preceding gene: 119899392

Following gene: 119899389

Centisome position: 77.93

GC content: 66.88

Gene sequence:

>1407_bases
ATGTCCGAGCCCACCAAAAGCCAGCGCGTCATCAACATCCAACCCCTGTTTGCTTCAGAACCCAAGGTCTATCCGCGTTC
GATCAGCGGCGTGTTCCAGCGCTGGCGCTGGGTCTTCGCCTGGCTGACGCAAATCGTCTTCTACGGCCTGTGCTGGCTGC
CCTGGAACGGCCGCCAGGCGGTGCTGTTCGACCTCGACGCGCGCCGCTTCTACGTCTTCGACTTCGTGCTGTGGCCGCAG
GACACCATCTACCTCGCGGTGCTGCTGGTGATTTCGGCGCTGGCGCTGTTCCTGTTCACCACGGTGGCGGGGCGCGTGTG
GTGCGGCTACACCTGTCCGCAGACGGTCTATACCGAACTCTTCCTGTGGATAGAGAAGACCATCGAGGGCGACCGCGCGA
AGCGCATGAAGCTGGATGCCGCGGCGTGGACGCCGCGCAAGGTCGGGCTGAAGACCGCCAAGCACGCGGTCTGGCTGCTG
GTGGCGCTGTGGACCGGCTTCACCTTCGTCGGCTATTTCACGCCGATCCGCGAACTCGCGGCCGAGGCGATGACGCTGTC
GCTGTCCGGCTGGGAAACCTTCTGGGTGCTGTTCTACGGCGCCGCCACCTATGGCAACGCCGGCTTCATGCGCGAGCAGA
TGTGCAAGTACATCTGCCCCTACGCCCAGTTCCAGTTCGTGATGTTCGACCCCGACACCCTGATCGTGGCCTACGACGAG
GAACGCGGCGAGCCGCGCGGCGGGCGCTCGAAGAAGGTGGATGCGCGCGGCAAGGGGCTGGGCGACTGCATCGACTGCAG
CATGTGCGTGCAGGTCTGCCCCACCGGCATCGACATCCGCAACGGCCTGCAACTGGAGTGCATCGGCTGCGCCGCCTGCA
TCGACGCCTGCGACCAGGTGATGGACAAGATGAACTACCCGCGCGGGCTGATCCGCTACTCCACCGAGAACGCGGTGAAG
CAGCACAGCACGCGCGCCACCATCCTGCGTCGCGCCGTGCGGCCGCGGGTGCTGGTCTATAGCGCAGTGTTCGTGGCGCT
GCTCGGCGGCACCGTGTGGTCGCTTGCCACCCGCATGCCGCTCAAGCTCGACATCCAGCGCGACCGCGCCACGCTGGCGA
GCGAGGCGGCCGACGGCTCCATTGAAAATACTTTCCGTCTGCAACTCATCAACGCGAGCGAGCAGCCGCGCACCTATGCT
GTAACCGTGGACGGGCTGGAAGGCATCCACCTCGCGGAGCGCATGGAGGTGCAGGTCGCGCCGGCGTCCACCGCCGCCGC
CACCGCGCAGGTGCGGGTGGAGGCGGGCGCGGCGGCGCCGGGTGCGCACCCGATCCGCTTCACCGTGACGGACACCGCCA
ACGCCGGCGTCCGCGTCAGCGAGACCGCCAGGTTCTGGATGCCCTAG

Upstream 100 bases:

>100_bases
CTGGTAGTCTCAAAGCTGCATAGGAAATGCAGCTTATGCGCGCTGGCAACGCCGCCGGCAACGGTCCGTCTTTCCTTACC
GTGCCATGCGGCGCCTCTCC

Downstream 100 bases:

>100_bases
CCGCGGCGAGCAACGCAGCAAGGAGGACGGCCCGATGAATCAGCGCCTTTCGGTGCAGAAGGACAAGCTCAACGTGGTGC
TGTTCGAAGGCATCCACGCC

Product: putative iron-sulfur 4Fe-4S ferredoxin transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 468; Mature: 467

Protein sequence:

>468_residues
MSEPTKSQRVINIQPLFASEPKVYPRSISGVFQRWRWVFAWLTQIVFYGLCWLPWNGRQAVLFDLDARRFYVFDFVLWPQ
DTIYLAVLLVISALALFLFTTVAGRVWCGYTCPQTVYTELFLWIEKTIEGDRAKRMKLDAAAWTPRKVGLKTAKHAVWLL
VALWTGFTFVGYFTPIRELAAEAMTLSLSGWETFWVLFYGAATYGNAGFMREQMCKYICPYAQFQFVMFDPDTLIVAYDE
ERGEPRGGRSKKVDARGKGLGDCIDCSMCVQVCPTGIDIRNGLQLECIGCAACIDACDQVMDKMNYPRGLIRYSTENAVK
QHSTRATILRRAVRPRVLVYSAVFVALLGGTVWSLATRMPLKLDIQRDRATLASEAADGSIENTFRLQLINASEQPRTYA
VTVDGLEGIHLAERMEVQVAPASTAAATAQVRVEAGAAAPGAHPIRFTVTDTANAGVRVSETARFWMP

Sequences:

>Translated_468_residues
MSEPTKSQRVINIQPLFASEPKVYPRSISGVFQRWRWVFAWLTQIVFYGLCWLPWNGRQAVLFDLDARRFYVFDFVLWPQ
DTIYLAVLLVISALALFLFTTVAGRVWCGYTCPQTVYTELFLWIEKTIEGDRAKRMKLDAAAWTPRKVGLKTAKHAVWLL
VALWTGFTFVGYFTPIRELAAEAMTLSLSGWETFWVLFYGAATYGNAGFMREQMCKYICPYAQFQFVMFDPDTLIVAYDE
ERGEPRGGRSKKVDARGKGLGDCIDCSMCVQVCPTGIDIRNGLQLECIGCAACIDACDQVMDKMNYPRGLIRYSTENAVK
QHSTRATILRRAVRPRVLVYSAVFVALLGGTVWSLATRMPLKLDIQRDRATLASEAADGSIENTFRLQLINASEQPRTYA
VTVDGLEGIHLAERMEVQVAPASTAAATAQVRVEAGAAAPGAHPIRFTVTDTANAGVRVSETARFWMP
>Mature_467_residues
SEPTKSQRVINIQPLFASEPKVYPRSISGVFQRWRWVFAWLTQIVFYGLCWLPWNGRQAVLFDLDARRFYVFDFVLWPQD
TIYLAVLLVISALALFLFTTVAGRVWCGYTCPQTVYTELFLWIEKTIEGDRAKRMKLDAAAWTPRKVGLKTAKHAVWLLV
ALWTGFTFVGYFTPIRELAAEAMTLSLSGWETFWVLFYGAATYGNAGFMREQMCKYICPYAQFQFVMFDPDTLIVAYDEE
RGEPRGGRSKKVDARGKGLGDCIDCSMCVQVCPTGIDIRNGLQLECIGCAACIDACDQVMDKMNYPRGLIRYSTENAVKQ
HSTRATILRRAVRPRVLVYSAVFVALLGGTVWSLATRMPLKLDIQRDRATLASEAADGSIENTFRLQLINASEQPRTYAV
TVDGLEGIHLAERMEVQVAPASTAAATAQVRVEAGAAAPGAHPIRFTVTDTANAGVRVSETARFWMP

Specific function: FixG is predicted to be involved in a redox process. The four proteins fixG, fixH, fixI, and fixS may participate in a membrane-bound complex coupling the fixI cation pump with a redox process catalyzed by fixG [H]

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR014116
- InterPro:   IPR012285
- InterPro:   IPR013783 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52472; Mature: 52341

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPTKSQRVINIQPLFASEPKVYPRSISGVFQRWRWVFAWLTQIVFYGLCWLPWNGRQA
CCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEE
VLFDLDARRFYVFDFVLWPQDTIYLAVLLVISALALFLFTTVAGRVWCGYTCPQTVYTEL
EEEEECCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHH
FLWIEKTIEGDRAKRMKLDAAAWTPRKVGLKTAKHAVWLLVALWTGFTFVGYFTPIRELA
HHHHHHHHCCCCHHHEEECCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEAMTLSLSGWETFWVLFYGAATYGNAGFMREQMCKYICPYAQFQFVMFDPDTLIVAYDE
HHHHEEEECCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCHHEEEEEECCCEEEEEEEC
ERGEPRGGRSKKVDARGKGLGDCIDCSMCVQVCPTGIDIRNGLQLECIGCAACIDACDQV
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHH
MDKMNYPRGLIRYSTENAVKQHSTRATILRRAVRPRVLVYSAVFVALLGGTVWSLATRMP
HHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
LKLDIQRDRATLASEAADGSIENTFRLQLINASEQPRTYAVTVDGLEGIHLAERMEVQVA
EEEEECHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCHHHHEEEEEE
PASTAAATAQVRVEAGAAAPGAHPIRFTVTDTANAGVRVSETARFWMP
CCCCHHHEEEEEEECCCCCCCCCCEEEEEECCCCCCEEEECCEECCCC
>Mature Secondary Structure 
SEPTKSQRVINIQPLFASEPKVYPRSISGVFQRWRWVFAWLTQIVFYGLCWLPWNGRQA
CCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEE
VLFDLDARRFYVFDFVLWPQDTIYLAVLLVISALALFLFTTVAGRVWCGYTCPQTVYTEL
EEEEECCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHH
FLWIEKTIEGDRAKRMKLDAAAWTPRKVGLKTAKHAVWLLVALWTGFTFVGYFTPIRELA
HHHHHHHHCCCCHHHEEECCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEAMTLSLSGWETFWVLFYGAATYGNAGFMREQMCKYICPYAQFQFVMFDPDTLIVAYDE
HHHHEEEECCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCHHEEEEEECCCEEEEEEEC
ERGEPRGGRSKKVDARGKGLGDCIDCSMCVQVCPTGIDIRNGLQLECIGCAACIDACDQV
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHH
MDKMNYPRGLIRYSTENAVKQHSTRATILRRAVRPRVLVYSAVFVALLGGTVWSLATRMP
HHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
LKLDIQRDRATLASEAADGSIENTFRLQLINASEQPRTYAVTVDGLEGIHLAERMEVQVA
EEEEECHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCHHHHEEEEEE
PASTAAATAQVRVEAGAAAPGAHPIRFTVTDTANAGVRVSETARFWMP
CCCCHHHEEEEEEECCCCCCCCCCEEEEEECCCCCCEEEECCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2536685; 11481432 [H]