| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is 119899392
Identifier: 119899392
GI number: 119899392
Start: 3410759
End: 3411988
Strand: Reverse
Name: 119899392
Synonym: azo3102
Alternate gene names: NA
Gene position: 3411988-3410759 (Counterclockwise)
Preceding gene: 119899394
Following gene: 119899390
Centisome position: 77.97
GC content: 71.79
Gene sequence:
>1230_bases ATGGCTGCAACGGCGCGGCCGGCGTTCCTTCCGTTTCCATGCTCGCCAGGCTCATCGTTGAAGACACCCGCCTCCTTGCT CGCCTTCCTTTCCGGCTTTCTGCCCGACCAGCAGCGCGTCAATGGCGTCGAGCGCCTGCGCGCCGGTTTCGGCGCACTGC TCGGCATCCTCGCCACCGCGCTGCTCGGGCGCCTGTTCGTCGATGCCGACGCGGCCCTGCCGTGGATCATCGCGCCGATG GGTGCGTCCGCGGTGCTGCTGTTCGCGGTGCCGGCCAGCCCGCTCGCGCAGCCGTGGGCGATGCTGGGCGGCAACCTGGT CGCCGCTGCCGTCGGTGTCACCTGCGCACACGGCTTTCCGGCGCCGGCGGTGGCCGCCGCCGCGGCGGTGTCGGTGGCGA TCGGGCTGATGTTCGTGCTGCGCTGCATCCACCCGCCGGCCGGCGCGGTGGCGCTGACCGCGGTGGTCGGCGGCCCGGCG ATCCACGACATGGGCTACGGCTTCATCGTCTATCCGGTGCTGCTGAATTCGCTCTGCCTGCTGCTGCTGGCGATGCTGTA CAACCGCGCCACCGGCCGCGAATACCCGCAGCGCAAGGCGGTGATCGCCGCCACCGCGCCGGCGCCGGCGGCGCCCGCGC CACGGCAGGGCGTGTCGGAACAGGACCTGGACGCGGTGCTGGACGAATACAACCAGGTGCTCGACATCAGCCGCGAGGAC CTGCGCGACCTCTTCATGCGCGCCGAGGCGCACGCCTACCGCCGCCGCTTCGGCACCGTGCGCTGCCACGAAGTGATGAC GCGAGAGGTGGTGGCGGTGGAGTACGGCACGCTGCTGGAGGACGCCTGGGCGCTGATGCGTGCCCACCACGTCAAGGCGC TGCCGGTGGTGAACCGCGCGCGCCGGGTGATCGGCATCCTCACCCTGGCCGACTTCATGCGCCAGGCCGACCTCACGGTG TACCGCGGCTTCGACGACCGCCTGCGCGACTTCATCCGCAGGAGCGGCCGCAGCCACGCCGACAAGGCCGAGGTGGCGGG GCAGATCATGAGCGCGCCGGCGCAGACCGCCAACGAGAACACCCCGGTGGTGGAACTCATCGCGCTGCTCGGCGGTGCCG GCCACAGCCACGTGCCCATCGTGGATGACGACGGCCGCCTCACCGGCATCGTCGCGCCGCGCGACCTGATCGCCGAGTTC TACCAGGGCCGGCTTGCGGCCGCGGCCTGA
Upstream 100 bases:
>100_bases GGGCTTGACCGGTGTCATATCCACCCCGCGCGGGGCGTGTTCGAATCCGCGCGCAGGCTTTTCCGGTCCTGCACCCGGGC GCAAGGGCGCGCCCACCCCG
Downstream 100 bases:
>100_bases ATCAGCCGATGCGCCCGCCGCCCGCCGCGCGCGGCGCGAAGGCGAGCACACGGGTGCTGCCGTCCGGGCGCTGCAGCAGG TCGGCCAGGGTGTAGCCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: CBS Domain Containing Membrane Protein; HPP Family Protein; CBS Domain-Containing Membrane Protein; Cbs Domain Containing Membrane Protein; CbsHpp; HPP Family Protein+B; HPP Domain-Containing Protein; HPP Family/CBS Domain-Containing Protein; HPP Domain And CBS Domain Pair-Containing Protein; Transmembrane Protein; Tryptophan Synthase Alpha Chain; CBS Domain Pair Family; CBS-Domain-Containing Membrane Protein; Signal Transduction Protein; Conserved Protein; Signal-Transduction Protein; HPP Family; HPP Domain Protein
Number of amino acids: Translated: 409; Mature: 408
Protein sequence:
>409_residues MAATARPAFLPFPCSPGSSLKTPASLLAFLSGFLPDQQRVNGVERLRAGFGALLGILATALLGRLFVDADAALPWIIAPM GASAVLLFAVPASPLAQPWAMLGGNLVAAAVGVTCAHGFPAPAVAAAAAVSVAIGLMFVLRCIHPPAGAVALTAVVGGPA IHDMGYGFIVYPVLLNSLCLLLLAMLYNRATGREYPQRKAVIAATAPAPAAPAPRQGVSEQDLDAVLDEYNQVLDISRED LRDLFMRAEAHAYRRRFGTVRCHEVMTREVVAVEYGTLLEDAWALMRAHHVKALPVVNRARRVIGILTLADFMRQADLTV YRGFDDRLRDFIRRSGRSHADKAEVAGQIMSAPAQTANENTPVVELIALLGGAGHSHVPIVDDDGRLTGIVAPRDLIAEF YQGRLAAAA
Sequences:
>Translated_409_residues MAATARPAFLPFPCSPGSSLKTPASLLAFLSGFLPDQQRVNGVERLRAGFGALLGILATALLGRLFVDADAALPWIIAPM GASAVLLFAVPASPLAQPWAMLGGNLVAAAVGVTCAHGFPAPAVAAAAAVSVAIGLMFVLRCIHPPAGAVALTAVVGGPA IHDMGYGFIVYPVLLNSLCLLLLAMLYNRATGREYPQRKAVIAATAPAPAAPAPRQGVSEQDLDAVLDEYNQVLDISRED LRDLFMRAEAHAYRRRFGTVRCHEVMTREVVAVEYGTLLEDAWALMRAHHVKALPVVNRARRVIGILTLADFMRQADLTV YRGFDDRLRDFIRRSGRSHADKAEVAGQIMSAPAQTANENTPVVELIALLGGAGHSHVPIVDDDGRLTGIVAPRDLIAEF YQGRLAAAA >Mature_408_residues AATARPAFLPFPCSPGSSLKTPASLLAFLSGFLPDQQRVNGVERLRAGFGALLGILATALLGRLFVDADAALPWIIAPMG ASAVLLFAVPASPLAQPWAMLGGNLVAAAVGVTCAHGFPAPAVAAAAAVSVAIGLMFVLRCIHPPAGAVALTAVVGGPAI HDMGYGFIVYPVLLNSLCLLLLAMLYNRATGREYPQRKAVIAATAPAPAAPAPRQGVSEQDLDAVLDEYNQVLDISREDL RDLFMRAEAHAYRRRFGTVRCHEVMTREVVAVEYGTLLEDAWALMRAHHVKALPVVNRARRVIGILTLADFMRQADLTVY RGFDDRLRDFIRRSGRSHADKAEVAGQIMSAPAQTANENTPVVELIALLGGAGHSHVPIVDDDGRLTGIVAPRDLIAEFY QGRLAAAA
Specific function: Unknown
COG id: COG3448
COG function: function code T; CBS-domain-containing membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43384; Mature: 43253
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAATARPAFLPFPCSPGSSLKTPASLLAFLSGFLPDQQRVNGVERLRAGFGALLGILATA CCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LLGRLFVDADAALPWIIAPMGASAVLLFAVPASPLAQPWAMLGGNLVAAAVGVTCAHGFP HHHHHHHCCCCCCCEEEECCCCCEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHCCCCC APAVAAAAAVSVAIGLMFVLRCIHPPAGAVALTAVVGGPAIHDMGYGFIVYPVLLNSLCL HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHH LLLAMLYNRATGREYPQRKAVIAATAPAPAAPAPRQGVSEQDLDAVLDEYNQVLDISRED HHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHH LRDLFMRAEAHAYRRRFGTVRCHEVMTREVVAVEYGTLLEDAWALMRAHHVKALPVVNRA HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRVIGILTLADFMRQADLTVYRGFDDRLRDFIRRSGRSHADKAEVAGQIMSAPAQTANEN HHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHCCCCC TPVVELIALLGGAGHSHVPIVDDDGRLTGIVAPRDLIAEFYQGRLAAAA CHHHHHHHHHCCCCCCCCCEECCCCCEEEEECCHHHHHHHHCCHHHCCC >Mature Secondary Structure AATARPAFLPFPCSPGSSLKTPASLLAFLSGFLPDQQRVNGVERLRAGFGALLGILATA CCCCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LLGRLFVDADAALPWIIAPMGASAVLLFAVPASPLAQPWAMLGGNLVAAAVGVTCAHGFP HHHHHHHCCCCCCCEEEECCCCCEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHCCCCC APAVAAAAAVSVAIGLMFVLRCIHPPAGAVALTAVVGGPAIHDMGYGFIVYPVLLNSLCL HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHH LLLAMLYNRATGREYPQRKAVIAATAPAPAAPAPRQGVSEQDLDAVLDEYNQVLDISRED HHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHH LRDLFMRAEAHAYRRRFGTVRCHEVMTREVVAVEYGTLLEDAWALMRAHHVKALPVVNRA HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRVIGILTLADFMRQADLTVYRGFDDRLRDFIRRSGRSHADKAEVAGQIMSAPAQTANEN HHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHCCCCC TPVVELIALLGGAGHSHVPIVDDDGRLTGIVAPRDLIAEFYQGRLAAAA CHHHHHHHHHCCCCCCCCCEECCCCCEEEEECCHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA