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The map label for this gene is ydjR [C]

Identifier: 119899297

GI number: 119899297

Start: 3305177

End: 3305785

Strand: Direct

Name: ydjR [C]

Synonym: azo3007

Alternate gene names: 119899297

Gene position: 3305177-3305785 (Clockwise)

Preceding gene: 119899296

Following gene: 119899298

Centisome position: 75.53

GC content: 76.19

Gene sequence:

>609_bases
ATGACTGCCGCCGCAGCGCGCCCCTTCGTGCTCGCCGCCATCGCGCCGCAACCGTGGCGCAACGGCGGCGGCGCCACCCG
CGAGATCCTGTGCGCGCCCTCGGCGGACGGCGAGGGCTGGGACTGGCGGGTGAGCGTGGCCGAGATCGAGCAGCCCGGCG
CCTTCTCGGTGTTCGCCGGGGTGGACCGCACGGCGCTGCTGCTCGACGGCGCCGGGCTGGCCCTGCACGGCAGCGCGCCG
CAACCGCCGCTGGTGTTCGCCGCAGCCGGCTGCGTGCACCGCTTTGCCGGCGAAACCGCGCTCGCCGCCCGCCTCGGCGG
CGGACCGGCGCGGCTCTTCAACGTGATGACCCGCCGCAGCCGGGCCAGCGCCGTGCTCGGCACACACACGGGCGACGGCG
CGCTGGATCTGGGTGACGCGGCCGCCACGGTGCTGTTCGTCACTCGCGGCCGCTTCGCCCTGACCCTCGACGCCGCGGCC
GGCTACCGCCTGCAAGCCGGCCACGGCCTGTGCCTCGACGGCGACTCCGCGCAGCCCGTGCGGCACGCCTGCCTGCAGGC
GCTGCAGCCGGATGCCAGCCTGATCCAGGTCTCCTTCCACCGGCACTGA

Upstream 100 bases:

>100_bases
TCTTCCAGATCGCCGACTACGGCATCGTCGGCGATCTGTTCGAAGCGCTGCCGGTGCTGCAGGCGCAGCTCGCGGCCGCG
GCCGCCTGAGCCGGTCGGCG

Downstream 100 bases:

>100_bases
CGCCACCGACATCGCCATGACCCCGCAAGACCTCCTCGACCACTACGGCCCGCGCGAATCCACCACCTACGACGTCGCCA
TCGTCGGTGCCGGCCCGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MTAAAARPFVLAAIAPQPWRNGGGATREILCAPSADGEGWDWRVSVAEIEQPGAFSVFAGVDRTALLLDGAGLALHGSAP
QPPLVFAAAGCVHRFAGETALAARLGGGPARLFNVMTRRSRASAVLGTHTGDGALDLGDAAATVLFVTRGRFALTLDAAA
GYRLQAGHGLCLDGDSAQPVRHACLQALQPDASLIQVSFHRH

Sequences:

>Translated_202_residues
MTAAAARPFVLAAIAPQPWRNGGGATREILCAPSADGEGWDWRVSVAEIEQPGAFSVFAGVDRTALLLDGAGLALHGSAP
QPPLVFAAAGCVHRFAGETALAARLGGGPARLFNVMTRRSRASAVLGTHTGDGALDLGDAAATVLFVTRGRFALTLDAAA
GYRLQAGHGLCLDGDSAQPVRHACLQALQPDASLIQVSFHRH
>Mature_201_residues
TAAAARPFVLAAIAPQPWRNGGGATREILCAPSADGEGWDWRVSVAEIEQPGAFSVFAGVDRTALLLDGAGLALHGSAPQ
PPLVFAAAGCVHRFAGETALAARLGGGPARLFNVMTRRSRASAVLGTHTGDGALDLGDAAATVLFVTRGRFALTLDAAAG
YRLQAGHGLCLDGDSAQPVRHACLQALQPDASLIQVSFHRH

Specific function: Unknown

COG id: COG3758

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ydjR [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR010282 [H]

Pfam domain/function: PF05962 HutD [H]

EC number: NA

Molecular weight: Translated: 20783; Mature: 20652

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAAAARPFVLAAIAPQPWRNGGGATREILCAPSADGEGWDWRVSVAEIEQPGAFSVFAG
CCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCEEEEEC
VDRTALLLDGAGLALHGSAPQPPLVFAAAGCVHRFAGETALAARLGGGPARLFNVMTRRS
CCCEEEEEECCCEEEECCCCCCCEEEEHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHC
RASAVLGTHTGDGALDLGDAAATVLFVTRGRFALTLDAAAGYRLQAGHGLCLDGDSAQPV
CCCEEEECCCCCCCEECCCHHEEEEEEECCCEEEEEECCCCEEEECCCEEEEECCCCCHH
RHACLQALQPDASLIQVSFHRH
HHHHHHHHCCCCEEEEEEEECC
>Mature Secondary Structure 
TAAAARPFVLAAIAPQPWRNGGGATREILCAPSADGEGWDWRVSVAEIEQPGAFSVFAG
CCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCEEEEEC
VDRTALLLDGAGLALHGSAPQPPLVFAAAGCVHRFAGETALAARLGGGPARLFNVMTRRS
CCCEEEEEECCCEEEECCCCCCCEEEEHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHC
RASAVLGTHTGDGALDLGDAAATVLFVTRGRFALTLDAAAGYRLQAGHGLCLDGDSAQPV
CCCEEEECCCCCCCEECCCHHEEEEEEECCCEEEEEECCCCEEEECCCEEEEECCCCCHH
RHACLQALQPDASLIQVSFHRH
HHHHHHHHCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2203753 [H]