| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is map [H]
Identifier: 119898201
GI number: 119898201
Start: 2093581
End: 2094399
Strand: Direct
Name: map [H]
Synonym: azo1910
Alternate gene names: 119898201
Gene position: 2093581-2094399 (Clockwise)
Preceding gene: 119898183
Following gene: 119898202
Centisome position: 47.84
GC content: 64.1
Gene sequence:
>819_bases ATGAGCATTACCCTCAAGACCGCAGAAGAAATCGAAAAGATGCGGCTGGCCTGCCGCCTGGCTGCCGAAGTGCTCGACCA CGTCGAGCCCTACGTGAAACCCGGCGTGACCACGGCCGAACTGGACAGGATCTGCCATGAGTACATGGTGAACGTCCAGC ACACGGTACCCGCCCCCCTCAACTACGCGCCGCCGGGTTACACGCCCTACCCCAAGTCGATCTGCACCTCGGTGAACCAC CAGGTCTGCCATGGTATTCCCGGCGACAAGGCGCTCAAGAAAGGCGACATCGTCAACCTCGACATCACCGTCATCACCGA AGACGGTTTTCACGGCGATACCAGCCGGATGTTCATCGTCGGCGGTGACGGCGCCATCCTTGCCAAGCGCCTGTGCCAGG TGACGTTCGAATGCCTGTGGCTGGGCATCGCCGCGGTGCGCCCGGGCGCGAGGCTCGGCGACATCGGCGCGGTCATCCAG AAGCACGCCGAGGGCAATGGTTTTTCGGTGGTGCGCGAATTCTGCGGTCACGGCATCGGACGCAAGTTCCACGAGGAGCC GCAGGTGCTGCACTACGGCAAGGCCGGCACCGGCGTGGAACTGAAGCCCGGCATGATCTTCACGATCGAGCCGATGATCA ATGCCGGCAAAGCGGCGATTTCCGAACTGCCCGACGGCTGGACCATCGTGACCAAGGACCGCAGCCTGTCGGCGCAGTGG GAGCACACCATTCTGGTGACCGAGACGGGCGTGGAGGTGCTGACCCTGTCGGCCAAGTGCCCGCCGCCCCCGCCCCTGGT CGCGGCGTCGTTTGCCTGA
Upstream 100 bases:
>100_bases GTTAGCACGCGCGGGTTAAGCCGCTCAAGGCGGCCGGCCGCTGCGTTTGCCCGAACACTGCCCATGCGCTAGCCTTGTGA CCTTTTGAGCCCCCACCCCG
Downstream 100 bases:
>100_bases CTTGCCGCCGGGTTCCGCGATGAACGACATGGTGATCTCCATCGACGCGCTGCAGGGCGCGATCGGCGAGGCGCGGCGCG AGCTGGCTGAGGGCAACGCC
Product: methionine aminopeptidase
Products: NA
Alternate protein names: MAP; Peptidase M [H]
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MSITLKTAEEIEKMRLACRLAAEVLDHVEPYVKPGVTTAELDRICHEYMVNVQHTVPAPLNYAPPGYTPYPKSICTSVNH QVCHGIPGDKALKKGDIVNLDITVITEDGFHGDTSRMFIVGGDGAILAKRLCQVTFECLWLGIAAVRPGARLGDIGAVIQ KHAEGNGFSVVREFCGHGIGRKFHEEPQVLHYGKAGTGVELKPGMIFTIEPMINAGKAAISELPDGWTIVTKDRSLSAQW EHTILVTETGVEVLTLSAKCPPPPPLVAASFA
Sequences:
>Translated_272_residues MSITLKTAEEIEKMRLACRLAAEVLDHVEPYVKPGVTTAELDRICHEYMVNVQHTVPAPLNYAPPGYTPYPKSICTSVNH QVCHGIPGDKALKKGDIVNLDITVITEDGFHGDTSRMFIVGGDGAILAKRLCQVTFECLWLGIAAVRPGARLGDIGAVIQ KHAEGNGFSVVREFCGHGIGRKFHEEPQVLHYGKAGTGVELKPGMIFTIEPMINAGKAAISELPDGWTIVTKDRSLSAQW EHTILVTETGVEVLTLSAKCPPPPPLVAASFA >Mature_271_residues SITLKTAEEIEKMRLACRLAAEVLDHVEPYVKPGVTTAELDRICHEYMVNVQHTVPAPLNYAPPGYTPYPKSICTSVNHQ VCHGIPGDKALKKGDIVNLDITVITEDGFHGDTSRMFIVGGDGAILAKRLCQVTFECLWLGIAAVRPGARLGDIGAVIQK HAEGNGFSVVREFCGHGIGRKFHEEPQVLHYGKAGTGVELKPGMIFTIEPMINAGKAAISELPDGWTIVTKDRSLSAQWE HTILVTETGVEVLTLSAKCPPPPPLVAASFA
Specific function: Removes the amino-terminal methionine from nascent proteins [H]
COG id: COG0024
COG function: function code J; Methionine aminopeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24A family [H]
Homologues:
Organism=Homo sapiens, GI164420681, Length=256, Percent_Identity=51.171875, Blast_Score=248, Evalue=6e-66, Organism=Homo sapiens, GI40385867, Length=254, Percent_Identity=40.9448818897638, Blast_Score=190, Evalue=1e-48, Organism=Escherichia coli, GI1786364, Length=257, Percent_Identity=64.9805447470817, Blast_Score=335, Evalue=2e-93, Organism=Escherichia coli, GI1788728, Length=217, Percent_Identity=27.1889400921659, Blast_Score=76, Evalue=3e-15, Organism=Caenorhabditis elegans, GI71996291, Length=253, Percent_Identity=49.0118577075099, Blast_Score=238, Evalue=2e-63, Organism=Saccharomyces cerevisiae, GI6323273, Length=264, Percent_Identity=45.4545454545455, Blast_Score=229, Evalue=4e-61, Organism=Drosophila melanogaster, GI21355531, Length=253, Percent_Identity=49.0118577075099, Blast_Score=220, Evalue=6e-58, Organism=Drosophila melanogaster, GI24583427, Length=254, Percent_Identity=42.1259842519685, Blast_Score=196, Evalue=1e-50,
Paralogues:
None
Copy number: 3,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR002467 [H]
Pfam domain/function: PF00557 Peptidase_M24 [H]
EC number: =3.4.11.18 [H]
Molecular weight: Translated: 29356; Mature: 29225
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: PS00680 MAP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSITLKTAEEIEKMRLACRLAAEVLDHVEPYVKPGVTTAELDRICHEYMVNVQHTVPAPL CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCC NYAPPGYTPYPKSICTSVNHQVCHGIPGDKALKKGDIVNLDITVITEDGFHGDTSRMFIV CCCCCCCCCCCHHHHHHCCHHHHCCCCCCHHHCCCCEEEEEEEEEECCCCCCCCCEEEEE GGDGAILAKRLCQVTFECLWLGIAAVRPGARLGDIGAVIQKHAEGNGFSVVREFCGHGIG ECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCC RKFHEEPQVLHYGKAGTGVELKPGMIFTIEPMINAGKAAISELPDGWTIVTKDRSLSAQW CHHCCCCCEEEECCCCCCCEECCCEEEEECCCCCCHHHHHHHCCCCCEEEEECCCCCCCC EHTILVTETGVEVLTLSAKCPPPPPLVAASFA CEEEEEEECCCEEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure SITLKTAEEIEKMRLACRLAAEVLDHVEPYVKPGVTTAELDRICHEYMVNVQHTVPAPL EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCC NYAPPGYTPYPKSICTSVNHQVCHGIPGDKALKKGDIVNLDITVITEDGFHGDTSRMFIV CCCCCCCCCCCHHHHHHCCHHHHCCCCCCHHHCCCCEEEEEEEEEECCCCCCCCCEEEEE GGDGAILAKRLCQVTFECLWLGIAAVRPGARLGDIGAVIQKHAEGNGFSVVREFCGHGIG ECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCC RKFHEEPQVLHYGKAGTGVELKPGMIFTIEPMINAGKAAISELPDGWTIVTKDRSLSAQW CHHCCCCCEEEECCCCCCCEECCCEEEEECCCCCCHHHHHHHCCCCCEEEEECCCCCCCC EHTILVTETGVEVLTLSAKCPPPPPLVAASFA CEEEEEEECCCEEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]