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The map label for this gene is recO

Identifier: 119897935

GI number: 119897935

Start: 1804142

End: 1804873

Strand: Direct

Name: recO

Synonym: azo1644

Alternate gene names: 119897935

Gene position: 1804142-1804873 (Clockwise)

Preceding gene: 119897934

Following gene: 119897936

Centisome position: 41.23

GC content: 66.39

Gene sequence:

>732_bases
GTGGCGGTCAAGCAGCGCATCGACCAACAGTCGGCCTGGGTGCTGCACACGCTGCCGTGGCGCGAAACCAGCCTGATCGT
CGAGGTCTTTTCGCGGGATCACGGCCGCCTGGCGCTGGTGGCAAAGGGCGCGCGCAGGCCGCATTCCGCTTTTCGTGGCG
TGCTGATGGCGTTCCAGCCCTTGTTGATGGATTGGTCTGGCGGAGGCGAGGTGCGCACGCTGGTCCGTGCCGAATGGCAA
GGCGGCCAACCGCTGCTGACCGGCCAGGCCTTGCTGTGCGGCTATTACCTCAACGAGTTGCTGGTCAAACTCACCCCGCG
CGACGATCCCCATCCCAACCTCTTCGTCGCCTATGCCGACGCAGTGCGCGAACTTGGCCTCGGCAGACCGCCGCCGCCGG
TGTTGCGCCAGTTCGAGCTCGCGCTGTTGCAGGAACTTGGCTACGGCATCGAACTGGTCCATGACGTGCAGAGCGGCGAG
GCCGTCCGGGGCGATGCGACCTACGCTTATATAATCGAAGGCGGTCCGGCGGCGCTGGACGCGCCCGGCGATGCCCCGCC
GGATCTGCCGGTGGTGAGCGGCCAGACCCTGCTCGACATGGCCGCCGGCGACTTTTCCCGCAGCGAGACGCTGGCCCAGT
CCAAGCGGCTGCTGCGTGTGTTGATCAATCACTATCTCGGCGGACAGCCGCTGCAGTCCCGCCGCGTCCTTCAGGAGTTG
CTCGAACTGTGA

Upstream 100 bases:

>100_bases
CCTCGAGGTGTGGGTCAAGGTCAAGAGCGGCTGGGCGGACGACGAACGCGCGCTGAAGAGCCTCGGCTACGAGTAAGCGC
CGGAGCGGGGACGGCACGCG

Downstream 100 bases:

>100_bases
TCGAACTCGGCGTCAATATCGACCACGTCGCCACGCTGCGCCAGGCGCGCCGCACCTGGGAGCCGGACCCGACCTGGGCC
GCGGTAGAAGCCCATCTCGG

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MAVKQRIDQQSAWVLHTLPWRETSLIVEVFSRDHGRLALVAKGARRPHSAFRGVLMAFQPLLMDWSGGGEVRTLVRAEWQ
GGQPLLTGQALLCGYYLNELLVKLTPRDDPHPNLFVAYADAVRELGLGRPPPPVLRQFELALLQELGYGIELVHDVQSGE
AVRGDATYAYIIEGGPAALDAPGDAPPDLPVVSGQTLLDMAAGDFSRSETLAQSKRLLRVLINHYLGGQPLQSRRVLQEL
LEL

Sequences:

>Translated_243_residues
MAVKQRIDQQSAWVLHTLPWRETSLIVEVFSRDHGRLALVAKGARRPHSAFRGVLMAFQPLLMDWSGGGEVRTLVRAEWQ
GGQPLLTGQALLCGYYLNELLVKLTPRDDPHPNLFVAYADAVRELGLGRPPPPVLRQFELALLQELGYGIELVHDVQSGE
AVRGDATYAYIIEGGPAALDAPGDAPPDLPVVSGQTLLDMAAGDFSRSETLAQSKRLLRVLINHYLGGQPLQSRRVLQEL
LEL
>Mature_242_residues
AVKQRIDQQSAWVLHTLPWRETSLIVEVFSRDHGRLALVAKGARRPHSAFRGVLMAFQPLLMDWSGGGEVRTLVRAEWQG
GQPLLTGQALLCGYYLNELLVKLTPRDDPHPNLFVAYADAVRELGLGRPPPPVLRQFELALLQELGYGIELVHDVQSGEA
VRGDATYAYIIEGGPAALDAPGDAPPDLPVVSGQTLLDMAAGDFSRSETLAQSKRLLRVLINHYLGGQPLQSRRVLQELL
EL

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

Organism=Escherichia coli, GI2367140, Length=233, Percent_Identity=40.343347639485, Blast_Score=160, Evalue=6e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_AZOSB (A1K606)

Other databases:

- EMBL:   AM406670
- RefSeq:   YP_933148.1
- ProteinModelPortal:   A1K606
- STRING:   A1K606
- GeneID:   4608674
- GenomeReviews:   AM406670_GR
- KEGG:   azo:azo1644
- eggNOG:   COG1381
- HOGENOM:   HBG645116
- OMA:   SILQPFQ
- PhylomeDB:   A1K606
- ProtClustDB:   PRK00085
- BioCyc:   ASP62928:AZO1644-MONOMER
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 26741; Mature: 26610

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVKQRIDQQSAWVLHTLPWRETSLIVEVFSRDHGRLALVAKGARRPHSAFRGVLMAFQP
CCHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHH
LLMDWSGGGEVRTLVRAEWQGGQPLLTGQALLCGYYLNELLVKLTPRDDPHPNLFVAYAD
HHHCCCCCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEHHH
AVRELGLGRPPPPVLRQFELALLQELGYGIELVHDVQSGEAVRGDATYAYIIEGGPAALD
HHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCEEEEEEECCCEEEC
APGDAPPDLPVVSGQTLLDMAAGDFSRSETLAQSKRLLRVLINHYLGGQPLQSRRVLQEL
CCCCCCCCCCEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LEL
HCC
>Mature Secondary Structure 
AVKQRIDQQSAWVLHTLPWRETSLIVEVFSRDHGRLALVAKGARRPHSAFRGVLMAFQP
CHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHH
LLMDWSGGGEVRTLVRAEWQGGQPLLTGQALLCGYYLNELLVKLTPRDDPHPNLFVAYAD
HHHCCCCCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEHHH
AVRELGLGRPPPPVLRQFELALLQELGYGIELVHDVQSGEAVRGDATYAYIIEGGPAALD
HHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCEEEEEEECCCEEEC
APGDAPPDLPVVSGQTLLDMAAGDFSRSETLAQSKRLLRVLINHYLGGQPLQSRRVLQEL
CCCCCCCCCCEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LEL
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA