| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is cvpA [H]
Identifier: 119897343
GI number: 119897343
Start: 1131554
End: 1132045
Strand: Direct
Name: cvpA [H]
Synonym: azo1052
Alternate gene names: 119897343
Gene position: 1131554-1132045 (Clockwise)
Preceding gene: 119897342
Following gene: 119897344
Centisome position: 25.86
GC content: 66.26
Gene sequence:
>492_bases ATGACGGTTTTCGACTACGCCTTCCTGGCGATCCTCGCCGTTTCGGCGTTGGTCGGCTTGTGGCGCGGCCTCGTCAGCGA AATTCTGGCGCTGGTGACCTGGGGGATCGCCCTGCTAGCCGCATGGCGCTATGCCTCGGTGGCGGCGGAACTGTTCCAGG GCCTGCTGGACGAACCGCTGTGGCGACAGGCGGCGGGTTTCGTACTGATCTTCGTCGCGATCCTGCTGATCGCGGCGCTC GTCCGCTTCCTGTTGCGCGAACTGTTGCGCGCAGCGGGATTGCGGGCCACGGACCGGTTCTTCGGCGCCCTCTTCGGGTT GGCGCGTGGGGTGCTGATCGCGTTGGCAGTGGTGTTGCTGGGCGGGCTGGTGGGGATTGCGCGTGAGCCGTGGTGGGCTA ACGCGACGTTCTCGCCACCGCTCGAAACGGCGGTGATAGCCGCCAAACCGTGGCTGCCGGAAGCGGTGGCCGCACGAATC CGATTCAGATAG
Upstream 100 bases:
>100_bases GTCGGCCCCTTTGCCAGCCGTGACGAAGCAGAGAAGGTTGCCGCGCGGCTCAAGGCGCAGGGGCGCAACGTGGTGCTGAC GCCGCGTTGACCGGATACGC
Downstream 100 bases:
>100_bases GCAGGGCTTCCATGTGCGGAATTCTTGGGGTGGTTGCGACCTCCCCGGTCAATCAGTTGCTTTACGACGGGCTCCAGGTG CTGCAGCACCGCGGACAGGA
Product: putative colicin V production protein
Products: NA
Alternate protein names: Protein dedE; Pur regulon 18 kDa protein [H]
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MTVFDYAFLAILAVSALVGLWRGLVSEILALVTWGIALLAAWRYASVAAELFQGLLDEPLWRQAAGFVLIFVAILLIAAL VRFLLRELLRAAGLRATDRFFGALFGLARGVLIALAVVLLGGLVGIAREPWWANATFSPPLETAVIAAKPWLPEAVAARI RFR
Sequences:
>Translated_163_residues MTVFDYAFLAILAVSALVGLWRGLVSEILALVTWGIALLAAWRYASVAAELFQGLLDEPLWRQAAGFVLIFVAILLIAAL VRFLLRELLRAAGLRATDRFFGALFGLARGVLIALAVVLLGGLVGIAREPWWANATFSPPLETAVIAAKPWLPEAVAARI RFR >Mature_162_residues TVFDYAFLAILAVSALVGLWRGLVSEILALVTWGIALLAAWRYASVAAELFQGLLDEPLWRQAAGFVLIFVAILLIAALV RFLLRELLRAAGLRATDRFFGALFGLARGVLIALAVVLLGGLVGIAREPWWANATFSPPLETAVIAAKPWLPEAVAARIR FR
Specific function: Required for colicin V production from plasmid IncFI ColV3-K30 [H]
COG id: COG1286
COG function: function code R; Uncharacterized membrane protein, required for colicin V production
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788652, Length=139, Percent_Identity=38.1294964028777, Blast_Score=95, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003825 [H]
Pfam domain/function: PF02674 Colicin_V [H]
EC number: NA
Molecular weight: Translated: 17698; Mature: 17567
Theoretical pI: Translated: 11.11; Mature: 11.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVFDYAFLAILAVSALVGLWRGLVSEILALVTWGIALLAAWRYASVAAELFQGLLDEPL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH WRQAAGFVLIFVAILLIAALVRFLLRELLRAAGLRATDRFFGALFGLARGVLIALAVVLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GGLVGIAREPWWANATFSPPLETAVIAAKPWLPEAVAARIRFR HHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHCCC >Mature Secondary Structure TVFDYAFLAILAVSALVGLWRGLVSEILALVTWGIALLAAWRYASVAAELFQGLLDEPL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH WRQAAGFVLIFVAILLIAALVRFLLRELLRAAGLRATDRFFGALFGLARGVLIALAVVLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GGLVGIAREPWWANATFSPPLETAVIAAKPWLPEAVAARIRFR HHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3040734; 2991286; 9205837; 9278503; 2542219 [H]