| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is dedD [C]
Identifier: 119897342
GI number: 119897342
Start: 1130902
End: 1131543
Strand: Direct
Name: dedD [C]
Synonym: azo1051
Alternate gene names: 119897342
Gene position: 1130902-1131543 (Clockwise)
Preceding gene: 119897341
Following gene: 119897343
Centisome position: 25.84
GC content: 71.03
Gene sequence:
>642_bases GTGAGCGACGCAGACAACCTTGAAATCAAGAAGCGTGCGCGCCGGCGCCTGGTGGGTGCGGCGGCGCTGGCGCTTACGGC CGCCATCGTGCTGCCGATGATGATGGAGCAGGAACCCGCCCCGTCCAGCCCGGACATCCAGGTCACCATTCCCGACCGCG ACAGCCCATCCGCGTCCGGTCGTCCCGATTCTGAGGCGCGTACGCCCGACGCGGCGCTTCCGCCGGCCCCGGTGGAAGAG CCGCCGCAGCCCGGCGTTGCCGAAGCGCCGTCCCGTCCCGCTCCCGGCGCAGCAGAGGCGCCGCGTGCCGCCAGCCCCGC CTCGCCCAGAAATGCCGGCGACGAGGAAGCCCGGGTGCGCGCCTTGCTCGACGGCAAACCGCCTGCCTCCGCCGCCGCAC CGGCAACGCCCGCGCCCGCCGCCAAGGAAGGCTACGTCCTTCAGATCGGCGCGTTCGGCGATCCGGCCAAGGCGGGATCG ATCAGTAGCGAACTCAAGCAGGCAGGGTTTTCTGCCTACACTGAAAAGGCCGGCGCGATGACGCGTGTCCGGGTCGGCCC CTTTGCCAGCCGTGACGAAGCAGAGAAGGTTGCCGCGCGGCTCAAGGCGCAGGGGCGCAACGTGGTGCTGACGCCGCGTT GA
Upstream 100 bases:
>100_bases GCGCTGCCGAGGGTGATAGAATCGTCGCCTTTGGTTCCTTCCTGACCGTGGCGAGTGTATTGGCAGCGATTCGCGCCGAG CGACACTGAGGGGTTTCCGG
Downstream 100 bases:
>100_bases CCGGATACGCATGACGGTTTTCGACTACGCCTTCCTGGCGATCCTCGCCGTTTCGGCGTTGGTCGGCTTGTGGCGCGGCC TCGTCAGCGAAATTCTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MSDADNLEIKKRARRRLVGAAALALTAAIVLPMMMEQEPAPSSPDIQVTIPDRDSPSASGRPDSEARTPDAALPPAPVEE PPQPGVAEAPSRPAPGAAEAPRAASPASPRNAGDEEARVRALLDGKPPASAAAPATPAPAAKEGYVLQIGAFGDPAKAGS ISSELKQAGFSAYTEKAGAMTRVRVGPFASRDEAEKVAARLKAQGRNVVLTPR
Sequences:
>Translated_213_residues MSDADNLEIKKRARRRLVGAAALALTAAIVLPMMMEQEPAPSSPDIQVTIPDRDSPSASGRPDSEARTPDAALPPAPVEE PPQPGVAEAPSRPAPGAAEAPRAASPASPRNAGDEEARVRALLDGKPPASAAAPATPAPAAKEGYVLQIGAFGDPAKAGS ISSELKQAGFSAYTEKAGAMTRVRVGPFASRDEAEKVAARLKAQGRNVVLTPR >Mature_212_residues SDADNLEIKKRARRRLVGAAALALTAAIVLPMMMEQEPAPSSPDIQVTIPDRDSPSASGRPDSEARTPDAALPPAPVEEP PQPGVAEAPSRPAPGAAEAPRAASPASPRNAGDEEARVRALLDGKPPASAAAPATPAPAAKEGYVLQIGAFGDPAKAGSI SSELKQAGFSAYTEKAGAMTRVRVGPFASRDEAEKVAARLKAQGRNVVLTPR
Specific function: Unknown
COG id: COG3147
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21836; Mature: 21705
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDADNLEIKKRARRRLVGAAALALTAAIVLPMMMEQEPAPSSPDIQVTIPDRDSPSASG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCC RPDSEARTPDAALPPAPVEEPPQPGVAEAPSRPAPGAAEAPRAASPASPRNAGDEEARVR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH ALLDGKPPASAAAPATPAPAAKEGYVLQIGAFGDPAKAGSISSELKQAGFSAYTEKAGAM HHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCE TRVRVGPFASRDEAEKVAARLKAQGRNVVLTPR EEEEECCCCCHHHHHHHHHHHHHCCCEEEECCC >Mature Secondary Structure SDADNLEIKKRARRRLVGAAALALTAAIVLPMMMEQEPAPSSPDIQVTIPDRDSPSASG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCC RPDSEARTPDAALPPAPVEEPPQPGVAEAPSRPAPGAAEAPRAASPASPRNAGDEEARVR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH ALLDGKPPASAAAPATPAPAAKEGYVLQIGAFGDPAKAGSISSELKQAGFSAYTEKAGAM HHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCE TRVRVGPFASRDEAEKVAARLKAQGRNVVLTPR EEEEECCCCCHHHHHHHHHHHHHCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA