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The map label for this gene is ugpB [H]

Identifier: 119897303

GI number: 119897303

Start: 1088233

End: 1089531

Strand: Direct

Name: ugpB [H]

Synonym: azo1012

Alternate gene names: 119897303

Gene position: 1088233-1089531 (Clockwise)

Preceding gene: 119897301

Following gene: 119897304

Centisome position: 24.87

GC content: 68.82

Gene sequence:

>1299_bases
ATGAACCTGCGAACCCTCAAGATCGGATTGCTCACTCTCCCGCTGGCGCTGGCCGCCGCGCTGCCGGCCATGGCCGCGTC
CTCCAAGCCAGCCCCGGCAAAGGCGGCCAAGGCCCCCGCGGCGCCGGCAGGGCCGGTCGCGATCGAACTCTTCCACCACC
TGCCGGCCGATCGCGCCGAGGCGCTTAAAGGCCTGGTGGCACGTTTCAATGCGCAGAACAACGATGCCCAGGTCGTTCTG
GTGGAGCGCGACTGGCGCAGCGGCGACGCTCCGGATCTGTTGATCCTGGAAGGCGATGACGAGGAGAGTTTCCTCGCCGG
CAAACCGCGCTACAAGCCGGTTCATGCGCTGATGAAGGAAGCCGGCGTGCCGCTGCAGACCTTGCGCCCGCCCGCGATGA
TGACCCGCACCCCGGTGGATGCGAAGGGGCAGGTGCTGGCGTTGCCGATCGGACTGACGACGCCGGTGCTGTTCGTGAAC
CGCGAGGCCTTCCGCCGCGCCGGCCTCAATCCCGACAGCGCCACGATGTCCACCTGGTTCGACCTGCAGCAGACGCTGGG
CCGTCTGGCCGGTAGCGGGCACCAGTGCCCCTATACGGTTGCCGAGCCCGCGCGCGTGATGGTCGAGAACCTCAGCGCCT
GGCACAACGAGCCGGTCGCCGCGGAGCGCGGCAAGGCCCAGGCGCCGTCGTTCAACGGCATGTTCCAGGTCAAGCACGTC
GCGATGATGGCCAGCTGGTATCGCGCCCGCTATCTGCAGATCTTCGATCGCGCGGATGCCGAACGCCGCTTCGCCGCCGG
TGAATGCGCCGTGATCGCGGCGCCGTCGGCCAGCTGGACGGATTTCCGCAAGGCTGGAGCCGACGTCGGTGTGATGCGCC
TGCCCTACTACGACGACTTCCCGGGCGCGCCGCAGAACACGATTGCAGACGGTCCCGCGCTGTGGGCTGCTGCCGGGAAA
AAGCCCGCCGAGTACAAGGTCGCGGCGCGCTTCGTGAGCTTCTGGCTGCAACCGGAAAACCAGGTCGCCTGGCAGCGCGA
GACCGGCTACCTGCCGCTCAATCGCGCCGGCCTGCTGGCCGCGCAAAGCGATCTGCTCGGGCCGGACCTGGAGAACGTCC
GGGTTGCCGTCGCCCAGCTGACCAACAAGCCGGCGACCGCCGCGTCCTCGGCTCAGCCGGTCATGCAGCGTGAGAAGGTG
CGTCGCATCCTCGACGAGGAACTCGCCGCGGTGTGGGCCGATCGCAAGCCGGCCAAGGAAGCGCTCGACACCGCCGTGGC
GCGCGCGTCCGGCATCTGA

Upstream 100 bases:

>100_bases
ACGCTTTAACGTCGCTTTGACGGTAGCGGAAATATAATCGCAGGCGCTCCCGGCGGTGTCGGTCGACGCCACCTTCCTTT
TGTTTCACGAACGAACATCC

Downstream 100 bases:

>100_bases
CGCGATGACGATCGGCTGGCCGCTGCCGCGCGTACTCGCGCACCGCTGCGGCGGCCGCCTTGCCCCGGAAAACACGCTCG
CAGGCCTCAACGCGGCAGCT

Product: putative glycerol-3-phosphate-binding periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MNLRTLKIGLLTLPLALAAALPAMAASSKPAPAKAAKAPAAPAGPVAIELFHHLPADRAEALKGLVARFNAQNNDAQVVL
VERDWRSGDAPDLLILEGDDEESFLAGKPRYKPVHALMKEAGVPLQTLRPPAMMTRTPVDAKGQVLALPIGLTTPVLFVN
REAFRRAGLNPDSATMSTWFDLQQTLGRLAGSGHQCPYTVAEPARVMVENLSAWHNEPVAAERGKAQAPSFNGMFQVKHV
AMMASWYRARYLQIFDRADAERRFAAGECAVIAAPSASWTDFRKAGADVGVMRLPYYDDFPGAPQNTIADGPALWAAAGK
KPAEYKVAARFVSFWLQPENQVAWQRETGYLPLNRAGLLAAQSDLLGPDLENVRVAVAQLTNKPATAASSAQPVMQREKV
RRILDEELAAVWADRKPAKEALDTAVARASGI

Sequences:

>Translated_432_residues
MNLRTLKIGLLTLPLALAAALPAMAASSKPAPAKAAKAPAAPAGPVAIELFHHLPADRAEALKGLVARFNAQNNDAQVVL
VERDWRSGDAPDLLILEGDDEESFLAGKPRYKPVHALMKEAGVPLQTLRPPAMMTRTPVDAKGQVLALPIGLTTPVLFVN
REAFRRAGLNPDSATMSTWFDLQQTLGRLAGSGHQCPYTVAEPARVMVENLSAWHNEPVAAERGKAQAPSFNGMFQVKHV
AMMASWYRARYLQIFDRADAERRFAAGECAVIAAPSASWTDFRKAGADVGVMRLPYYDDFPGAPQNTIADGPALWAAAGK
KPAEYKVAARFVSFWLQPENQVAWQRETGYLPLNRAGLLAAQSDLLGPDLENVRVAVAQLTNKPATAASSAQPVMQREKV
RRILDEELAAVWADRKPAKEALDTAVARASGI
>Mature_432_residues
MNLRTLKIGLLTLPLALAAALPAMAASSKPAPAKAAKAPAAPAGPVAIELFHHLPADRAEALKGLVARFNAQNNDAQVVL
VERDWRSGDAPDLLILEGDDEESFLAGKPRYKPVHALMKEAGVPLQTLRPPAMMTRTPVDAKGQVLALPIGLTTPVLFVN
REAFRRAGLNPDSATMSTWFDLQQTLGRLAGSGHQCPYTVAEPARVMVENLSAWHNEPVAAERGKAQAPSFNGMFQVKHV
AMMASWYRARYLQIFDRADAERRFAAGECAVIAAPSASWTDFRKAGADVGVMRLPYYDDFPGAPQNTIADGPALWAAAGK
KPAEYKVAARFVSFWLQPENQVAWQRETGYLPLNRAGLLAAQSDLLGPDLENVRVAVAQLTNKPATAASSAQPVMQREKV
RRILDEELAAVWADRKPAKEALDTAVARASGI

Specific function: sn-glycerol-3-phosphate and glycerophosphoryl diester- binding protein interacts with the binding protein-dependent transport system ugpACE [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=404, Percent_Identity=31.1881188118812, Blast_Score=199, Evalue=2e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 46646; Mature: 46646

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLRTLKIGLLTLPLALAAALPAMAASSKPAPAKAAKAPAAPAGPVAIELFHHLPADRAE
CCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHCCCCHHH
ALKGLVARFNAQNNDAQVVLVERDWRSGDAPDLLILEGDDEESFLAGKPRYKPVHALMKE
HHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHH
AGVPLQTLRPPAMMTRTPVDAKGQVLALPIGLTTPVLFVNREAFRRAGLNPDSATMSTWF
CCCCHHHCCCCHHHCCCCCCCCCCEEEEECCCCCCEEEECHHHHHHCCCCCCCHHHHHHH
DLQQTLGRLAGSGHQCPYTVAEPARVMVENLSAWHNEPVAAERGKAQAPSFNGMFQVKHV
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH
AMMASWYRARYLQIFDRADAERRFAAGECAVIAAPSASWTDFRKAGADVGVMRLPYYDDF
HHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCEEECCCCCCC
PGAPQNTIADGPALWAAAGKKPAEYKVAARFVSFWLQPENQVAWQRETGYLPLNRAGLLA
CCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHE
AQSDLLGPDLENVRVAVAQLTNKPATAASSAQPVMQREKVRRILDEELAAVWADRKPAKE
EHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
ALDTAVARASGI
HHHHHHHHHCCC
>Mature Secondary Structure
MNLRTLKIGLLTLPLALAAALPAMAASSKPAPAKAAKAPAAPAGPVAIELFHHLPADRAE
CCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHCCCCHHH
ALKGLVARFNAQNNDAQVVLVERDWRSGDAPDLLILEGDDEESFLAGKPRYKPVHALMKE
HHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHH
AGVPLQTLRPPAMMTRTPVDAKGQVLALPIGLTTPVLFVNREAFRRAGLNPDSATMSTWF
CCCCHHHCCCCHHHCCCCCCCCCCEEEEECCCCCCEEEECHHHHHHCCCCCCCHHHHHHH
DLQQTLGRLAGSGHQCPYTVAEPARVMVENLSAWHNEPVAAERGKAQAPSFNGMFQVKHV
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH
AMMASWYRARYLQIFDRADAERRFAAGECAVIAAPSASWTDFRKAGADVGVMRLPYYDDF
HHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCEEECCCCCCC
PGAPQNTIADGPALWAAAGKKPAEYKVAARFVSFWLQPENQVAWQRETGYLPLNRAGLLA
CCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHE
AQSDLLGPDLENVRVAVAQLTNKPATAASSAQPVMQREKVRRILDEELAAVWADRKPAKE
EHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
ALDTAVARASGI
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA