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The map label for this gene is ugpQ [H]

Identifier: 119897304

GI number: 119897304

Start: 1089536

End: 1090285

Strand: Direct

Name: ugpQ [H]

Synonym: azo1013

Alternate gene names: 119897304

Gene position: 1089536-1090285 (Clockwise)

Preceding gene: 119897303

Following gene: 119897305

Centisome position: 24.9

GC content: 70.4

Gene sequence:

>750_bases
ATGACGATCGGCTGGCCGCTGCCGCGCGTACTCGCGCACCGCTGCGGCGGCCGCCTTGCCCCGGAAAACACGCTCGCAGG
CCTCAACGCGGCAGCTGCCCTCGGCTGCCGCGGCGTCGAGTTCGACGTGATGCTGAGCGCCGACGGCATACCGGTGCTGA
TCCACGACGAAACGCTGGAGCGGACGACCGATGGCAGCGGCCCGGTGGCCGAGACCACATACGGTGCGCTTGCCTGCCTC
GACGCCGGCAGCCGGTTCTGCGCCCGATTCGCCGGAGAGCCGGTGCCGCGGCTCGACGCCGCGCTGGCGCGCTGCGCGGC
GCTGGGGCTCGCCGTCAATCTGGAACTCAAGCCTTCCACCGGCTGTGAAGCCGAAACCGGTACGGTGGTGGGGCGTGCGC
TGACTGCAAACTGGGCGACATTTGCGCCGCACCTGGTGCTGTCCTCTTTCTCGGAGCGCGCACTTGTTGCGGCCGCTGAC
GCAGCGCCGGGTTTTCTGCGTGCGCTGCTGGTGGAGCGCGTTCCGGCCGACTGGCGCGACCGCTGCGCCGCGCTGGGGGC
GGTGGCATTGCACGTTTCGTGTGAGGGCCTGGACCCGGGCGACGTGACCGCCATCCGCGCTGCCGGACTGCACATTGCGA
TCTACACCGAAAACAGCCCGGCGCGCGCCGCACCGTGGCTGGCGCTCGGCGTCGACACCGTGGTGACCGACCATCCCGAG
CGTTTCCTGGCCCCACCTTTCGTCCAATGA

Upstream 100 bases:

>100_bases
CGCATCCTCGACGAGGAACTCGCCGCGGTGTGGGCCGATCGCAAGCCGGCCAAGGAAGCGCTCGACACCGCCGTGGCGCG
CGCGTCCGGCATCTGACGCG

Downstream 100 bases:

>100_bases
CGCTCGCACTTCACGCCGCGGCACTTCGCCGTACGCCCTGCCGACACACCGGGCGGGCCTGCGCCGGCACCTTCACAATC
TTACTTTCGGAGTAGGGCTT

Product: cytoplasmic glycerophosphodiester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MTIGWPLPRVLAHRCGGRLAPENTLAGLNAAAALGCRGVEFDVMLSADGIPVLIHDETLERTTDGSGPVAETTYGALACL
DAGSRFCARFAGEPVPRLDAALARCAALGLAVNLELKPSTGCEAETGTVVGRALTANWATFAPHLVLSSFSERALVAAAD
AAPGFLRALLVERVPADWRDRCAALGAVALHVSCEGLDPGDVTAIRAAGLHIAIYTENSPARAAPWLALGVDTVVTDHPE
RFLAPPFVQ

Sequences:

>Translated_249_residues
MTIGWPLPRVLAHRCGGRLAPENTLAGLNAAAALGCRGVEFDVMLSADGIPVLIHDETLERTTDGSGPVAETTYGALACL
DAGSRFCARFAGEPVPRLDAALARCAALGLAVNLELKPSTGCEAETGTVVGRALTANWATFAPHLVLSSFSERALVAAAD
AAPGFLRALLVERVPADWRDRCAALGAVALHVSCEGLDPGDVTAIRAAGLHIAIYTENSPARAAPWLALGVDTVVTDHPE
RFLAPPFVQ
>Mature_248_residues
TIGWPLPRVLAHRCGGRLAPENTLAGLNAAAALGCRGVEFDVMLSADGIPVLIHDETLERTTDGSGPVAETTYGALACLD
AGSRFCARFAGEPVPRLDAALARCAALGLAVNLELKPSTGCEAETGTVVGRALTANWATFAPHLVLSSFSERALVAAADA
APGFLRALLVERVPADWRDRCAALGAVALHVSCEGLDPGDVTAIRAAGLHIAIYTENSPARAAPWLALGVDTVVTDHPER
FLAPPFVQ

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Homo sapiens, GI7706617, Length=109, Percent_Identity=42.2018348623853, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI284055245, Length=256, Percent_Identity=26.5625, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI284055240, Length=256, Percent_Identity=26.5625, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI21361649, Length=256, Percent_Identity=26.5625, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI284055242, Length=92, Percent_Identity=40.2173913043478, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI1789858, Length=234, Percent_Identity=44.8717948717949, Blast_Score=194, Evalue=4e-51,
Organism=Caenorhabditis elegans, GI17561436, Length=140, Percent_Identity=30.7142857142857, Blast_Score=75, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 25866; Mature: 25735

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS50007 PIPLC_X_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIGWPLPRVLAHRCGGRLAPENTLAGLNAAAALGCRGVEFDVMLSADGIPVLIHDETLE
CCCCCCHHHHHHHHCCCCCCCCHHHHCCCHHHHHCCCCCEEEEEEECCCEEEEEECCHHH
RTTDGSGPVAETTYGALACLDAGSRFCARFAGEPVPRLDAALARCAALGLAVNLELKPST
HCCCCCCCCCHHHHHHHEEHHCCHHHHHHHCCCCCCHHHHHHHHHHHHCEEEEEEECCCC
GCEAETGTVVGRALTANWATFAPHLVLSSFSERALVAAADAAPGFLRALLVERVPADWRD
CCCCCCCEEEEHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCHHH
RCAALGAVALHVSCEGLDPGDVTAIRAAGLHIAIYTENSPARAAPWLALGVDTVVTDHPE
HHHHHCEEEEEEEECCCCCCCEEEEEECCEEEEEEECCCCCCCCCEEEECCHHHCCCCCH
RFLAPPFVQ
HHCCCCCCC
>Mature Secondary Structure 
TIGWPLPRVLAHRCGGRLAPENTLAGLNAAAALGCRGVEFDVMLSADGIPVLIHDETLE
CCCCCHHHHHHHHCCCCCCCCHHHHCCCHHHHHCCCCCEEEEEEECCCEEEEEECCHHH
RTTDGSGPVAETTYGALACLDAGSRFCARFAGEPVPRLDAALARCAALGLAVNLELKPST
HCCCCCCCCCHHHHHHHEEHHCCHHHHHHHCCCCCCHHHHHHHHHHHHCEEEEEEECCCC
GCEAETGTVVGRALTANWATFAPHLVLSSFSERALVAAADAAPGFLRALLVERVPADWRD
CCCCCCCEEEEHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCHHH
RCAALGAVALHVSCEGLDPGDVTAIRAAGLHIAIYTENSPARAAPWLALGVDTVVTDHPE
HHHHHCEEEEEEEECCCCCCCEEEEEECCEEEEEEECCCCCCCCCEEEECCHHHCCCCCH
RFLAPPFVQ
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2541415; 1851953; 8041620; 9278503; 3062310 [H]