| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is 119897261
Identifier: 119897261
GI number: 119897261
Start: 1042491
End: 1043462
Strand: Direct
Name: 119897261
Synonym: azo0970
Alternate gene names: NA
Gene position: 1042491-1043462 (Clockwise)
Preceding gene: 119897260
Following gene: 119897262
Centisome position: 23.82
GC content: 67.49
Gene sequence:
>972_bases ATGTCGCTGATCAAGCCCGCCGCCCGCATGCTTGCCGCGCTGGCCTTGTGCCTGCCGTTCGCCACCCCGGTTGCCGCCCA GCAGAAGTCGGTCGCCGTGACCGCCATCGTGGAGCATCCGGCCCTCGATGCGGTGCGCGATGGGGTCAAGGACGCGCTCG CCAAGGCCGGCTACGAGGACGGCAAGAATCTCAGGTGGCAGTATCAAAGCGCCCAGGGCAACACCGGCACGGCGGCCCAG ATCGCGCGCAAGTTCGTCGGTGACCAGCCGGACGTCATCGTCGCGATCGCGACCCCGTCGGCGCAGGCGGTGGTGGCAGC GACCAAGCAGGTGCCGGTGGTCTATTCGGGCGTCACCGATCCGGTGGCCGCGCAGCTCGTGCCGGGCATGGGGCCCTCGG GCAGCAATGTCACCGGCGTGTCGGACATGCTGGCGCTGGACAAGCAGGTCGAGCTGATCCGTCGCGTGGTGCCCGCGGCC AAGCGCGTCGGCATGGTCTACAACCCGGGCGAGGCCAACTCGGTCGTGGTGGTGAAGGCGCTGCGGGAGCTGCTGCCCAA GCACGGCATGAGCCTGGTAGAGGCCGCCGCGCCGCGCTCGGTCGACGTCGGCTCTGCGGCGCGCAGCCTCACCGGCAAGG TCGACGTGATCTACACCAACACCGATAACAACGTGGTTTCGGCCTACGAGTCGCTCGTCAAGGTCGGCAACGACGCCAAG ATTCCGCTGGTTGCCGCTGACACCGACAGCGTCAAGCGTGGCGCGATCGCCGCGGTGGGGATCAACTACCGTGACCTCGG CGAGCAGACCGGGCGCATGGTCGTGCGCATCCTCAAAGGCGAACAGCCGGGCGCCATGGCGTCCGAGACCAGTTCCAAGC TCGAACTGTTCGTCAATCCCGCCGCGGCGAAGAAGCAGGGCGTGCAGTTGTCGGACGAACTGCTGAAGTCGGCCGCCAGA ATCATCGAATAA
Upstream 100 bases:
>100_bases CATCGCGTTCTGAGCGACAGGCGGCTCGGGTTACACTCGCGCCCTCGGCCGTAGCTCCACCCGTTTGCGGCCGCCATCAT TCCAACGAGGAGAGCGTCCC
Downstream 100 bases:
>100_bases GACCTTCCCGTTCGCGCTCCCGCTGCGCCGCACCGGCGCGCGGGAGGGGCGGATCATCCCTCCCGGTACTCCAAGATGTC GCTCTATACCCTGCTCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MSLIKPAARMLAALALCLPFATPVAAQQKSVAVTAIVEHPALDAVRDGVKDALAKAGYEDGKNLRWQYQSAQGNTGTAAQ IARKFVGDQPDVIVAIATPSAQAVVAATKQVPVVYSGVTDPVAAQLVPGMGPSGSNVTGVSDMLALDKQVELIRRVVPAA KRVGMVYNPGEANSVVVVKALRELLPKHGMSLVEAAAPRSVDVGSAARSLTGKVDVIYTNTDNNVVSAYESLVKVGNDAK IPLVAADTDSVKRGAIAAVGINYRDLGEQTGRMVVRILKGEQPGAMASETSSKLELFVNPAAAKKQGVQLSDELLKSAAR IIE
Sequences:
>Translated_323_residues MSLIKPAARMLAALALCLPFATPVAAQQKSVAVTAIVEHPALDAVRDGVKDALAKAGYEDGKNLRWQYQSAQGNTGTAAQ IARKFVGDQPDVIVAIATPSAQAVVAATKQVPVVYSGVTDPVAAQLVPGMGPSGSNVTGVSDMLALDKQVELIRRVVPAA KRVGMVYNPGEANSVVVVKALRELLPKHGMSLVEAAAPRSVDVGSAARSLTGKVDVIYTNTDNNVVSAYESLVKVGNDAK IPLVAADTDSVKRGAIAAVGINYRDLGEQTGRMVVRILKGEQPGAMASETSSKLELFVNPAAAKKQGVQLSDELLKSAAR IIE >Mature_322_residues SLIKPAARMLAALALCLPFATPVAAQQKSVAVTAIVEHPALDAVRDGVKDALAKAGYEDGKNLRWQYQSAQGNTGTAAQI ARKFVGDQPDVIVAIATPSAQAVVAATKQVPVVYSGVTDPVAAQLVPGMGPSGSNVTGVSDMLALDKQVELIRRVVPAAK RVGMVYNPGEANSVVVVKALRELLPKHGMSLVEAAAPRSVDVGSAARSLTGKVDVIYTNTDNNVVSAYESLVKVGNDAKI PLVAADTDSVKRGAIAAVGINYRDLGEQTGRMVVRILKGEQPGAMASETSSKLELFVNPAAAKKQGVQLSDELLKSAARI IE
Specific function: Unknown
COG id: COG2984
COG function: function code R; ABC-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007487 [H]
Pfam domain/function: PF04392 ABC_sub_bind [H]
EC number: NA
Molecular weight: Translated: 33598; Mature: 33467
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLIKPAARMLAALALCLPFATPVAAQQKSVAVTAIVEHPALDAVRDGVKDALAKAGYED CCCCHHHHHHHHHHHHHHHHCCCCHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCC GKNLRWQYQSAQGNTGTAAQIARKFVGDQPDVIVAIATPSAQAVVAATKQVPVVYSGVTD CCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCEEEEHHCCCCEEECCCCC PVAAQLVPGMGPSGSNVTGVSDMLALDKQVELIRRVVPAAKRVGMVYNPGEANSVVVVKA HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHH LRELLPKHGMSLVEAAAPRSVDVGSAARSLTGKVDVIYTNTDNNVVSAYESLVKVGNDAK HHHHHHHCCHHHHHHCCCCCCCCCHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCC IPLVAADTDSVKRGAIAAVGINYRDLGEQTGRMVVRILKGEQPGAMASETSSKLELFVNP EEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCEEEEECC AAAKKQGVQLSDELLKSAARIIE HHHHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SLIKPAARMLAALALCLPFATPVAAQQKSVAVTAIVEHPALDAVRDGVKDALAKAGYED CCCHHHHHHHHHHHHHHHHCCCCHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCC GKNLRWQYQSAQGNTGTAAQIARKFVGDQPDVIVAIATPSAQAVVAATKQVPVVYSGVTD CCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCEEEEHHCCCCEEECCCCC PVAAQLVPGMGPSGSNVTGVSDMLALDKQVELIRRVVPAAKRVGMVYNPGEANSVVVVKA HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHH LRELLPKHGMSLVEAAAPRSVDVGSAARSLTGKVDVIYTNTDNNVVSAYESLVKVGNDAK HHHHHHHCCHHHHHHCCCCCCCCCHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCC IPLVAADTDSVKRGAIAAVGINYRDLGEQTGRMVVRILKGEQPGAMASETSSKLELFVNP EEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCEEEEECC AAAKKQGVQLSDELLKSAARIIE HHHHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]