| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is 119897262
Identifier: 119897262
GI number: 119897262
Start: 1043538
End: 1044428
Strand: Direct
Name: 119897262
Synonym: azo0971
Alternate gene names: NA
Gene position: 1043538-1044428 (Clockwise)
Preceding gene: 119897261
Following gene: 119897263
Centisome position: 23.85
GC content: 67.12
Gene sequence:
>891_bases ATGTCGCTCTATACCCTGCTCGGCGCGTTCGAGATCGGGCTGATTTTCAGCCTGGTTGCGCTGGGCGTTTTCATCTCTTT CCGCCTGCTGCGTTTTCCGGACCTCACCGTAGACGGCAGCTTTCCACTCGGCGGCGCGGTGGCTGCCACGCTGATCGCGT CCGGCCACGATCCCTTCGTTGCCACTGCGGCCGCGGCGCTCGCCGGGGCCCTCGCGGGTCTGCTGACGGGCTGGCTGAAC GTGCGCCTGAAGATCATGGACCTGCTGGCCAGCATCCTGGTGATGATCGCGCTGTACTCGATCAATCTGCGGGTGATGGG GCGGCCCAACGTGCCTTTGATCACCGAGCCGACCGTGTTTGCGCTGCTGCAGCCGGAGTCGCTTGCCGACTATGTGTTCC GGCCGCTGTTGCTGGTGGGCGTGGTGGTGGTGGCCAAGCTCGGGCTCGACTGGTTCTTCACCACCGAACTCGGACTGGCG ATGCGCGCCACCGGCTCCAATCCGCGCATGGCGCGCGCCCAGGGGGCGAATACCGGACGCATGCTGCTGGGCGGCATGGC CTTGTCGAATGCGCTGGTCGGGCTTGCCGGTGCGCTGTTCGCGCAGACCCAGGGCGGGGCGGACATCTCGATGGGGGTCG GCACGATCGTGATCGGGCTGGCCGCGGTGATCGTCGGCGAAAGCATCCTGCCTTCGCGCAAGCTGGTTCTCGCCACGCTG GCGGTGATCGCCGGCGCCATCGTCTACCGCTTCTTCATCGCGCTGGCGCTCAACAGCGACTTCATCGGCCTGCAGGCGCA GGACCTCAACCTGGTGACCGCGGCGCTGGTCACCGTGGCGCTGGTGTTGCCGATGGCCAAGCGCCGCCTGCCCGGCCGCA AGGGGAACTGA
Upstream 100 bases:
>100_bases GTCGGCCGCCAGAATCATCGAATAAGACCTTCCCGTTCGCGCTCCCGCTGCGCCGCACCGGCGCGCGGGAGGGGCGGATC ATCCCTCCCGGTACTCCAAG
Downstream 100 bases:
>100_bases GATGCTGCGCGCACAGGATCTTCACATGACCTTCAACGCCGGCACGCCGATCGAAACGCGTGCGCTGCGTGGCTTGTCGC TCGAGATTCCGAGCGGCCAG
Product: ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MSLYTLLGAFEIGLIFSLVALGVFISFRLLRFPDLTVDGSFPLGGAVAATLIASGHDPFVATAAAALAGALAGLLTGWLN VRLKIMDLLASILVMIALYSINLRVMGRPNVPLITEPTVFALLQPESLADYVFRPLLLVGVVVVAKLGLDWFFTTELGLA MRATGSNPRMARAQGANTGRMLLGGMALSNALVGLAGALFAQTQGGADISMGVGTIVIGLAAVIVGESILPSRKLVLATL AVIAGAIVYRFFIALALNSDFIGLQAQDLNLVTAALVTVALVLPMAKRRLPGRKGN
Sequences:
>Translated_296_residues MSLYTLLGAFEIGLIFSLVALGVFISFRLLRFPDLTVDGSFPLGGAVAATLIASGHDPFVATAAAALAGALAGLLTGWLN VRLKIMDLLASILVMIALYSINLRVMGRPNVPLITEPTVFALLQPESLADYVFRPLLLVGVVVVAKLGLDWFFTTELGLA MRATGSNPRMARAQGANTGRMLLGGMALSNALVGLAGALFAQTQGGADISMGVGTIVIGLAAVIVGESILPSRKLVLATL AVIAGAIVYRFFIALALNSDFIGLQAQDLNLVTAALVTVALVLPMAKRRLPGRKGN >Mature_295_residues SLYTLLGAFEIGLIFSLVALGVFISFRLLRFPDLTVDGSFPLGGAVAATLIASGHDPFVATAAAALAGALAGLLTGWLNV RLKIMDLLASILVMIALYSINLRVMGRPNVPLITEPTVFALLQPESLADYVFRPLLLVGVVVVAKLGLDWFFTTELGLAM RATGSNPRMARAQGANTGRMLLGGMALSNALVGLAGALFAQTQGGADISMGVGTIVIGLAAVIVGESILPSRKLVLATLA VIAGAIVYRFFIALALNSDFIGLQAQDLNLVTAALVTVALVLPMAKRRLPGRKGN
Specific function: Unknown
COG id: COG4120
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 30798; Mature: 30667
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLYTLLGAFEIGLIFSLVALGVFISFRLLRFPDLTVDGSFPLGGAVAATLIASGHDPFV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHCCCCCHH ATAAAALAGALAGLLTGWLNVRLKIMDLLASILVMIALYSINLRVMGRPNVPLITEPTVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEECCCEE ALLQPESLADYVFRPLLLVGVVVVAKLGLDWFFTTELGLAMRATGSNPRMARAQGANTGR EEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCEEEEECCCCCCCHHHCCCCCCH MLLGGMALSNALVGLAGALFAQTQGGADISMGVGTIVIGLAAVIVGESILPSRKLVLATL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH AVIAGAIVYRFFIALALNSDFIGLQAQDLNLVTAALVTVALVLPMAKRRLPGRKGN HHHHHHHHHHHHHHHHHCCCEECEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SLYTLLGAFEIGLIFSLVALGVFISFRLLRFPDLTVDGSFPLGGAVAATLIASGHDPFV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHCCCCCHH ATAAAALAGALAGLLTGWLNVRLKIMDLLASILVMIALYSINLRVMGRPNVPLITEPTVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEECCCEE ALLQPESLADYVFRPLLLVGVVVVAKLGLDWFFTTELGLAMRATGSNPRMARAQGANTGR EEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCEEEEECCCCCCCHHHCCCCCCH MLLGGMALSNALVGLAGALFAQTQGGADISMGVGTIVIGLAAVIVGESILPSRKLVLATL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH AVIAGAIVYRFFIALALNSDFIGLQAQDLNLVTAALVTVALVLPMAKRRLPGRKGN HHHHHHHHHHHHHHHHHCCCEECEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]