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The map label for this gene is ytfM [H]

Identifier: 119897260

GI number: 119897260

Start: 1040676

End: 1042403

Strand: Direct

Name: ytfM [H]

Synonym: azo0969

Alternate gene names: 119897260

Gene position: 1040676-1042403 (Clockwise)

Preceding gene: 119897259

Following gene: 119897261

Centisome position: 23.78

GC content: 70.66

Gene sequence:

>1728_bases
GTGCGCTGCAGCCTGCGCCTCGCCACAGCGGTCGTGCTGCTGTGTGCTGCGGGTGTGGCGGGCGCGCAGTCGCCGCTGGA
GATCGAACTCGACGTTCCCGACCGCCTGCGCCCGCTGCTCGAACAGCATGTGCGGGCACTGCGCGATGACGCGCTGCGGC
CCGAGGACCCGGCCGATCGTCGGGCGCTGGTACGCCGCACGCGCAAGGAAGTGGCCGACCTGCTGGCCACCGAAGGCTAT
TTTTCCCCCGAGATCACGCTGGACCGCGGGGAACGCTGGCGCTTGAGCGTCGATCCCGGCCCGCGAACCACCGTGGCTGC
GGTCGAACTTGGCTTCGAAGGCGAACTCGGCGACGACCCGGCGATGGCCGGACGTGTCGAGGAGTTGCGCAGGGCGTGGA
GCCTGCAGGTGGGCGAGCCGTTCCGGCAGGCGGACTGGGACGACGCCAAGCGCAGCCTGATCGATGAGGTGAGCCGGCGC
CGCTACGCGGCGGCGCGCATCACCGCGAGCCGTGCCGAAGTCGATCCGGAGAACGCCGCGGTGGGGCTCGCCGTCACTGT
CGATAGCGGCCCTGCCTTTCGTCTGGGCGAGCTCGACGTGCGCGGCCTGGAGCATCTTCCGGCCGACCTGGTCGCGCGCT
ACAGCACCTTGCAGGCGGGCGATTTCTACGACCGCGACCTGCTGCTGGCCTTCCAGACGTCCTTGCAGAACGCGCCGTAT
TTCGCCTCGGTGGTGGTGGACGTCGAGGCAGATCCTGCGCGCGCCGCCGCGGTGCCGGTGCGAGTGCAGGTCAGCGAGGC
GCTGCCGCGGCGGGTGGGGTTCGGCGTGGGCTTTTCCAGCAACACCGGCTACCGCGTCGAAGGCAGCTTTCGCGACGCCA
ACCTTTTTGGCCGCGCGTGGGAGCTGGTGTCCGGGCTGCGGCTCGAGCAGCGGCGCCAGTCCGCCTATGCGGACGTCTTT
CTGCCGCCGCGCGACGTGCGTCATCGCGACAGCGTGGGCGCGCTGATGGAACGCAGCGACCTCGAGGGCCTGCGCCTGTC
CACCCAGGCGGTTGGCGTGGCCCGGAGCACGGTGCGGGGTGATATCGAAACGCGTATCGCACTGCGCTACCAGCAGGAGG
AACTGCGGCCCGACGGCGCGAAAGCGACCGAGCACGACACCCTTACCGCCAACTGGACCTGGACGCGCCGCGCGGTCGAC
AACCTGCTCGACCCGCGCCGCGGTTTCGTGCTGGAGTTCCAGGTCGGGGGCGGCAGCAGCATCGCGCTCGCCGAGCAGGA
TTTCGTCCGGCTCTACAGCCGCTTCGTGCGCTACCAGCCGGTCGGCGACACCGACAACCTCATCCTGCGCCTCGAAGGAG
GCGTCACCCTCGCGCCCTCGCGCCAGGGTATCCCGCAGGACTTCCTGTTCCGTACTGGCGGCGCGCAGACGGTGCGCGGC
TACGCCTACCAGAGCCTGGGCGTGCGGGAGGGCGACGCGGTGGTCGGCGGCCGCTATCTGGGCGTGGCCAGCGCCGAGTA
CGTGCATTGGTTCAGGCCGCAGTGGGGGAGCGCCTTTTTCGTCGATGCGGGCGATGCGGCCGATGATCGGCGCGGCTTCG
ACCCCAAGGTCGGCTACGGGGTGGGGGCGCGCTGGCGCAGCCCCGCGGGGCCGCTTGCGGCCGATCTCGCATGGTCGCAG
GAGGAGCGGCGTCTCCGCCTGCATTTCGGTGTCGCCATCGCGTTCTGA

Upstream 100 bases:

>100_bases
TGCCGACCAAGCTTCACCAGCGTGTGCCGGTGATCCTCGGTTCGCGCAACGAGGTCGAGCGTGTGACCGCCTATCACCGC
GAGTCCTGACGGGGCCGGCG

Downstream 100 bases:

>100_bases
GCGACAGGCGGCTCGGGTTACACTCGCGCCCTCGGCCGTAGCTCCACCCGTTTGCGGCCGCCATCATTCCAACGAGGAGA
GCGTCCCATGTCGCTGATCA

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 575; Mature: 575

Protein sequence:

>575_residues
MRCSLRLATAVVLLCAAGVAGAQSPLEIELDVPDRLRPLLEQHVRALRDDALRPEDPADRRALVRRTRKEVADLLATEGY
FSPEITLDRGERWRLSVDPGPRTTVAAVELGFEGELGDDPAMAGRVEELRRAWSLQVGEPFRQADWDDAKRSLIDEVSRR
RYAAARITASRAEVDPENAAVGLAVTVDSGPAFRLGELDVRGLEHLPADLVARYSTLQAGDFYDRDLLLAFQTSLQNAPY
FASVVVDVEADPARAAAVPVRVQVSEALPRRVGFGVGFSSNTGYRVEGSFRDANLFGRAWELVSGLRLEQRRQSAYADVF
LPPRDVRHRDSVGALMERSDLEGLRLSTQAVGVARSTVRGDIETRIALRYQQEELRPDGAKATEHDTLTANWTWTRRAVD
NLLDPRRGFVLEFQVGGGSSIALAEQDFVRLYSRFVRYQPVGDTDNLILRLEGGVTLAPSRQGIPQDFLFRTGGAQTVRG
YAYQSLGVREGDAVVGGRYLGVASAEYVHWFRPQWGSAFFVDAGDAADDRRGFDPKVGYGVGARWRSPAGPLAADLAWSQ
EERRLRLHFGVAIAF

Sequences:

>Translated_575_residues
MRCSLRLATAVVLLCAAGVAGAQSPLEIELDVPDRLRPLLEQHVRALRDDALRPEDPADRRALVRRTRKEVADLLATEGY
FSPEITLDRGERWRLSVDPGPRTTVAAVELGFEGELGDDPAMAGRVEELRRAWSLQVGEPFRQADWDDAKRSLIDEVSRR
RYAAARITASRAEVDPENAAVGLAVTVDSGPAFRLGELDVRGLEHLPADLVARYSTLQAGDFYDRDLLLAFQTSLQNAPY
FASVVVDVEADPARAAAVPVRVQVSEALPRRVGFGVGFSSNTGYRVEGSFRDANLFGRAWELVSGLRLEQRRQSAYADVF
LPPRDVRHRDSVGALMERSDLEGLRLSTQAVGVARSTVRGDIETRIALRYQQEELRPDGAKATEHDTLTANWTWTRRAVD
NLLDPRRGFVLEFQVGGGSSIALAEQDFVRLYSRFVRYQPVGDTDNLILRLEGGVTLAPSRQGIPQDFLFRTGGAQTVRG
YAYQSLGVREGDAVVGGRYLGVASAEYVHWFRPQWGSAFFVDAGDAADDRRGFDPKVGYGVGARWRSPAGPLAADLAWSQ
EERRLRLHFGVAIAF
>Mature_575_residues
MRCSLRLATAVVLLCAAGVAGAQSPLEIELDVPDRLRPLLEQHVRALRDDALRPEDPADRRALVRRTRKEVADLLATEGY
FSPEITLDRGERWRLSVDPGPRTTVAAVELGFEGELGDDPAMAGRVEELRRAWSLQVGEPFRQADWDDAKRSLIDEVSRR
RYAAARITASRAEVDPENAAVGLAVTVDSGPAFRLGELDVRGLEHLPADLVARYSTLQAGDFYDRDLLLAFQTSLQNAPY
FASVVVDVEADPARAAAVPVRVQVSEALPRRVGFGVGFSSNTGYRVEGSFRDANLFGRAWELVSGLRLEQRRQSAYADVF
LPPRDVRHRDSVGALMERSDLEGLRLSTQAVGVARSTVRGDIETRIALRYQQEELRPDGAKATEHDTLTANWTWTRRAVD
NLLDPRRGFVLEFQVGGGSSIALAEQDFVRLYSRFVRYQPVGDTDNLILRLEGGVTLAPSRQGIPQDFLFRTGGAQTVRG
YAYQSLGVREGDAVVGGRYLGVASAEYVHWFRPQWGSAFFVDAGDAADDRRGFDPKVGYGVGARWRSPAGPLAADLAWSQ
EERRLRLHFGVAIAF

Specific function: Unknown

COG id: COG0729

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0698 [H]

Homologues:

Organism=Escherichia coli, GI1790666, Length=588, Percent_Identity=23.9795918367347, Blast_Score=112, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 63547; Mature: 63547

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCSLRLATAVVLLCAAGVAGAQSPLEIELDVPDRLRPLLEQHVRALRDDALRPEDPADR
CCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHH
RALVRRTRKEVADLLATEGYFSPEITLDRGERWRLSVDPGPRTTVAAVELGFEGELGDDP
HHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEEECCCCCCEEEEEEECCCCCCCCCC
AMAGRVEELRRAWSLQVGEPFRQADWDDAKRSLIDEVSRRRYAAARITASRAEVDPENAA
HHHHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHEEHHHCCCCCCCCE
VGLAVTVDSGPAFRLGELDVRGLEHLPADLVARYSTLQAGDFYDRDLLLAFQTSLQNAPY
EEEEEEECCCCCEEECCCCCCCHHCCCHHHHHHHHHCCCCCCCCCHHHEEEHHHHCCCCE
FASVVVDVEADPARAAAVPVRVQVSEALPRRVGFGVGFSSNTGYRVEGSFRDANLFGRAW
EEEEEEEECCCCCCCEEEEEEEEHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHH
ELVSGLRLEQRRQSAYADVFLPPRDVRHRDSVGALMERSDLEGLRLSTQAVGVARSTVRG
HHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHC
DIETRIALRYQQEELRPDGAKATEHDTLTANWTWTRRAVDNLLDPRRGFVLEFQVGGGSS
CCCEEEEEEEEHHHCCCCCCCCCCCCEEEEECEEHHHHHHHHCCCCCCEEEEEEECCCCE
IALAEQDFVRLYSRFVRYQPVGDTDNLILRLEGGVTLAPSRQGIPQDFLFRTGGAQTVRG
EEECHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEECCCCCCCCHHHHEECCCCCHHHH
YAYQSLGVREGDAVVGGRYLGVASAEYVHWFRPQWGSAFFVDAGDAADDRRGFDPKVGYG
HHHHHCCCCCCCEEECCEEEECCCCCHHEEECCCCCCEEEEECCCCCCCCCCCCCCCCCC
VGARWRSPAGPLAADLAWSQEERRLRLHFGVAIAF
CCCCCCCCCCCCHHHHCCCCCCCEEEEEEEEEEEC
>Mature Secondary Structure
MRCSLRLATAVVLLCAAGVAGAQSPLEIELDVPDRLRPLLEQHVRALRDDALRPEDPADR
CCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHH
RALVRRTRKEVADLLATEGYFSPEITLDRGERWRLSVDPGPRTTVAAVELGFEGELGDDP
HHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEEECCCCCCEEEEEEECCCCCCCCCC
AMAGRVEELRRAWSLQVGEPFRQADWDDAKRSLIDEVSRRRYAAARITASRAEVDPENAA
HHHHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHEEHHHCCCCCCCCE
VGLAVTVDSGPAFRLGELDVRGLEHLPADLVARYSTLQAGDFYDRDLLLAFQTSLQNAPY
EEEEEEECCCCCEEECCCCCCCHHCCCHHHHHHHHHCCCCCCCCCHHHEEEHHHHCCCCE
FASVVVDVEADPARAAAVPVRVQVSEALPRRVGFGVGFSSNTGYRVEGSFRDANLFGRAW
EEEEEEEECCCCCCCEEEEEEEEHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHH
ELVSGLRLEQRRQSAYADVFLPPRDVRHRDSVGALMERSDLEGLRLSTQAVGVARSTVRG
HHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHC
DIETRIALRYQQEELRPDGAKATEHDTLTANWTWTRRAVDNLLDPRRGFVLEFQVGGGSS
CCCEEEEEEEEHHHCCCCCCCCCCCCEEEEECEEHHHHHHHHCCCCCCEEEEEEECCCCE
IALAEQDFVRLYSRFVRYQPVGDTDNLILRLEGGVTLAPSRQGIPQDFLFRTGGAQTVRG
EEECHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEECCCCCCCCHHHHEECCCCCHHHH
YAYQSLGVREGDAVVGGRYLGVASAEYVHWFRPQWGSAFFVDAGDAADDRRGFDPKVGYG
HHHHHCCCCCCCEEECCEEEECCCCCHHEEECCCCCCEEEEECCCCCCCCCCCCCCCCCC
VGARWRSPAGPLAADLAWSQEERRLRLHFGVAIAF
CCCCCCCCCCCCHHHHCCCCCCCEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]