| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is gmhB [H]
Identifier: 119897078
GI number: 119897078
Start: 846144
End: 846677
Strand: Direct
Name: gmhB [H]
Synonym: azo0787
Alternate gene names: 119897078
Gene position: 846144-846677 (Clockwise)
Preceding gene: 119897077
Following gene: 119897079
Centisome position: 19.34
GC content: 66.1
Gene sequence:
>534_bases GTGAAGCTCATCATTCTCGACCGCGACGGCGTCATCAACTACGACTCCGACCAGTTCATCAAGTCGCCGGAAGAGTGGAA GCCGATTCCCGGCTCGCTCGAGGCGATCGCCAAGCTCAACCAATGGGGTTGGCGCGTCGTGGTGGCGTCCAACCAGTCGG GCGTCGGCCGCGGCCTGTTCGGCATGGATACGCTAAACGCGATCAATGAAAAGATGGTGAAGAGCCTCGCGCAGGTCGGC GGGCGGCTCGACGCGATCTTCTTCTGTCCGCACGCGGCGGACTCCACCTGTGAATGCCGCAAGCCCAAGCCGGGCCTGTT CCTGCAGATCGCCGCGCGCTTCAACGCCGATCTGGCAGGGGTGCCCTGTGTGGGCGACAGCCTGCGCGACCTGCAGGCCG GCGCCGCGGTCGGCTGTCAGCCCTATCTCGTGCTGACCGGCAAGGGACTCAAGACCCGCGAGGATCCCGCGCTGCCCGAC AACGCCCTCATCTACCCCGACCTCGCCTCCGTGGTCGCCGACCTCACCGCCTGA
Upstream 100 bases:
>100_bases CTGGCCGGCCTGATGAACCAGGTCGCCGACATTTCCCGCCTGTCGGCCTGACCGCCACGGCCCGGCGACCGCCGGGCCGG CCTTCCCGTCCGGAGCCCCT
Downstream 100 bases:
>100_bases AGGACCTCGATCTCAACGTGATTCTGCTGCGTTCCCTGTTGTTCGCCATCGTGCTCGCGGTGGTCACCCCGCCGTACGCC ATTCTCGGGATGCTGATGTT
Product: D,D-heptose 1,7-bisphosphate phosphatase
Products: NA
Alternate protein names: D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [H]
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MKLIILDRDGVINYDSDQFIKSPEEWKPIPGSLEAIAKLNQWGWRVVVASNQSGVGRGLFGMDTLNAINEKMVKSLAQVG GRLDAIFFCPHAADSTCECRKPKPGLFLQIAARFNADLAGVPCVGDSLRDLQAGAAVGCQPYLVLTGKGLKTREDPALPD NALIYPDLASVVADLTA
Sequences:
>Translated_177_residues MKLIILDRDGVINYDSDQFIKSPEEWKPIPGSLEAIAKLNQWGWRVVVASNQSGVGRGLFGMDTLNAINEKMVKSLAQVG GRLDAIFFCPHAADSTCECRKPKPGLFLQIAARFNADLAGVPCVGDSLRDLQAGAAVGCQPYLVLTGKGLKTREDPALPD NALIYPDLASVVADLTA >Mature_177_residues MKLIILDRDGVINYDSDQFIKSPEEWKPIPGSLEAIAKLNQWGWRVVVASNQSGVGRGLFGMDTLNAINEKMVKSLAQVG GRLDAIFFCPHAADSTCECRKPKPGLFLQIAARFNADLAGVPCVGDSLRDLQAGAAVGCQPYLVLTGKGLKTREDPALPD NALIYPDLASVVADLTA
Specific function: Converts the D-glycero-beta-D-manno-heptose 1,7- bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1- phosphate by removing the phosphate group at the C-7 position [H]
COG id: COG0241
COG function: function code E; Histidinol phosphatase and related phosphatases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gmhB family [H]
Homologues:
Organism=Escherichia coli, GI1786399, Length=154, Percent_Identity=38.3116883116883, Blast_Score=100, Evalue=7e-23, Organism=Escherichia coli, GI87082027, Length=143, Percent_Identity=28.6713286713287, Blast_Score=70, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006549 - InterPro: IPR006543 - InterPro: IPR013954 [H]
Pfam domain/function: PF08645 PNK3P [H]
EC number: NA
Molecular weight: Translated: 18984; Mature: 18984
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLIILDRDGVINYDSDQFIKSPEEWKPIPGSLEAIAKLNQWGWRVVVASNQSGVGRGLF CEEEEECCCCEEECCCHHHHCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCC GMDTLNAINEKMVKSLAQVGGRLDAIFFCPHAADSTCECRKPKPGLFLQIAARFNADLAG CHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCC VPCVGDSLRDLQAGAAVGCQPYLVLTGKGLKTREDPALPDNALIYPDLASVVADLTA CCCCCCHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEECCCHHHHHHHHCC >Mature Secondary Structure MKLIILDRDGVINYDSDQFIKSPEEWKPIPGSLEAIAKLNQWGWRVVVASNQSGVGRGLF CEEEEECCCCEEECCCHHHHCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCC GMDTLNAINEKMVKSLAQVGGRLDAIFFCPHAADSTCECRKPKPGLFLQIAARFNADLAG CHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCC VPCVGDSLRDLQAGAAVGCQPYLVLTGKGLKTREDPALPDNALIYPDLASVVADLTA CCCCCCHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEECCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043; 12101286 [H]