| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is arnT [H]
Identifier: 119897037
GI number: 119897037
Start: 796481
End: 798106
Strand: Direct
Name: arnT [H]
Synonym: azo0746
Alternate gene names: 119897037
Gene position: 796481-798106 (Clockwise)
Preceding gene: 119897034
Following gene: 119897038
Centisome position: 18.2
GC content: 68.2
Gene sequence:
>1626_bases GTGCGACTCGATTCCCGATCCGTTCTTGCCTGCTACCTGCTGCTCGCCGTCGCCTACGTCGGCGGTCTGATGGTGCCGCT GATGAACAACGACTCCGCGCACCACGCGGGGATTGCGCTCCACATGCACCTGAGCGGCGACTATCTCAGCCTGGTGACTC AGGGCGAGAACTACCTCGACAAGCCTCACCTGCTGTTCTGGCTGGCAGCGCTCGGCTTCAAGGTGTTCGGCGTCAATACC TTCGCCTACAAGCTGCCTTCGCTGCTGTTTTCGGTGCTGGCGGTGTATTCGACCGCGCGCCTGGCCGCGCTGTTGTATTC CCCCGCGGCCGGACGCCTGGCAGGCCTGGTGCTGGCCAGCGCGCTCGCTTTCGTCCTGGCCAACAACGACGTCCGCATGG ACGCGCTGCTGACCGGTGCGATCGCGTTCTCGATCTGGCAACTCGCGGAATTCGTCGCCTGCCCTCGCTGGCGCAATCTG GCGCTCGCGGCGCTCGGCCTCGCGCTCGGCTTTTCCACCAAGGGCATGATCGGCGTGGCGATGCCCTTGATCGCGGTCTT CCTGCACCTGCTCTATCGGCGCGACTGGCAGCGTCTGTTCGACCCGCGCTGGCTGGTGCTGGGCGTGCTGACCCTGCTGC CGGCGTCGCCGGTGCTCTACGCCTATCACCACCAGTTCGGTGCCGACGGGGTGCGCTTCATCCTGTGGTCGCAGAACTTC GAGCGTCTGGCGGGCGAGCGTTTCGGCAACGCCGGCGCGCAGGATCCGCTGTTCTTCGTCCACACCTTCCTGTGGGCCTT CCTGCCGTGGTCCCTGCTCGCGCTCGCGGCGCTGTGGGCGCACGGGCGGCGGGTGGTGGCCGCGCGGCTGCGGCCGCAGG CGGGGGGCGAGCTGATCACGCTCGGCACGCTGGTGGTGCTGTTCGCGATCATTTCGGCGTCGCGCTTCAAGCTGCCGCAC TATCTCAACATCCTGCTGCCCTTGTTCGCCGTGCAACTCGCGGGCTGGCTGGCGCCGCGGCTTGACGCCGAGGCCGGCCG CGGGCTACGCCTCGCACAGTGGGTGGCCGCGGCGCTGCTGGTGGCGATCGCACTGGCGTTGAATGGGTGGGTCTTCCCGC TGACGTCGCCAGTCGTCGCACTCGGCGCCGCGGCAATCGCGACGGCGGGCGCGGTGCTGACGTTCCGGCGCCGTGGCGTT GCCCGGGTCGTGGTGGCGACGGTGGCGGTCGCCGCGGTGTTCAATTTCCTGCTCAACTTCAACTTCTACCCGCGCCTGCT GGGCTACCAAGCGGGAAACCAGCTGGCTGCCGCGGCGCACGAGCTGGCGCTTCCGGTCGATCAGATCGCCTACCTGGATG GCTACGGCCGCGCCAACAGCTTCGATTTCTACACCGCGCGGCTGACGCCGTCGGTGCCACTTGCGCAGCTGCAGCGCGGT GAGGGCCCGCGCTATCTCTACACCTCGGCGGGCGGGCGCGACGCCCTGACCGCCGCCGGGGTGCGGTATGACGTGCTGGC GAGCAACCCCGATTTCCGCATCACCCGCCTCAACGCGCAGTTCCTCGATCCCGCCCGCCGGCCCAAGACCTTGACCGAAC ATGTGCTGTTGAAGGTGGGCGAATGA
Upstream 100 bases:
>100_bases GCCGCCTGCCCGGCTGCGCGCCGGTCCGCCCTCGCGGCGCACTCATCGAGGGCGCGGCGGCCCTCCCTTCACCCTGTTTT CTTCTGCCAGACGCCGCGCC
Downstream 100 bases:
>100_bases GCACCGATACCTCTGCCCGCGCAGCGGAGTCGCGCGCTGCCCTCAGGGAGGTTCAATGATCAGCGTTCGCCGCTTCGGCT TCATCGCGATTGCAGCGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Undecaprenyl phosphate-alpha-L-Ara4N transferase [H]
Number of amino acids: Translated: 541; Mature: 541
Protein sequence:
>541_residues MRLDSRSVLACYLLLAVAYVGGLMVPLMNNDSAHHAGIALHMHLSGDYLSLVTQGENYLDKPHLLFWLAALGFKVFGVNT FAYKLPSLLFSVLAVYSTARLAALLYSPAAGRLAGLVLASALAFVLANNDVRMDALLTGAIAFSIWQLAEFVACPRWRNL ALAALGLALGFSTKGMIGVAMPLIAVFLHLLYRRDWQRLFDPRWLVLGVLTLLPASPVLYAYHHQFGADGVRFILWSQNF ERLAGERFGNAGAQDPLFFVHTFLWAFLPWSLLALAALWAHGRRVVAARLRPQAGGELITLGTLVVLFAIISASRFKLPH YLNILLPLFAVQLAGWLAPRLDAEAGRGLRLAQWVAAALLVAIALALNGWVFPLTSPVVALGAAAIATAGAVLTFRRRGV ARVVVATVAVAAVFNFLLNFNFYPRLLGYQAGNQLAAAAHELALPVDQIAYLDGYGRANSFDFYTARLTPSVPLAQLQRG EGPRYLYTSAGGRDALTAAGVRYDVLASNPDFRITRLNAQFLDPARRPKTLTEHVLLKVGE
Sequences:
>Translated_541_residues MRLDSRSVLACYLLLAVAYVGGLMVPLMNNDSAHHAGIALHMHLSGDYLSLVTQGENYLDKPHLLFWLAALGFKVFGVNT FAYKLPSLLFSVLAVYSTARLAALLYSPAAGRLAGLVLASALAFVLANNDVRMDALLTGAIAFSIWQLAEFVACPRWRNL ALAALGLALGFSTKGMIGVAMPLIAVFLHLLYRRDWQRLFDPRWLVLGVLTLLPASPVLYAYHHQFGADGVRFILWSQNF ERLAGERFGNAGAQDPLFFVHTFLWAFLPWSLLALAALWAHGRRVVAARLRPQAGGELITLGTLVVLFAIISASRFKLPH YLNILLPLFAVQLAGWLAPRLDAEAGRGLRLAQWVAAALLVAIALALNGWVFPLTSPVVALGAAAIATAGAVLTFRRRGV ARVVVATVAVAAVFNFLLNFNFYPRLLGYQAGNQLAAAAHELALPVDQIAYLDGYGRANSFDFYTARLTPSVPLAQLQRG EGPRYLYTSAGGRDALTAAGVRYDVLASNPDFRITRLNAQFLDPARRPKTLTEHVLLKVGE >Mature_541_residues MRLDSRSVLACYLLLAVAYVGGLMVPLMNNDSAHHAGIALHMHLSGDYLSLVTQGENYLDKPHLLFWLAALGFKVFGVNT FAYKLPSLLFSVLAVYSTARLAALLYSPAAGRLAGLVLASALAFVLANNDVRMDALLTGAIAFSIWQLAEFVACPRWRNL ALAALGLALGFSTKGMIGVAMPLIAVFLHLLYRRDWQRLFDPRWLVLGVLTLLPASPVLYAYHHQFGADGVRFILWSQNF ERLAGERFGNAGAQDPLFFVHTFLWAFLPWSLLALAALWAHGRRVVAARLRPQAGGELITLGTLVVLFAIISASRFKLPH YLNILLPLFAVQLAGWLAPRLDAEAGRGLRLAQWVAAALLVAIALALNGWVFPLTSPVVALGAAAIATAGAVLTFRRRGV ARVVVATVAVAAVFNFLLNFNFYPRLLGYQAGNQLAAAAHELALPVDQIAYLDGYGRANSFDFYTARLTPSVPLAQLQRG EGPRYLYTSAGGRDALTAAGVRYDVLASNPDFRITRLNAQFLDPARRPKTLTEHVLLKVGE
Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 83 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022839 - InterPro: IPR003342 [H]
Pfam domain/function: PF02366 PMT [H]
EC number: =2.4.2.43 [H]
Molecular weight: Translated: 58868; Mature: 58868
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLDSRSVLACYLLLAVAYVGGLMVPLMNNDSAHHAGIALHMHLSGDYLSLVTQGENYLD CCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEEEECCCEEEEEECCCCCCC KPHLLFWLAALGFKVFGVNTFAYKLPSLLFSVLAVYSTARLAALLYSPAAGRLAGLVLAS CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH ALAFVLANNDVRMDALLTGAIAFSIWQLAEFVACPRWRNLALAALGLALGFSTKGMIGVA HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHH MPLIAVFLHLLYRRDWQRLFDPRWLVLGVLTLLPASPVLYAYHHQFGADGVRFILWSQNF HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEECCCH ERLAGERFGNAGAQDPLFFVHTFLWAFLPWSLLALAALWAHGRRVVAARLRPQAGGELIT HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEH LGTLVVLFAIISASRFKLPHYLNILLPLFAVQLAGWLAPRLDAEAGRGLRLAQWVAAALL HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH VAIALALNGWVFPLTSPVVALGAAAIATAGAVLTFRRRGVARVVVATVAVAAVFNFLLNF HHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC NFYPRLLGYQAGNQLAAAAHELALPVDQIAYLDGYGRANSFDFYTARLTPSVPLAQLQRG CCHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHCC EGPRYLYTSAGGRDALTAAGVRYDVLASNPDFRITRLNAQFLDPARRPKTLTEHVLLKVG CCCCEEEECCCCCCHHHHCCCEEEEEECCCCEEEEEECHHHCCCCCCCCHHHHHHHHCCC E C >Mature Secondary Structure MRLDSRSVLACYLLLAVAYVGGLMVPLMNNDSAHHAGIALHMHLSGDYLSLVTQGENYLD CCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEEEECCCEEEEEECCCCCCC KPHLLFWLAALGFKVFGVNTFAYKLPSLLFSVLAVYSTARLAALLYSPAAGRLAGLVLAS CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH ALAFVLANNDVRMDALLTGAIAFSIWQLAEFVACPRWRNLALAALGLALGFSTKGMIGVA HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHH MPLIAVFLHLLYRRDWQRLFDPRWLVLGVLTLLPASPVLYAYHHQFGADGVRFILWSQNF HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEECCCH ERLAGERFGNAGAQDPLFFVHTFLWAFLPWSLLALAALWAHGRRVVAARLRPQAGGELIT HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEH LGTLVVLFAIISASRFKLPHYLNILLPLFAVQLAGWLAPRLDAEAGRGLRLAQWVAAALL HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH VAIALALNGWVFPLTSPVVALGAAAIATAGAVLTFRRRGVARVVVATVAVAAVFNFLLNF HHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC NFYPRLLGYQAGNQLAAAAHELALPVDQIAYLDGYGRANSFDFYTARLTPSVPLAQLQRG CCHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHCC EGPRYLYTSAGGRDALTAAGVRYDVLASNPDFRITRLNAQFLDPARRPKTLTEHVLLKVG CCCCEEEECCCCCCHHHHCCCEEEEEECCCCEEEEEECHHHCCCCCCCCHHHHHHHHCCC E C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA