| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is 119897038
Identifier: 119897038
GI number: 119897038
Start: 798162
End: 799442
Strand: Direct
Name: 119897038
Synonym: azo0747
Alternate gene names: NA
Gene position: 798162-799442 (Clockwise)
Preceding gene: 119897037
Following gene: 119897040
Centisome position: 18.24
GC content: 70.34
Gene sequence:
>1281_bases ATGATCAGCGTTCGCCGCTTCGGCTTCATCGCGATTGCAGCGCTCACCGCGTGGGCCGCGCTGCCCGGCTTCAACCCGGC GCCGGCTCCGCGCTTCGTGGCCCCGCCCGCGGCCGCGATGGCTGCTTCCCCGGGGGCGTCGCCGCTGTTTGCCAGCGCAA TCGTCAATCTGCCCGACCCGCCGCGCGTGCATGCGGCGTCGGTGGCGGTGCTCCCCGATGGCCGGCTGTTCGCCACATGG TTCGGCGGGGAGCGCGAAGGCGGCACCGAGGTGAAGGTCTATGCCGCCACCCGCAACCCGGGCGAGGCCGGCTGGGGGCG CCAGCACGCCATCGCCACGCCGGAACAGACCTCGGCCGATGTCGGGCGCCTGGTCCGCAAGATGGGCAACCCGGTGGCCT TCGTCACGCCGCGCGGCGAGTTGTGGGTGGTGTACGTCAGCGTCACCCTCGGCGGCTGGGCCACCAGCCACCTCAACCTG CTGCGCTCGCCCGATCTCGGCACAACCTGGCTGCCGGCGCGCCGGCTTGCCGCCACGCCCTTCTTCAACCTCAGCACGCT GGTGAAGGGCTTTCCGGTGTTCTTCGACAACGGCGATGTCGGGCTGCCGGTGTATCACGAGATGGCGGGCAAGTTTGCCG AATTGCTGGTGTTGTCGGATGAAGGCGAGGTGCGGCACAAGGTGCGCATGGACCACGGCCGGCGCTCCCTGCAGCCGGTG GTGCTGGTGGAGGACGAGCAGCGTGCGGTGGCCTTGATGCGCTATGGCGGTGAGCACGGGCCGTTCCGCGCCTGGCGCAG CGAAACCGCCGACGGCGGGCGAAGCTGGTCGGCGGTGGAGCCGACCACGCTCGCCAATCCCAACTCCGCCCTGGCTGCGC TACGCCTGGATGATGGACGCCTGCTCGCGGTTGCCAACGACACCGAGGACGAACGGCTGCGCCTGTCCCTGCTGGTGAGC GAGGACGGCGGCCGCAACTGGCGGTCGATCCACCGCTTCGAGGACAAGCAGGATTTCGCCGGCCACGAAGCCGGAGGCGA GGTCTTCCGCGCCCGGCTGGAAGCCGACGTGGCCGACCTCGGGCCCGGGCCGGCGGCCGCCGACCTCGTGCGCGTGGCCG AGCGCAACCTGTGCCGCAACCAGGGCGCCTGCGGCTGGCAGTACGACTATCCCTACCTCGTCCGCGCCGCCGACGGCGAC TTCCATCTCGTCTACACCTGGAACCGTTCCTTCGTGCGCCACATTCAGTTCAATCGTGCCTGGCTGGAGGGCAAGCTGTG A
Upstream 100 bases:
>100_bases CCCAAGACCTTGACCGAACATGTGCTGTTGAAGGTGGGCGAATGAGCACCGATACCTCTGCCCGCGCAGCGGAGTCGCGC GCTGCCCTCAGGGAGGTTCA
Downstream 100 bases:
>100_bases TCGCGACCGTGCTCGCAACACTCGCCTGGGCACTGGCTTTGACGCTGTGCGTACCGGGCCTGCACGGGCATCCGCGGCGA GCCCTCGCGGTGCTCGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Neuraminidase; BNR Repeat-Containing Glycosyl Hydrolase; BNR/Asp-Box Repeat Protein; Glycosyl Hydrolase Protein; Glycosyl Hydrolase BNR Repeat; Glycosyl Hydrolase BNR Repeat-Containing Glycosyl Hydrolase; Glycosyl Hydrolase; Sialidase/Neuraminidase Protein; Inner Membrane Protein; BNR/Asp Box Repeat-Containing Protein; Sialidase; BNR/Asp-Box Repeat Domain Protein
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MISVRRFGFIAIAALTAWAALPGFNPAPAPRFVAPPAAAMAASPGASPLFASAIVNLPDPPRVHAASVAVLPDGRLFATW FGGEREGGTEVKVYAATRNPGEAGWGRQHAIATPEQTSADVGRLVRKMGNPVAFVTPRGELWVVYVSVTLGGWATSHLNL LRSPDLGTTWLPARRLAATPFFNLSTLVKGFPVFFDNGDVGLPVYHEMAGKFAELLVLSDEGEVRHKVRMDHGRRSLQPV VLVEDEQRAVALMRYGGEHGPFRAWRSETADGGRSWSAVEPTTLANPNSALAALRLDDGRLLAVANDTEDERLRLSLLVS EDGGRNWRSIHRFEDKQDFAGHEAGGEVFRARLEADVADLGPGPAAADLVRVAERNLCRNQGACGWQYDYPYLVRAADGD FHLVYTWNRSFVRHIQFNRAWLEGKL
Sequences:
>Translated_426_residues MISVRRFGFIAIAALTAWAALPGFNPAPAPRFVAPPAAAMAASPGASPLFASAIVNLPDPPRVHAASVAVLPDGRLFATW FGGEREGGTEVKVYAATRNPGEAGWGRQHAIATPEQTSADVGRLVRKMGNPVAFVTPRGELWVVYVSVTLGGWATSHLNL LRSPDLGTTWLPARRLAATPFFNLSTLVKGFPVFFDNGDVGLPVYHEMAGKFAELLVLSDEGEVRHKVRMDHGRRSLQPV VLVEDEQRAVALMRYGGEHGPFRAWRSETADGGRSWSAVEPTTLANPNSALAALRLDDGRLLAVANDTEDERLRLSLLVS EDGGRNWRSIHRFEDKQDFAGHEAGGEVFRARLEADVADLGPGPAAADLVRVAERNLCRNQGACGWQYDYPYLVRAADGD FHLVYTWNRSFVRHIQFNRAWLEGKL >Mature_426_residues MISVRRFGFIAIAALTAWAALPGFNPAPAPRFVAPPAAAMAASPGASPLFASAIVNLPDPPRVHAASVAVLPDGRLFATW FGGEREGGTEVKVYAATRNPGEAGWGRQHAIATPEQTSADVGRLVRKMGNPVAFVTPRGELWVVYVSVTLGGWATSHLNL LRSPDLGTTWLPARRLAATPFFNLSTLVKGFPVFFDNGDVGLPVYHEMAGKFAELLVLSDEGEVRHKVRMDHGRRSLQPV VLVEDEQRAVALMRYGGEHGPFRAWRSETADGGRSWSAVEPTTLANPNSALAALRLDDGRLLAVANDTEDERLRLSLLVS EDGGRNWRSIHRFEDKQDFAGHEAGGEVFRARLEADVADLGPGPAAADLVRVAERNLCRNQGACGWQYDYPYLVRAADGD FHLVYTWNRSFVRHIQFNRAWLEGKL
Specific function: Unknown
COG id: COG4692
COG function: function code G; Predicted neuraminidase (sialidase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46520; Mature: 46520
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISVRRFGFIAIAALTAWAALPGFNPAPAPRFVAPPAAAMAASPGASPLFASAIVNLPDP CCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHCCCCCC PRVHAASVAVLPDGRLFATWFGGEREGGTEVKVYAATRNPGEAGWGRQHAIATPEQTSAD CCEEEEEEEEECCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHH VGRLVRKMGNPVAFVTPRGELWVVYVSVTLGGWATSHLNLLRSPDLGTTWLPARRLAATP HHHHHHHHCCCEEEEECCCCEEEEEEEEEECCCHHHHHHHHCCCCCCCCCCCHHHHHCCC FFNLSTLVKGFPVFFDNGDVGLPVYHEMAGKFAELLVLSDEGEVRHKVRMDHGRRSLQPV CCCHHHHHCCCCEEECCCCCCCCHHHHHHCCEEEEEEECCCCCCHHHHHHHCCCCCCCCE VLVEDEQRAVALMRYGGEHGPFRAWRSETADGGRSWSAVEPTTLANPNSALAALRLDDGR EEEECCCCEEEHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCE LLAVANDTEDERLRLSLLVSEDGGRNWRSIHRFEDKQDFAGHEAGGEVFRARLEADVADL EEEEECCCCCCEEEEEEEEECCCCCCHHHHHHCCCCHHCCCCCCCHHHHHHHHHCCHHHC GPGPAAADLVRVAERNLCRNQGACGWQYDYPYLVRAADGDFHLVYTWNRSFVRHIQFNRA CCCCHHHHHHHHHHHHHHHCCCCCCEECCCCEEEEECCCCEEEEEEECCCEEHHHHHCHH WLEGKL EECCCC >Mature Secondary Structure MISVRRFGFIAIAALTAWAALPGFNPAPAPRFVAPPAAAMAASPGASPLFASAIVNLPDP CCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHCCCCCC PRVHAASVAVLPDGRLFATWFGGEREGGTEVKVYAATRNPGEAGWGRQHAIATPEQTSAD CCEEEEEEEEECCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHH VGRLVRKMGNPVAFVTPRGELWVVYVSVTLGGWATSHLNLLRSPDLGTTWLPARRLAATP HHHHHHHHCCCEEEEECCCCEEEEEEEEEECCCHHHHHHHHCCCCCCCCCCCHHHHHCCC FFNLSTLVKGFPVFFDNGDVGLPVYHEMAGKFAELLVLSDEGEVRHKVRMDHGRRSLQPV CCCHHHHHCCCCEEECCCCCCCCHHHHHHCCEEEEEEECCCCCCHHHHHHHCCCCCCCCE VLVEDEQRAVALMRYGGEHGPFRAWRSETADGGRSWSAVEPTTLANPNSALAALRLDDGR EEEECCCCEEEHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCE LLAVANDTEDERLRLSLLVSEDGGRNWRSIHRFEDKQDFAGHEAGGEVFRARLEADVADL EEEEECCCCCCEEEEEEEEECCCCCCHHHHHHCCCCHHCCCCCCCHHHHHHHHHCCHHHC GPGPAAADLVRVAERNLCRNQGACGWQYDYPYLVRAADGDFHLVYTWNRSFVRHIQFNRA CCCCHHHHHHHHHHHHHHHCCCCCCEECCCCEEEEECCCCEEEEEEECCCEEHHHHHCHH WLEGKL EECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA