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The map label for this gene is mdcF1

Identifier: 119896716

GI number: 119896716

Start: 449266

End: 450138

Strand: Direct

Name: mdcF1

Synonym: azo0425

Alternate gene names: NA

Gene position: 449266-450138 (Clockwise)

Preceding gene: 119896715

Following gene: 119896725

Centisome position: 10.27

GC content: 67.47

Gene sequence:

>873_bases
ATGCTGACCCGTATCGTCGCGATCCTGTTTCCGCTGTTCGCCATCACCGCGGCGGGCTTCTTCATCGGCCGCCGCCTGAA
GCCCGATCTGTCGCACGCGAACCGGCTCAACATGGACGTGTTCGTGCCGGCGCTGGTGTTCGCGGCACTCGCCAACCGCG
AGTTCCGCATTGGTGAATACCTGCCGTTGCTGGGGCTCACGCTCGCGCTGGTGGCGGGCTCCGGCCTTGTCGGCTGGGTG
GCTGCGCGGGCGCTGAAGGTCGAACCGCGCACCCTGGTGCCGCCGCTGATGTTCAACAACTGCGGCAACCTCGGCCTGCC
GCTGGCGGTGCTTGCCTTCGGCGACGCGGCGTTGATGCCGGCGGTGGTAATGTTCATGGTGTCCAACCTGCTGCACTTTT
CGTTCGGCGCCTGGCTGCTGGATCACCGTGCGCGGCTGGTCAACCTGTGGCGGGTGCCCTCGGTGGCCGCCACCTTCGCC
GGTCTTGCGGTCGGCATCGCCGGCATCGAGGTGTGGCCGCCGCTGATGACCGCGATCAAGATGGTGGGCGATATCTCGAT
TCCGTTGATGCTGTTTGCGCTCGGCGTGCGGCTGACCGATGCGCGGCTGACCTCGGTCGGCCTCGGCGTCTTCGTCGCGC
TGTTGCGGCCGCTCAGTGGCATGGCGCTGGTGTGGGTGCTGCTGCAACTGGTGCCGCTGCCGCCACGCGAAGCGGCGCTG
TTGCTGGTGTTTGGCGCGCTGCCGCCGGCGGTGCTGAACTACATCTTCGCCGAACGCTACCGCCAGGAGCCCGAGAAAGT
GGCGTCCATGGTGCTCATCGGCAACCTCGCCGCGGTGCTGTTCCTGCCGCTGGCACTGGCGTTGGCGCTGTAG

Upstream 100 bases:

>100_bases
TTTCGCCCGCCTTTCCGGCCCTTCTTCCCGTGCCCGCCCCGGCCCGTAGCGGCGTGATCCGTTGCGGGGCCGGGGCGCGG
CCGCCATTCATGATGTCTTC

Downstream 100 bases:

>100_bases
TTCTCAATACGTGCTGCGCGGCGTCGCCCCGGCGCTGCGGCCGCTCGCCACCGTCGTCAGTCCGCGCCCGGTGCGCTTGC
TGCGGTACATCGCGGTGTCG

Product: putative malonate transporter

Products: NA

Alternate protein names: Auxin Efflux Carrier Family Protein; Permease; Malonate Transporter; Transporter Auxin Efflux Carrier Family; Auxin Efflux Carrier Superfamily; Transporter AEC Family; Auxin Efflux Carrier Protein; Membrane Transport Family

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MLTRIVAILFPLFAITAAGFFIGRRLKPDLSHANRLNMDVFVPALVFAALANREFRIGEYLPLLGLTLALVAGSGLVGWV
AARALKVEPRTLVPPLMFNNCGNLGLPLAVLAFGDAALMPAVVMFMVSNLLHFSFGAWLLDHRARLVNLWRVPSVAATFA
GLAVGIAGIEVWPPLMTAIKMVGDISIPLMLFALGVRLTDARLTSVGLGVFVALLRPLSGMALVWVLLQLVPLPPREAAL
LLVFGALPPAVLNYIFAERYRQEPEKVASMVLIGNLAAVLFLPLALALAL

Sequences:

>Translated_290_residues
MLTRIVAILFPLFAITAAGFFIGRRLKPDLSHANRLNMDVFVPALVFAALANREFRIGEYLPLLGLTLALVAGSGLVGWV
AARALKVEPRTLVPPLMFNNCGNLGLPLAVLAFGDAALMPAVVMFMVSNLLHFSFGAWLLDHRARLVNLWRVPSVAATFA
GLAVGIAGIEVWPPLMTAIKMVGDISIPLMLFALGVRLTDARLTSVGLGVFVALLRPLSGMALVWVLLQLVPLPPREAAL
LLVFGALPPAVLNYIFAERYRQEPEKVASMVLIGNLAAVLFLPLALALAL
>Mature_290_residues
MLTRIVAILFPLFAITAAGFFIGRRLKPDLSHANRLNMDVFVPALVFAALANREFRIGEYLPLLGLTLALVAGSGLVGWV
AARALKVEPRTLVPPLMFNNCGNLGLPLAVLAFGDAALMPAVVMFMVSNLLHFSFGAWLLDHRARLVNLWRVPSVAATFA
GLAVGIAGIEVWPPLMTAIKMVGDISIPLMLFALGVRLTDARLTSVGLGVFVALLRPLSGMALVWVLLQLVPLPPREAAL
LLVFGALPPAVLNYIFAERYRQEPEKVASMVLIGNLAAVLFLPLALALAL

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31144; Mature: 31144

Theoretical pI: Translated: 10.84; Mature: 10.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTRIVAILFPLFAITAAGFFIGRRLKPDLSHANRLNMDVFVPALVFAALANREFRIGEY
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHH
LPLLGLTLALVAGSGLVGWVAARALKVEPRTLVPPLMFNNCGNLGLPLAVLAFGDAALMP
HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHHHCCHHHHH
AVVMFMVSNLLHFSFGAWLLDHRARLVNLWRVPSVAATFAGLAVGIAGIEVWPPLMTAIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVGDISIPLMLFALGVRLTDARLTSVGLGVFVALLRPLSGMALVWVLLQLVPLPPREAAL
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHH
LLVFGALPPAVLNYIFAERYRQEPEKVASMVLIGNLAAVLFLPLALALAL
HHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLTRIVAILFPLFAITAAGFFIGRRLKPDLSHANRLNMDVFVPALVFAALANREFRIGEY
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHH
LPLLGLTLALVAGSGLVGWVAARALKVEPRTLVPPLMFNNCGNLGLPLAVLAFGDAALMP
HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHHHCCHHHHH
AVVMFMVSNLLHFSFGAWLLDHRARLVNLWRVPSVAATFAGLAVGIAGIEVWPPLMTAIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVGDISIPLMLFALGVRLTDARLTSVGLGVFVALLRPLSGMALVWVLLQLVPLPPREAAL
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHH
LLVFGALPPAVLNYIFAERYRQEPEKVASMVLIGNLAAVLFLPLALALAL
HHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA