| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
Click here to switch to the map view.
The map label for this gene is disA [H]
Identifier: 119870857
GI number: 119870857
Start: 5058444
End: 5059559
Strand: Direct
Name: disA [H]
Synonym: Mkms_4829
Alternate gene names: 119870857
Gene position: 5058444-5059559 (Clockwise)
Preceding gene: 119870856
Following gene: 119870860
Centisome position: 88.17
GC content: 67.47
Gene sequence:
>1116_bases ATGGCCGTGAAGAACGCCAGGACGAGCAGTAACGTCGTCCAGCTGGCCCGTCCGACGCTGCGGGAGACGCTGGGCCGGCT GGCACCCGGGACACCCTTGCGCGACGGTCTGGAGCGCATCCTGCGTGGCCGCACCGGCGCTCTGATCGTGCTGGGTTACG ACGACAGCGTCGAGACGATCTGCGACGGTGGTTTCGAACTCGACGTGCGCTACGCCCCGACCCGGTTACGCGAGCTGTCG AAGATGGATGGCGCCGTCGTGCTCTCCAGCGACGGCACGCGGATCCTGCGGGCCAACGTCCAGCTCGTGCCCGATCCCTC GATCCCGACCGACGAATCCGGGACGCGTCACCGCTCCGCCGAACGCACCGCGATCCAGACCGGGTATCCGGTGATCTCCG TCAGCCACTCGATGAGCATCGTGACGGTGTACGTGGCCGGCGAGCGGCACGTGGTTCCCGACACCCCGACGATCCTGTCG CGCGCCAACCAGACCATCGCGACGCTCGAGCGCTACAAATCCCGCCTCGACGAGGTGAGCCGCCAGCTGTCGACCGCGGA GATCGAGGACTTCGTGACCCTGCGCGACGTGATGACCGTCGTGCAGCGGTTGGAGATGGTGCGGCGGATCAGCCTGGAGA TCGACGCCGACGTGGTCGAACTCGGCACCGACGGCCGTCAGCTCAAACTGCAGCTCGAGGAGCTCGTGGGGGACAACGAC ACCGCCCGCGAGCTGATCGTGCGCGACTACCACGCCAACCCCGACCCGCCCACTCCCGCCCAGGTCAGCGCGACACTCGA GGAACTGGACTCGCTGTCGGACAACGAGCTGCTCGACTTCACCACGCTGGCAAGGGTTTTCGGTTATCCGTCCACCCTCG AGGCGCAGGATTCGGCGATGAGCTCCCGCGGTTACCGCGCGATGGCCGGCATCCCCCGCCTGCAGTTCGCCCACGTGGAT CTGTTGGTGCGTTCGTTCGGCTCACTGCAGGGCCTACTGGCCGCCAGCGCCGACGATCTGCAGTCGGTGGAGGGCATCGG TTCGATGTGGGCGCGCCACATCAGGGAAGGTCTGTCGCTGCTGGCCGAGTCGACGATCGCCGACCGGCTGGCCTGA
Upstream 100 bases:
>100_bases CGCGAAGAGCAGACAGCAGCGATGAGCGCTTGCGCGAAGAGCAGACAGCAGCGATGAGCGCTTGCGCGAAGAGCAGACAG CAGCGCGCCCGGGAGGAATG
Downstream 100 bases:
>100_bases TCGACCTCAGCCCGCGCCTGCGGCGGGCGGCTGCGCACCCGGGGCGCCGGGCGCCGGCGCCTGACCCGGCGGCGTGGCCG GGGCCAAGATGAACGGCACC
Product: DNA integrity scanning protein DisA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MAVKNARTSSNVVQLARPTLRETLGRLAPGTPLRDGLERILRGRTGALIVLGYDDSVETICDGGFELDVRYAPTRLRELS KMDGAVVLSSDGTRILRANVQLVPDPSIPTDESGTRHRSAERTAIQTGYPVISVSHSMSIVTVYVAGERHVVPDTPTILS RANQTIATLERYKSRLDEVSRQLSTAEIEDFVTLRDVMTVVQRLEMVRRISLEIDADVVELGTDGRQLKLQLEELVGDND TARELIVRDYHANPDPPTPAQVSATLEELDSLSDNELLDFTTLARVFGYPSTLEAQDSAMSSRGYRAMAGIPRLQFAHVD LLVRSFGSLQGLLAASADDLQSVEGIGSMWARHIREGLSLLAESTIADRLA
Sequences:
>Translated_371_residues MAVKNARTSSNVVQLARPTLRETLGRLAPGTPLRDGLERILRGRTGALIVLGYDDSVETICDGGFELDVRYAPTRLRELS KMDGAVVLSSDGTRILRANVQLVPDPSIPTDESGTRHRSAERTAIQTGYPVISVSHSMSIVTVYVAGERHVVPDTPTILS RANQTIATLERYKSRLDEVSRQLSTAEIEDFVTLRDVMTVVQRLEMVRRISLEIDADVVELGTDGRQLKLQLEELVGDND TARELIVRDYHANPDPPTPAQVSATLEELDSLSDNELLDFTTLARVFGYPSTLEAQDSAMSSRGYRAMAGIPRLQFAHVD LLVRSFGSLQGLLAASADDLQSVEGIGSMWARHIREGLSLLAESTIADRLA >Mature_370_residues AVKNARTSSNVVQLARPTLRETLGRLAPGTPLRDGLERILRGRTGALIVLGYDDSVETICDGGFELDVRYAPTRLRELSK MDGAVVLSSDGTRILRANVQLVPDPSIPTDESGTRHRSAERTAIQTGYPVISVSHSMSIVTVYVAGERHVVPDTPTILSR ANQTIATLERYKSRLDEVSRQLSTAEIEDFVTLRDVMTVVQRLEMVRRISLEIDADVVELGTDGRQLKLQLEELVGDNDT ARELIVRDYHANPDPPTPAQVSATLEELDSLSDNELLDFTTLARVFGYPSTLEAQDSAMSSRGYRAMAGIPRLQFAHVDL LVRSFGSLQGLLAASADDLQSVEGIGSMWARHIREGLSLLAESTIADRLA
Specific function: Participates in a DNA-damage check-point. DisA forms globular foci that rapidly scan along the chromosomes searching for lesions [H]
COG id: COG1623
COG function: function code R; Predicted nucleic-acid-binding protein (contains the HHH domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the disA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018906 - InterPro: IPR003390 - InterPro: IPR010994 [H]
Pfam domain/function: PF10635 DisA-linker; PF02457 DisA_N [H]
EC number: NA
Molecular weight: Translated: 40649; Mature: 40517
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVKNARTSSNVVQLARPTLRETLGRLAPGTPLRDGLERILRGRTGALIVLGYDDSVETI CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHH CDGGFELDVRYAPTRLRELSKMDGAVVLSSDGTRILRANVQLVPDPSIPTDESGTRHRSA HCCCCEEEEEECCHHHHHHHHCCCEEEEECCCCEEEEECEEEECCCCCCCCCCCCCCCHH ERTAIQTGYPVISVSHSMSIVTVYVAGERHVVPDTPTILSRANQTIATLERYKSRLDEVS HHHHHHCCCCEEEECCCCEEEEEEEECCCEECCCCHHHHHHCCHHHHHHHHHHHHHHHHH RQLSTAEIEDFVTLRDVMTVVQRLEMVRRISLEIDADVVELGTDGRQLKLQLEELVGDND HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEECCCCCHHHHEEHHHHCCCCH TARELIVRDYHANPDPPTPAQVSATLEELDSLSDNELLDFTTLARVFGYPSTLEAQDSAM HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHH SSRGYRAMAGIPRLQFAHVDLLVRSFGSLQGLLAASADDLQSVEGIGSMWARHIREGLSL HHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH LAESTIADRLA HHHHHHHHHCC >Mature Secondary Structure AVKNARTSSNVVQLARPTLRETLGRLAPGTPLRDGLERILRGRTGALIVLGYDDSVETI CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHH CDGGFELDVRYAPTRLRELSKMDGAVVLSSDGTRILRANVQLVPDPSIPTDESGTRHRSA HCCCCEEEEEECCHHHHHHHHCCCEEEEECCCCEEEEECEEEECCCCCCCCCCCCCCCHH ERTAIQTGYPVISVSHSMSIVTVYVAGERHVVPDTPTILSRANQTIATLERYKSRLDEVS HHHHHHCCCCEEEECCCCEEEEEEEECCCEECCCCHHHHHHCCHHHHHHHHHHHHHHHHH RQLSTAEIEDFVTLRDVMTVVQRLEMVRRISLEIDADVVELGTDGRQLKLQLEELVGDND HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEECCCCCHHHHEEHHHHCCCCH TARELIVRDYHANPDPPTPAQVSATLEELDSLSDNELLDFTTLARVFGYPSTLEAQDSAM HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHH SSRGYRAMAGIPRLQFAHVDLLVRSFGSLQGLLAASADDLQSVEGIGSMWARHIREGLSL HHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH LAESTIADRLA HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]