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The map label for this gene is lpqE [H]

Identifier: 119870855

GI number: 119870855

Start: 5056262

End: 5056840

Strand: Direct

Name: lpqE [H]

Synonym: Mkms_4827

Alternate gene names: 119870855

Gene position: 5056262-5056840 (Clockwise)

Preceding gene: 119870849

Following gene: 119870856

Centisome position: 88.13

GC content: 71.33

Gene sequence:

>579_bases
GTGAACCGCATCCATCCGCGCGCTTCTGCCGTCACCGCCGGGCTCGCCGCCTGCGGGCTGGCGTTCGCCCTCACGGCCTG
CGGATCCGGCCAGATCTCCCAGACCGCCACGCAGGCGCCCGCCGTCAACGGCGTCAACGCCGGTACCGGTGACGTCTCGC
TGCGCAACGTCCACCTGCGCGCTCCGCAGACCTCGGATTACGTCCGTCCGGGCAGCGACGTCGAACTCCTCTTCGTGGCC
ACCAACGATTCGCCCGACCAGCCCGACAAGCTGGTGTCCATCCGCTCCGACATCGGATCGGTGCCGGTGCGCGGGAAGGC
CGACATCGCGCCGGGTGGCGTGCTGGTCGCCGGCGAACCCGACGGTCAGACCGCCGCGCTGGAGAGCGTCGAGCCGGCCG
AACCGCTGACCGTCGACGTGAAGCTGACCAAGCCGATCACCAACGGGCTGACCTACCCCTTCACGTTCGCGTTCGAGCGC
AGCGGTGAGGTCACCGTCCAGGTCCCGATCTCGGCGGGCGAGGCGCCGCGGCGTGACGACAGCGGCGGCGGCGGCTCCGA
GCACTCCGGCGGACACTGA

Upstream 100 bases:

>100_bases
CGTGCCGTGCGGCCCACCGTCGCCACCACCGACCCTCACCTACTACTCTGCATAGTCGAACTGTGTACGACCGCTGGGCG
ACCCTCTGCAGGAGGCTTGA

Downstream 100 bases:

>100_bases
CCCGTAGCGCGACACGGGCACGGCCCGAGTCGATCTGTCGGCCCCGACCGATACCGTCGTCCCGTGGCCAAGGCACGTTC
TCAATACCGCTGTTCGGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MNRIHPRASAVTAGLAACGLAFALTACGSGQISQTATQAPAVNGVNAGTGDVSLRNVHLRAPQTSDYVRPGSDVELLFVA
TNDSPDQPDKLVSIRSDIGSVPVRGKADIAPGGVLVAGEPDGQTAALESVEPAEPLTVDVKLTKPITNGLTYPFTFAFER
SGEVTVQVPISAGEAPRRDDSGGGGSEHSGGH

Sequences:

>Translated_192_residues
MNRIHPRASAVTAGLAACGLAFALTACGSGQISQTATQAPAVNGVNAGTGDVSLRNVHLRAPQTSDYVRPGSDVELLFVA
TNDSPDQPDKLVSIRSDIGSVPVRGKADIAPGGVLVAGEPDGQTAALESVEPAEPLTVDVKLTKPITNGLTYPFTFAFER
SGEVTVQVPISAGEAPRRDDSGGGGSEHSGGH
>Mature_192_residues
MNRIHPRASAVTAGLAACGLAFALTACGSGQISQTATQAPAVNGVNAGTGDVSLRNVHLRAPQTSDYVRPGSDVELLFVA
TNDSPDQPDKLVSIRSDIGSVPVRGKADIAPGGVLVAGEPDGQTAALESVEPAEPLTVDVKLTKPITNGLTYPFTFAFER
SGEVTVQVPISAGEAPRRDDSGGGGSEHSGGH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19525; Mature: 19525

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRIHPRASAVTAGLAACGLAFALTACGSGQISQTATQAPAVNGVNAGTGDVSLRNVHLR
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCEEEEEEEEE
APQTSDYVRPGSDVELLFVATNDSPDQPDKLVSIRSDIGSVPVRGKADIAPGGVLVAGEP
CCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHEEHHHCCCCCCCCCCCCCCCCEEEEECC
DGQTAALESVEPAEPLTVDVKLTKPITNGLTYPFTFAFERSGEVTVQVPISAGEAPRRDD
CCCEEEECCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCC
SGGGGSEHSGGH
CCCCCCCCCCCC
>Mature Secondary Structure
MNRIHPRASAVTAGLAACGLAFALTACGSGQISQTATQAPAVNGVNAGTGDVSLRNVHLR
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCEEEEEEEEE
APQTSDYVRPGSDVELLFVATNDSPDQPDKLVSIRSDIGSVPVRGKADIAPGGVLVAGEP
CCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHEEHHHCCCCCCCCCCCCCCCCEEEEECC
DGQTAALESVEPAEPLTVDVKLTKPITNGLTYPFTFAFERSGEVTVQVPISAGEAPRRDD
CCCEEEECCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCC
SGGGGSEHSGGH
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]