| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119870843
Identifier: 119870843
GI number: 119870843
Start: 5045303
End: 5046514
Strand: Direct
Name: 119870843
Synonym: Mkms_4815
Alternate gene names: NA
Gene position: 5045303-5046514 (Clockwise)
Preceding gene: 119870841
Following gene: 119870846
Centisome position: 87.94
GC content: 70.21
Gene sequence:
>1212_bases ATGGTGGCGTTCGACCGTTCGACCGGCGACGATACTCAGCGCTGGGCCTACCCATTGCTGCTCGTCCTGAGCGGGGTCGC GCTCGGCGTCTCCGGCCTACCCGCGCCGCTCTACGGCATGTACGAGGCGAACTGGCATCTGTCCCCGCTGGCCACCACGA TCATTTTCGCGGTGTACGCGATCGCCGCACTCGGCGCGGTGCTGGTGTCCGGCCGGATCTCCGACGTGGTCGGCCGCAAG CCGGTGCTGATCGCCGCCCTCGCGGCGCTGGTGATCGGACTCGGGGTGTTCCTCGTCGCCGACAACATGGCCCTGCTGCT GCTCGCACGGGCCATCCACGGCGCCGCCGTCGGCTCGATCGTCGTCGCCGGGGCCGCCGCACTGCTCGACCTGCGACCCC ACCACGGGGTGCGCTCCGGGCAACTCAGCGGCGTGAGCTTCAACATCGGGATGACCGTCGCAATCCTCGGATCGGCGTTG CTGGCTCAGTACGCACCGCATCCGCTGCGCACGCCCTACGCCGTTGTCGCGGTGCTGTGCCTCATCGTCGGCGCCGGTCT CCTGGCACTGCGCGAACCACATATCGCACGCACGCGAGGCCGCATCCGCGTCGCAAAACCCGCGGTGCCACAGGAGATCA GAGGTGACTTCTGGTTCTCCGCGCTGGGCGCCATGGCGTCCTGGTCGGTGCTGGGCGTGTTGCTGTCGCTCTACCCGTCG CTGGCGGCGCGGCAGACGCATATCGACAACCTGGTCTTCGGCGGCGCGGTCGTCGGCACCACGGCGTTCGCCGCCGCGCT CGCCCAACTTGCATCAACGCGGGTGCCGGCCCGTCGCGCCGCGATCGTCGGCGACATCGGCATGGCGCTCTCACTGCTGC TCACGATCCCGGTGCTGCTGAGCCATCAGTGGCCGCTGGTGTTCGTGGCGGCAGCGCTGCTCGGTGCGACATTCGGGCTC GGGTTCGGCGGCTCGTTGCGCCACCTGTCCGACGTGGTCCCCGCCGGCAGGCGCGGTGAGACCATGTCGGCGTTCTACCT GGCGGCGTACACGGCGATGGCGGTCCCGACGCTGCTCGCCGGGTGGGCGGCGACCACCTGGGAACTCGTGGTGGTGTTCC CGTGGTTCGCCGTCGCGGTGGCCACTGCCTGCGTGGGTGCGGCCGTCGCGGGTATGCGTAGCGCCAGAGCCGCTGCCGCC GAAGCCTACTGA
Upstream 100 bases:
>100_bases TTCCGTCATGAGAGTGTCCTTCACCACGCAAGTTTGATGATCGTCGAACCGAGCGTACTCTCGATGAGGTTCGATGTCCG TCAAACTGCGAAGGTACGCG
Downstream 100 bases:
>100_bases CGCCGCCCGCCGATCTCCGTAACGTTGTACGCCGTCAGCGGATCACTCTTCTGACGCGCCGGTTCTTTCTGCGGCACAGA CCGTTTCGGCGCCTTCTTCC
Product: major facilitator superfamily transporter
Products: NA
Alternate protein names: Facilitator Superfamily Transporter; Multi-Drug Efflux Transporter; Multidrug Resistance Protein; Facilitator Superfamily Transporter Permease; Mutlidrug Resistance Protein; Drug Efflux Protein; Facilitator Superfamily Protein; Facilitator Superfamily; Facilitator Superfamily Multidrug Efflux Transporter; Permease Of Facilitator Superfamily; ABC Transporter Membrane Protein; Multidrug ABC Transporter; Facilitator Superfamily Multidrug Resistance Protein; Drug Resistance Efflux Protein; Facilitator Family Protein; Multidrug-Efflux MFS Permease
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MVAFDRSTGDDTQRWAYPLLLVLSGVALGVSGLPAPLYGMYEANWHLSPLATTIIFAVYAIAALGAVLVSGRISDVVGRK PVLIAALAALVIGLGVFLVADNMALLLLARAIHGAAVGSIVVAGAAALLDLRPHHGVRSGQLSGVSFNIGMTVAILGSAL LAQYAPHPLRTPYAVVAVLCLIVGAGLLALREPHIARTRGRIRVAKPAVPQEIRGDFWFSALGAMASWSVLGVLLSLYPS LAARQTHIDNLVFGGAVVGTTAFAAALAQLASTRVPARRAAIVGDIGMALSLLLTIPVLLSHQWPLVFVAAALLGATFGL GFGGSLRHLSDVVPAGRRGETMSAFYLAAYTAMAVPTLLAGWAATTWELVVVFPWFAVAVATACVGAAVAGMRSARAAAA EAY
Sequences:
>Translated_403_residues MVAFDRSTGDDTQRWAYPLLLVLSGVALGVSGLPAPLYGMYEANWHLSPLATTIIFAVYAIAALGAVLVSGRISDVVGRK PVLIAALAALVIGLGVFLVADNMALLLLARAIHGAAVGSIVVAGAAALLDLRPHHGVRSGQLSGVSFNIGMTVAILGSAL LAQYAPHPLRTPYAVVAVLCLIVGAGLLALREPHIARTRGRIRVAKPAVPQEIRGDFWFSALGAMASWSVLGVLLSLYPS LAARQTHIDNLVFGGAVVGTTAFAAALAQLASTRVPARRAAIVGDIGMALSLLLTIPVLLSHQWPLVFVAAALLGATFGL GFGGSLRHLSDVVPAGRRGETMSAFYLAAYTAMAVPTLLAGWAATTWELVVVFPWFAVAVATACVGAAVAGMRSARAAAA EAY >Mature_403_residues MVAFDRSTGDDTQRWAYPLLLVLSGVALGVSGLPAPLYGMYEANWHLSPLATTIIFAVYAIAALGAVLVSGRISDVVGRK PVLIAALAALVIGLGVFLVADNMALLLLARAIHGAAVGSIVVAGAAALLDLRPHHGVRSGQLSGVSFNIGMTVAILGSAL LAQYAPHPLRTPYAVVAVLCLIVGAGLLALREPHIARTRGRIRVAKPAVPQEIRGDFWFSALGAMASWSVLGVLLSLYPS LAARQTHIDNLVFGGAVVGTTAFAAALAQLASTRVPARRAAIVGDIGMALSLLLTIPVLLSHQWPLVFVAAALLGATFGL GFGGSLRHLSDVVPAGRRGETMSAFYLAAYTAMAVPTLLAGWAATTWELVVVFPWFAVAVATACVGAAVAGMRSARAAAA EAY
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41549; Mature: 41549
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAFDRSTGDDTQRWAYPLLLVLSGVALGVSGLPAPLYGMYEANWHLSPLATTIIFAVYA CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCEECCCCCHHHHHHHHHHHHH IAALGAVLVSGRISDVVGRKPVLIAALAALVIGLGVFLVADNMALLLLARAIHGAAVGSI HHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH VVAGAAALLDLRPHHGVRSGQLSGVSFNIGMTVAILGSALLAQYAPHPLRTPYAVVAVLC HHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH LIVGAGLLALREPHIARTRGRIRVAKPAVPQEIRGDFWFSALGAMASWSVLGVLLSLYPS HHHHCCHHHHCCCCHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAARQTHIDNLVFGGAVVGTTAFAAALAQLASTRVPARRAAIVGDIGMALSLLLTIPVLL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH SHQWPLVFVAAALLGATFGLGFGGSLRHLSDVVPAGRRGETMSAFYLAAYTAMAVPTLLA CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH GWAATTWELVVVFPWFAVAVATACVGAAVAGMRSARAAAAEAY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVAFDRSTGDDTQRWAYPLLLVLSGVALGVSGLPAPLYGMYEANWHLSPLATTIIFAVYA CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCEECCCCCHHHHHHHHHHHHH IAALGAVLVSGRISDVVGRKPVLIAALAALVIGLGVFLVADNMALLLLARAIHGAAVGSI HHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH VVAGAAALLDLRPHHGVRSGQLSGVSFNIGMTVAILGSALLAQYAPHPLRTPYAVVAVLC HHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH LIVGAGLLALREPHIARTRGRIRVAKPAVPQEIRGDFWFSALGAMASWSVLGVLLSLYPS HHHHCCHHHHCCCCHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAARQTHIDNLVFGGAVVGTTAFAAALAQLASTRVPARRAAIVGDIGMALSLLLTIPVLL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH SHQWPLVFVAAALLGATFGLGFGGSLRHLSDVVPAGRRGETMSAFYLAAYTAMAVPTLLA CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH GWAATTWELVVVFPWFAVAVATACVGAAVAGMRSARAAAAEAY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA