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The map label for this gene is ybgL [C]

Identifier: 119870841

GI number: 119870841

Start: 5044131

End: 5044895

Strand: Direct

Name: ybgL [C]

Synonym: Mkms_4813

Alternate gene names: 119870841

Gene position: 5044131-5044895 (Clockwise)

Preceding gene: 119870840

Following gene: 119870843

Centisome position: 87.92

GC content: 71.24

Gene sequence:

>765_bases
GTGTCCGCCTCGTCCGTCGACCTCAACGCCGACCTCGGCGAGGGATACGGGGTGTGGACGCTCGGCGACGACGACGCGAT
GCTGGACATCGTCACCTCGGCCAACGTGGCCTGCGGCTTCCACGCCGGCGACCCGGCGAGGCTGGTCCGCGTGTGCCGGG
CGGCCGCCGCCCGCGGCGTGCGCATCGGCGCCCAGGTCAGCTACCGCGACCTCGAGGGCTTCGGCAGGCGTTTCATCGAC
GCGGCCGCCGAGGAGTTGGCCGCCGACGTGATGTACCAGATCGGGGCGCTCTCGGCGTTGGCGACCGCCGCGGGCACCAC
CGTCTCCTATGTCAAACCCCATGGCGCCCTGTACAACGCGATCGTCACCCACCGCGATCAGGCGCGCGCGGTCGCCACCG
CAGTGCATGCGGTGGACCCCGGCCTGCTGGTGCTGGGGCTGCCGGGTTCGGCGTTCTTGGACGAGGCGCGCGAATTGGGG
CTGCAGACGGTGACCGAGGCGTTCGCCGACCGGGCCTACCAACCCGACGGACAGCTCGTCTCGCGGCGTGAGCCGGGTGC
GGTGATCCACGACCTCGACGAGGTCGCCGACCGCGTCATCTCGATGGTGACGGCCGGCCGCGTCACCGCGATCGACGGCT
CGACGGTCGAGATTGCGGTGAAATCGATTTGCGTGCACGGGGATTCGCCTGGTGCGGTACACATCGCCGCGGCCGTGCGC
GACCGGCTGACCGCCGAGGGCGTCACCCTCGCTCCGTTCAGCTGA

Upstream 100 bases:

>100_bases
TGACCGCCGACGGGACGACAGTGGTCACCGCCACGCACGATCCCGAGGTCGTCCGCGCGGCCGATCACCGCATCGACCTC
GGCCCACTAGGCTGACAGTC

Downstream 100 bases:

>100_bases
CGCCGGCCTGTCTGTTCGCGCCCCGCACGACACTGTCGAGCAGTCCCGGGATGGCGGCGTCCACCTCGTCGCGCCGCAGC
CGCTGATGGATCAGACCGTC

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MSASSVDLNADLGEGYGVWTLGDDDAMLDIVTSANVACGFHAGDPARLVRVCRAAAARGVRIGAQVSYRDLEGFGRRFID
AAAEELAADVMYQIGALSALATAAGTTVSYVKPHGALYNAIVTHRDQARAVATAVHAVDPGLLVLGLPGSAFLDEARELG
LQTVTEAFADRAYQPDGQLVSRREPGAVIHDLDEVADRVISMVTAGRVTAIDGSTVEIAVKSICVHGDSPGAVHIAAAVR
DRLTAEGVTLAPFS

Sequences:

>Translated_254_residues
MSASSVDLNADLGEGYGVWTLGDDDAMLDIVTSANVACGFHAGDPARLVRVCRAAAARGVRIGAQVSYRDLEGFGRRFID
AAAEELAADVMYQIGALSALATAAGTTVSYVKPHGALYNAIVTHRDQARAVATAVHAVDPGLLVLGLPGSAFLDEARELG
LQTVTEAFADRAYQPDGQLVSRREPGAVIHDLDEVADRVISMVTAGRVTAIDGSTVEIAVKSICVHGDSPGAVHIAAAVR
DRLTAEGVTLAPFS
>Mature_253_residues
SASSVDLNADLGEGYGVWTLGDDDAMLDIVTSANVACGFHAGDPARLVRVCRAAAARGVRIGAQVSYRDLEGFGRRFIDA
AAEELAADVMYQIGALSALATAAGTTVSYVKPHGALYNAIVTHRDQARAVATAVHAVDPGLLVLGLPGSAFLDEARELGL
QTVTEAFADRAYQPDGQLVSRREPGAVIHDLDEVADRVISMVTAGRVTAIDGSTVEIAVKSICVHGDSPGAVHIAAAVRD
RLTAEGVTLAPFS

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=248, Percent_Identity=42.3387096774194, Blast_Score=195, Evalue=3e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 26352; Mature: 26221

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASSVDLNADLGEGYGVWTLGDDDAMLDIVTSANVACGFHAGDPARLVRVCRAAAARGV
CCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHHCCE
RIGAQVSYRDLEGFGRRFIDAAAEELAADVMYQIGALSALATAAGTTVSYVKPHGALYNA
EECCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHH
IVTHRDQARAVATAVHAVDPGLLVLGLPGSAFLDEARELGLQTVTEAFADRAYQPDGQLV
HHHCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
SRREPGAVIHDLDEVADRVISMVTAGRVTAIDGSTVEIAVKSICVHGDSPGAVHIAAAVR
CCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEEEEEEECCCCCEEEEHHHHH
DRLTAEGVTLAPFS
HHHHHCCEEECCCC
>Mature Secondary Structure 
SASSVDLNADLGEGYGVWTLGDDDAMLDIVTSANVACGFHAGDPARLVRVCRAAAARGV
CCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHHCCE
RIGAQVSYRDLEGFGRRFIDAAAEELAADVMYQIGALSALATAAGTTVSYVKPHGALYNA
EECCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHH
IVTHRDQARAVATAVHAVDPGLLVLGLPGSAFLDEARELGLQTVTEAFADRAYQPDGQLV
HHHCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
SRREPGAVIHDLDEVADRVISMVTAGRVTAIDGSTVEIAVKSICVHGDSPGAVHIAAAVR
CCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEEEEEEECCCCCEEEEHHHHH
DRLTAEGVTLAPFS
HHHHHCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA