| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is yaaI [H]
Identifier: 119869649
GI number: 119869649
Start: 3806844
End: 3807383
Strand: Direct
Name: yaaI [H]
Synonym: Mkms_3617
Alternate gene names: 119869649
Gene position: 3806844-3807383 (Clockwise)
Preceding gene: 119869647
Following gene: 119869650
Centisome position: 66.35
GC content: 62.96
Gene sequence:
>540_bases ATGACCAAGACCGCGGTGCTGATCATCGACATGATGAATACCTACGACCATCCGGACGCCGAGAAACTGACGCCGAACGT CGAAAGGATCATCGATCCGTTGGCGAAACTCATCTCCGACGCCCGCTCCAGGGACGACGTGGACCTCATCTACGTCAACG ACAACTACGGTGACTTCACCGCCGAGTTCAGCGACATCGTGCGCTCCGCGCTCGACGGCGAGCGCCCCGACCTCGTCAAA CCGATCGTGCCGCAACAGGGTTGCCGGGTCATGACCAAAGTGCGCCACAGTGCGTTCTACGCCACATCGCTGGCCTACCT GCTCAACCAACTCCGACCGGAGCGCGTCGTGCTGACCGGGCAGGTGACCGAACAGTGCATCCTCTACACCGCACTCGACG CCTATGTCCGGCACTTCCCGGTGGTCGTCCCCCGCGACGGGGTGGCCCACATCGACGCGGAACTCGGCGAGGCGGCGCTG CGGATGATGGAGCAGAACATGAGCGCCGAACTGATCGCCGCCGCCGATTGTCTGGACTGA
Upstream 100 bases:
>100_bases GGTGCGTGCACGCGGCGATCCGCGCGAAGCCGTGACGGTACGCCGAGTAAAAATCCATGCCACATTGTTGCCCGCATTGG TCGCGGGGTATGCAAGCGAC
Downstream 100 bases:
>100_bases CGTTTAGTCTGGATGAGGTGGAATCACCGGAACTGGTCGCGCTGCTGGCGGGCCGCCGCGTCGCGGTACTCACCGGGGCC GGGATGTCGACCGACTCGGG
Product: isochorismatase hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MTKTAVLIIDMMNTYDHPDAEKLTPNVERIIDPLAKLISDARSRDDVDLIYVNDNYGDFTAEFSDIVRSALDGERPDLVK PIVPQQGCRVMTKVRHSAFYATSLAYLLNQLRPERVVLTGQVTEQCILYTALDAYVRHFPVVVPRDGVAHIDAELGEAAL RMMEQNMSAELIAAADCLD
Sequences:
>Translated_179_residues MTKTAVLIIDMMNTYDHPDAEKLTPNVERIIDPLAKLISDARSRDDVDLIYVNDNYGDFTAEFSDIVRSALDGERPDLVK PIVPQQGCRVMTKVRHSAFYATSLAYLLNQLRPERVVLTGQVTEQCILYTALDAYVRHFPVVVPRDGVAHIDAELGEAAL RMMEQNMSAELIAAADCLD >Mature_178_residues TKTAVLIIDMMNTYDHPDAEKLTPNVERIIDPLAKLISDARSRDDVDLIYVNDNYGDFTAEFSDIVRSALDGERPDLVKP IVPQQGCRVMTKVRHSAFYATSLAYLLNQLRPERVVLTGQVTEQCILYTALDAYVRHFPVVVPRDGVAHIDAELGEAALR MMEQNMSAELIAAADCLD
Specific function: Unknown
COG id: COG1335
COG function: function code Q; Amidases related to nicotinamidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the isochorismatase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000868 [H]
Pfam domain/function: PF00857 Isochorismatase [H]
EC number: NA
Molecular weight: Translated: 20011; Mature: 19880
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKTAVLIIDMMNTYDHPDAEKLTPNVERIIDPLAKLISDARSRDDVDLIYVNDNYGDFT CCCHHEEEEEHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHH AEFSDIVRSALDGERPDLVKPIVPQQGCRVMTKVRHSAFYATSLAYLLNQLRPERVVLTG HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC QVTEQCILYTALDAYVRHFPVVVPRDGVAHIDAELGEAALRMMEQNMSAELIAAADCLD HHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC >Mature Secondary Structure TKTAVLIIDMMNTYDHPDAEKLTPNVERIIDPLAKLISDARSRDDVDLIYVNDNYGDFT CCHHEEEEEHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHH AEFSDIVRSALDGERPDLVKPIVPQQGCRVMTKVRHSAFYATSLAYLLNQLRPERVVLTG HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC QVTEQCILYTALDAYVRHFPVVVPRDGVAHIDAELGEAALRMMEQNMSAELIAAADCLD HHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]