| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119869647
Identifier: 119869647
GI number: 119869647
Start: 3803424
End: 3804758
Strand: Direct
Name: 119869647
Synonym: Mkms_3615
Alternate gene names: NA
Gene position: 3803424-3804758 (Clockwise)
Preceding gene: 119869646
Following gene: 119869649
Centisome position: 66.29
GC content: 69.06
Gene sequence:
>1335_bases ATGGATGGATTGTCTGGCGCGGTCGACCACCTCGTGGCGTCCATCGCCGCTCTGCAAACCGCCTCCATCGACGATCTCTC CTACGAGCAGATCGTGGCCGAACTGGACCGCATCAAAGCAGCGGTGTGGGCGGTGCCCAGTGTGGAGCACCGCCTGACCG CGCGGCTGATGGACGCCGACCCCCATGAACTCGGCGCCACCTCTATCAAGGAGGTGCTGGCCAACCACCTACGCATCTCC CGCAAAGCCGCCGGCGAGCGGCTCACCGACGCGCGCCAGTTGGGGCCGCGCCACACCCTGACCGGGGAGCGGGTGCAGAC CGAGTTGGCCCACACCGCCGCCGCGGTCGCCCGCGGCGACATCGGCACCGCCCATGTGCGGATCATCCAGGACTTCGTCA GGAAACTTCCGGCATGGGTGTCCTGGGAGCGCCGCGACCACTACGAACGCGACCTGGTCGGCCACGCCAGCGCACTGCGG CCCGAGGACCTCCGCAAGGTCGCCGACACCCTGCTGGGGTTCATCGATCAGGACGGCACCGAACCCGACCACCACACCCA CCAACGTCGCCGCGAGTTCACCGTCGGCCGCCAGCAGGCCGACGGGATGAGCCGGGTCTCGGGCTGGCTCACCCCCGAAG CCCGCGCGCACTGGGATGTCATCGCCGCCAAATACGCCGCCCCCGGCGCCAACCTGCCCCACGACGACGCCCACACCGGC CGCGACGACCGCACCACCGGCCAACGCCACCACGACGCGCTCACCACCGTCCTACGCGACGCGGTCACCTCCGGCTCCCT CGGCCAGGTCGCCGGCGTTCCCGCCAGCATCGTCGCGACGATGACGCTCAACGAGCTCGAACGTGCCGCCGGGTGGGCGC ACACCGGCGGCGGCAACAAGATCCCCATCCGGGATCTGATCCGGATGGCCGCCCACTCGCGGCACTACCTGGCGGTGTTC GACGACCACACCGAAGAAATCCTGTATTTCGGCCGCGCCAAACGCTGCGCCACCACCGCCCAACGCCTAGCCCTGTTCGC CCGCGACAGGGGCTGCACCCACCCCGGCTGCACCGTGCCGTTTTACTGGGCCGAAGCCCACCACACCGACGACTACTCCC GCGGTGGGCGCACCGACATCGACGACCTCACCCTGGCGTGTCAACCCGCCAACCTGCTCATCGAAAAGACCGGATGGACC ACCCACCGCCCCGGCAACGGCCGCACCGAATGGACCCCACCCAAGGAACAGGACACCGGCCAACCCCGCATCAACAACCA CTTCCACCCCCACCGCTACCTCACCGACAAGGCAGACGACGACGAACCCGAATAG
Upstream 100 bases:
>100_bases GTGCGCACGCGCGCTGACTCTCGAAACCTCTTTCGTCACAGTGGTTTCCACAGTCACATCGCCGGCGGTTTTGTCAGACC CTCGAACTAGTGTTCGAAGC
Downstream 100 bases:
>100_bases TCAGCCCTTCGGGATCGCGTTCTCGATCTCGTCGAGCCACACTCGCGCGGACATGTCCGACGGCGCGCGCCAGTCACCGC GCGGGGACAGGGAACCCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MDGLSGAVDHLVASIAALQTASIDDLSYEQIVAELDRIKAAVWAVPSVEHRLTARLMDADPHELGATSIKEVLANHLRIS RKAAGERLTDARQLGPRHTLTGERVQTELAHTAAAVARGDIGTAHVRIIQDFVRKLPAWVSWERRDHYERDLVGHASALR PEDLRKVADTLLGFIDQDGTEPDHHTHQRRREFTVGRQQADGMSRVSGWLTPEARAHWDVIAAKYAAPGANLPHDDAHTG RDDRTTGQRHHDALTTVLRDAVTSGSLGQVAGVPASIVATMTLNELERAAGWAHTGGGNKIPIRDLIRMAAHSRHYLAVF DDHTEEILYFGRAKRCATTAQRLALFARDRGCTHPGCTVPFYWAEAHHTDDYSRGGRTDIDDLTLACQPANLLIEKTGWT THRPGNGRTEWTPPKEQDTGQPRINNHFHPHRYLTDKADDDEPE
Sequences:
>Translated_444_residues MDGLSGAVDHLVASIAALQTASIDDLSYEQIVAELDRIKAAVWAVPSVEHRLTARLMDADPHELGATSIKEVLANHLRIS RKAAGERLTDARQLGPRHTLTGERVQTELAHTAAAVARGDIGTAHVRIIQDFVRKLPAWVSWERRDHYERDLVGHASALR PEDLRKVADTLLGFIDQDGTEPDHHTHQRRREFTVGRQQADGMSRVSGWLTPEARAHWDVIAAKYAAPGANLPHDDAHTG RDDRTTGQRHHDALTTVLRDAVTSGSLGQVAGVPASIVATMTLNELERAAGWAHTGGGNKIPIRDLIRMAAHSRHYLAVF DDHTEEILYFGRAKRCATTAQRLALFARDRGCTHPGCTVPFYWAEAHHTDDYSRGGRTDIDDLTLACQPANLLIEKTGWT THRPGNGRTEWTPPKEQDTGQPRINNHFHPHRYLTDKADDDEPE >Mature_444_residues MDGLSGAVDHLVASIAALQTASIDDLSYEQIVAELDRIKAAVWAVPSVEHRLTARLMDADPHELGATSIKEVLANHLRIS RKAAGERLTDARQLGPRHTLTGERVQTELAHTAAAVARGDIGTAHVRIIQDFVRKLPAWVSWERRDHYERDLVGHASALR PEDLRKVADTLLGFIDQDGTEPDHHTHQRRREFTVGRQQADGMSRVSGWLTPEARAHWDVIAAKYAAPGANLPHDDAHTG RDDRTTGQRHHDALTTVLRDAVTSGSLGQVAGVPASIVATMTLNELERAAGWAHTGGGNKIPIRDLIRMAAHSRHYLAVF DDHTEEILYFGRAKRCATTAQRLALFARDRGCTHPGCTVPFYWAEAHHTDDYSRGGRTDIDDLTLACQPANLLIEKTGWT THRPGNGRTEWTPPKEQDTGQPRINNHFHPHRYLTDKADDDEPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Rv1128c/1148c/1588c/1702c/1945/3466 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003870 - InterPro: IPR003615 [H]
Pfam domain/function: PF02720 DUF222 [H]
EC number: NA
Molecular weight: Translated: 49234; Mature: 49234
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGLSGAVDHLVASIAALQTASIDDLSYEQIVAELDRIKAAVWAVPSVEHRLTARLMDAD CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC PHELGATSIKEVLANHLRISRKAAGERLTDARQLGPRHTLTGERVQTELAHTAAAVARGD HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC IGTAHVRIIQDFVRKLPAWVSWERRDHYERDLVGHASALRPEDLRKVADTLLGFIDQDGT CCHHHHHHHHHHHHHCHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC EPDHHTHQRRREFTVGRQQADGMSRVSGWLTPEARAHWDVIAAKYAAPGANLPHDDAHTG CCCHHHHHHHHHHHCCHHHHCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC RDDRTTGQRHHDALTTVLRDAVTSGSLGQVAGVPASIVATMTLNELERAAGWAHTGGGNK CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC IPIRDLIRMAAHSRHYLAVFDDHTEEILYFGRAKRCATTAQRLALFARDRGCTHPGCTVP CCHHHHHHHHHCCCCEEEEECCCHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCE FYWAEAHHTDDYSRGGRTDIDDLTLACQPANLLIEKTGWTTHRPGNGRTEWTPPKEQDTG EEECCCCCCCCCCCCCCCCHHHCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC QPRINNHFHPHRYLTDKADDDEPE CCCCCCCCCCCCEECCCCCCCCCC >Mature Secondary Structure MDGLSGAVDHLVASIAALQTASIDDLSYEQIVAELDRIKAAVWAVPSVEHRLTARLMDAD CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC PHELGATSIKEVLANHLRISRKAAGERLTDARQLGPRHTLTGERVQTELAHTAAAVARGD HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC IGTAHVRIIQDFVRKLPAWVSWERRDHYERDLVGHASALRPEDLRKVADTLLGFIDQDGT CCHHHHHHHHHHHHHCHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC EPDHHTHQRRREFTVGRQQADGMSRVSGWLTPEARAHWDVIAAKYAAPGANLPHDDAHTG CCCHHHHHHHHHHHCCHHHHCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC RDDRTTGQRHHDALTTVLRDAVTSGSLGQVAGVPASIVATMTLNELERAAGWAHTGGGNK CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC IPIRDLIRMAAHSRHYLAVFDDHTEEILYFGRAKRCATTAQRLALFARDRGCTHPGCTVP CCHHHHHHHHHCCCCEEEEECCCHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCE FYWAEAHHTDDYSRGGRTDIDDLTLACQPANLLIEKTGWTTHRPGNGRTEWTPPKEQDTG EEECCCCCCCCCCCCCCCCHHHCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC QPRINNHFHPHRYLTDKADDDEPE CCCCCCCCCCCCEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]