| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119869457
Identifier: 119869457
GI number: 119869457
Start: 3592096
End: 3593382
Strand: Direct
Name: 119869457
Synonym: Mkms_3425
Alternate gene names: NA
Gene position: 3592096-3593382 (Clockwise)
Preceding gene: 119869456
Following gene: 119869458
Centisome position: 62.61
GC content: 72.03
Gene sequence:
>1287_bases ATGCCCGACAATCGGTACGTGCCGCCGGCCTCGACGGTCGAGGTGCTGCAGACCGTGCCGGATTCCGTGCTGCGCCGGTT GAAGCAGTACTCGGGGCGATTAGCCATCGAGGCGGTGGCCTCCATGCAGGACCGGCTGCCGTTCTTCGCCGGCCTGGAGG CCTCGCAGCGCGCGAGCGTGCACCTGGTGGTGCAGACGGCGGTGGTCAACTTCGTCGAGTGGATGCGCAACCCGCAGAGC AACGTCAGCTACACCGCGCAGGCGTTCGAAGTCGTGCCCCAGGACCTGACCCGCCGCATCGCGTTGCGCCAGACGGTCGA GATGGTGCGCACCACGATGGAGTTCTTCGAAGAGGCCGTGCCGCTGCTCGCGCGCTCGGACGAGCAGGTCACGGCCCTGA CCGCCGGCATCCTGCGCTACAGCCGGGATCTGGCGTTCGCCGCCGCCTCGGCCTACGCCGACGCGGCGGAGGCACGCGGC GCGTGGGACACCCGGATGGAGGCCAACGTCGTCGACGCGGTGGTCCGCGGTGACGTCGGGCCGGAGTTGCAGTCCCAGGC GGCCACGCTCAACTGGGACGCCACCGCCCCGGCCACCGTCATCGTCGGCCTCCCCCACCCCGACCGAATCGATCTCGCCG CCGACGACGTGCGCGACATCGTGACCCGCAACGACCGGGCCGCGCTGTCGGATGTGCACGGCACCTGGCTGGTCGCGATC GTCTCGGGGCCGATCTCACCCACCGACCGCTTCCTCAAGGAGATCCTCGTCGCGTTCGCCGACGGCCCGGTCGTCGTCGG CCCGACCGCGCCGACGCTGTCGGCGGCCCACCTGTCGGCCACCGAGGCCATCGCCGGCATGAACGCGGTCGCCGGGTGGA GCGGTGCGCCCCGGCCGGTGTCGGCGCGCGAACTGCTGCCCGAACGTGCGCTGCTCGGGGACGCGACGGCCATCGCGGCG CTGGAAACCGAGGTGATGCGGCCGCTCGGCGACGCGGGCCCGGCACTCACCGAGACCCTCGACGCCTACCTCGACGCGGG GGGCGCGATCGAGGCGTGCGCCCGTCAATTGTTCGTTCATCCAAATACCGTCCGCTACCGGCTCAAACGGATCGCCGACT TCACCGGGCGCGACCCCACCCTGCCGCGCGATGCCTACGTGCTCCGGGTGGCCTCCACCGTCGGCCGGCTCAACCGGCAA GCGGCCCAGTCCAGCCGGGCGAGTGGGCCATCCCCGCAGGTCCCGGCCGCGCGGCCGGCCAGTGCGACCCTCTACCGCAG CGGATGA
Upstream 100 bases:
>100_bases CACAGAATCGCGTCCCCGAAGGCGGCCTAACGCGATTCTGTGTCTGCTCGGCACACCCGGCTTGGAGGTATCCGCCAGAA CCATGGCGTAGCTTTTAGGG
Downstream 100 bases:
>100_bases GATGTTGCGGCCCGATCTCGCTGGAGTCGCATCACATGCCGTTTTGTGGACTTGCTACAAAAACATAAGACGAGGTTCAT AATCTCTTACACGGCGCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MPDNRYVPPASTVEVLQTVPDSVLRRLKQYSGRLAIEAVASMQDRLPFFAGLEASQRASVHLVVQTAVVNFVEWMRNPQS NVSYTAQAFEVVPQDLTRRIALRQTVEMVRTTMEFFEEAVPLLARSDEQVTALTAGILRYSRDLAFAAASAYADAAEARG AWDTRMEANVVDAVVRGDVGPELQSQAATLNWDATAPATVIVGLPHPDRIDLAADDVRDIVTRNDRAALSDVHGTWLVAI VSGPISPTDRFLKEILVAFADGPVVVGPTAPTLSAAHLSATEAIAGMNAVAGWSGAPRPVSARELLPERALLGDATAIAA LETEVMRPLGDAGPALTETLDAYLDAGGAIEACARQLFVHPNTVRYRLKRIADFTGRDPTLPRDAYVLRVASTVGRLNRQ AAQSSRASGPSPQVPAARPASATLYRSG
Sequences:
>Translated_428_residues MPDNRYVPPASTVEVLQTVPDSVLRRLKQYSGRLAIEAVASMQDRLPFFAGLEASQRASVHLVVQTAVVNFVEWMRNPQS NVSYTAQAFEVVPQDLTRRIALRQTVEMVRTTMEFFEEAVPLLARSDEQVTALTAGILRYSRDLAFAAASAYADAAEARG AWDTRMEANVVDAVVRGDVGPELQSQAATLNWDATAPATVIVGLPHPDRIDLAADDVRDIVTRNDRAALSDVHGTWLVAI VSGPISPTDRFLKEILVAFADGPVVVGPTAPTLSAAHLSATEAIAGMNAVAGWSGAPRPVSARELLPERALLGDATAIAA LETEVMRPLGDAGPALTETLDAYLDAGGAIEACARQLFVHPNTVRYRLKRIADFTGRDPTLPRDAYVLRVASTVGRLNRQ AAQSSRASGPSPQVPAARPASATLYRSG >Mature_427_residues PDNRYVPPASTVEVLQTVPDSVLRRLKQYSGRLAIEAVASMQDRLPFFAGLEASQRASVHLVVQTAVVNFVEWMRNPQSN VSYTAQAFEVVPQDLTRRIALRQTVEMVRTTMEFFEEAVPLLARSDEQVTALTAGILRYSRDLAFAAASAYADAAEARGA WDTRMEANVVDAVVRGDVGPELQSQAATLNWDATAPATVIVGLPHPDRIDLAADDVRDIVTRNDRAALSDVHGTWLVAIV SGPISPTDRFLKEILVAFADGPVVVGPTAPTLSAAHLSATEAIAGMNAVAGWSGAPRPVSARELLPERALLGDATAIAAL ETEVMRPLGDAGPALTETLDAYLDAGGAIEACARQLFVHPNTVRYRLKRIADFTGRDPTLPRDAYVLRVASTVGRLNRQA AQSSRASGPSPQVPAARPASATLYRSG
Specific function: Unknown
COG id: COG2508
COG function: function code TQ; Regulator of polyketide synthase expression
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CdaR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45822; Mature: 45691
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDNRYVPPASTVEVLQTVPDSVLRRLKQYSGRLAIEAVASMQDRLPFFAGLEASQRASV CCCCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHCCCCCCCCCCE HLVVQTAVVNFVEWMRNPQSNVSYTAQAFEVVPQDLTRRIALRQTVEMVRTTMEFFEEAV EEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLLARSDEQVTALTAGILRYSRDLAFAAASAYADAAEARGAWDTRMEANVVDAVVRGDVG HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC PELQSQAATLNWDATAPATVIVGLPHPDRIDLAADDVRDIVTRNDRAALSDVHGTWLVAI CHHHHCCEEECCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCEEEEEE VSGPISPTDRFLKEILVAFADGPVVVGPTAPTLSAAHLSATEAIAGMNAVAGWSGAPRPV ECCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCC SARELLPERALLGDATAIAALETEVMRPLGDAGPALTETLDAYLDAGGAIEACARQLFVH CHHHHCHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCC PNTVRYRLKRIADFTGRDPTLPRDAYVLRVASTVGRLNRQAAQSSRASGPSPQVPAARPA CHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC SATLYRSG CCCCCCCC >Mature Secondary Structure PDNRYVPPASTVEVLQTVPDSVLRRLKQYSGRLAIEAVASMQDRLPFFAGLEASQRASV CCCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHCCCCCCCCCCE HLVVQTAVVNFVEWMRNPQSNVSYTAQAFEVVPQDLTRRIALRQTVEMVRTTMEFFEEAV EEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLLARSDEQVTALTAGILRYSRDLAFAAASAYADAAEARGAWDTRMEANVVDAVVRGDVG HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC PELQSQAATLNWDATAPATVIVGLPHPDRIDLAADDVRDIVTRNDRAALSDVHGTWLVAI CHHHHCCEEECCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCEEEEEE VSGPISPTDRFLKEILVAFADGPVVVGPTAPTLSAAHLSATEAIAGMNAVAGWSGAPRPV ECCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCC SARELLPERALLGDATAIAALETEVMRPLGDAGPALTETLDAYLDAGGAIEACARQLFVH CHHHHCHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCC PNTVRYRLKRIADFTGRDPTLPRDAYVLRVASTVGRLNRQAAQSSRASGPSPQVPAARPA CHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC SATLYRSG CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]