| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is aceE [H]
Identifier: 119869456
GI number: 119869456
Start: 3589188
End: 3591977
Strand: Direct
Name: aceE [H]
Synonym: Mkms_3424
Alternate gene names: 119869456
Gene position: 3589188-3591977 (Clockwise)
Preceding gene: 119869452
Following gene: 119869457
Centisome position: 62.56
GC content: 67.31
Gene sequence:
>2790_bases TTGACCACCGAGTTCGTGCGCCAGGATCTGGCCCAAAACTCCTCCACCGCAGCCGAACACGATCGTGTCCGGGTGATCCG TGAGGGTGTTGCATCGTATCTGCCCGACATCGATCCCGATGAGACGAGCGAATGGCTGGAGTCGTTCGACCAGCTGCTCG AACGCTCCGGACCGGCGAGAGCCCGCTACCTGCTGTTGCGGCTGCTCGAACGCTCCGGGGAGCAGCGGGTGGCCATCCCC GCGCTCACCTCGACCGACTACGTGAACACGATCCCGACCGAACTCGAGCCGTGGTTCCCCGGCGACGAGGACGTCGAACG CCGCTACCGGGCCTGGATCCGGTGGAACGCCGCGATCATGGTGCACCGCGCGCAGCGTCCGGGAGTCGGTGTGGGCGGCC ACATCTCGACGTACGCGTCGTCGGCCGCGCTCTACGAGGTGGGCTTCAACCACTTCTTCCGCGGTAAGAGCCACTCCGGC GGCGGCGACCAGGTGTTCATCCAGGGCCACGCCTCCCCCGGGATCTACGCGCGCGCCTATCTCGAGGGCAGGCTGACCGC CGACCAACTCGACGGGTTCCGCCAGGAGCACAGCCACCCCGGCGGCGGTATCCCGTCGTACCCGCATCCGCGGCTGATGC CCGACTTCTGGGAGTTCCCCACGGTCTCGATGGGCCTGGGCCCGATGAACGCGATCTACCAGGCCCGGTTCAACCACTAC CTGCACGACCGCGGCATCAAGGACACCACCGACCAGCATGTGTGGGCGTTCCTCGGCGACGGCGAGATGGACGAACCGGA GAGCCGGGGGCTCATCCACGTGGCCGCCCTCGAGGCGCTGGACAACCTGACGTTCGTCGTCAACTGCAACCTGCAGCGCC TCGACGGCCCGGTGCGCGGCAACGGCAAGATCATCCAGGAACTGGAGTCGTTCTTCCGCGGCGCCGGCTGGAACGTCATC AAGGTGGTGTGGGGCCGCGAATGGGATGCGCTGCTGCACGCCGACCGCGACGGCGCACTGGTCAACCTGATGAACACCAC CCCCGACGGCGACTACCAGACCTACAAGGCCAACGACGGCGGCTACGTACGCGACCACTTCTTCGGCCGTGACCCGCGCA CCAAGGCGCTGGTGGAACCGATGACCGACGCCGAGATCTGGAACCTCAAGCGCGGCGGGCACGACTACCGCAAGGTCTAC GCCGCGTACCGCGCGGCGATGGAGCACAAGGGCCAGCCGACGGTCATCCTCGCCAAGACCATCAAGGGCTACACCCTGGG TAAGCACTTCGAGGGCCGCAACGCCACCCATCAGATGAAAAAGCTTGCGCTGCAAGACCTCAAGGACTTCCGCGACGCCC AGCGCATCCCGATCGGCGATGCCCAGCTCGAGGAGAACCCCTACCTGCCGCCGTACTACCACCCCGGCCCCGAGGCGCCC GAGATCCGCTACATGCTCGACCGCAGGCGCGCGCTCGGCGGTTTCGTGCCGGAGCGTCGCACGAAGTCCAAGGCACTCGC GCTGCCGAGCAGCGATGCCTACAAGGCGCTGAAGAAGGGCTCCGGCAAGCAGGAGGTCGCCACCACGATGGCGACAGTCC GCACCTTCAAGGAGATCCTGCGCGACAAGCAGATCGGCCATCGCATCGTGCCGATCATCCCCGACGAGGCGCGCACGTTC GGGATGGACTCCTGGTTCCCGAACCTCAAGATCTACAACCGCAACGGGCAGCTCTACACCTCCGTCGACGCCGAGCTGAT GCTGGCGTACCGGGAGAGCGAGGTCGGGCAGATCCTGCACGAGGGGATCAACGAGGCCGGTTCGGTGGGCACGTTCATCG CTGCGGGCACGTCGTACGCCACGCACAACGAGCCGATGATCCCGATCTACATCTTCTATTCGATGTTCGGGTTCCAGCGC ACCGGTGACAGCTTCTGGGCGGCCGCCGACCAGATGGCCCGTGGATTCGTGCTGGGCGCGACGGCCGGGCGCACCACGCT GGTCGGTGAGGGGTTGCAGCACGCCGACGGCCACTCACTGCTGCTGGCGTCGACCAACCCCGCGGTGGTGGCCTACGACC CGGCGTTCGCCTACGAGATCGCCTACATCATCGAATCCGGGCTGCACCGGATGTACGGGGAGAACCCGGAGAACGTCTAC TTCTATCTGACGATCTACAACGAGCCCTACGTCCAGCCGGCGGAACCGGAGAACCTCGACGTCGAGGGTCTGTTGCGCGG GATCTACCGGTACCGGGCCGCGGCGGAGAAGAAATCCAACACCGCCCAGATCCTGGTGTCCGGCGTGGCGATGCCCTCGG CGCTCAAGGCCGCCGAGATGCTGGCCGAGGAGTGGGACGTGGCCGCCGACGTGTGGTCGGTGACCAGCTGGAACGAGCTC AACCGCGACGGCGTCCAGGTCGAGAAGGACCTGCTGCGCCATCCGGACCGGCCGGCGGGCACCCCGTACATCACCACGGC GCTCGCCGACGCGGCCGGACCGGTCGTGGCGGTCTCGGACTGGATGCGCGCGGTGCCCGAGCAGATCCGGCCGTGGGTAC CCGGTACGTACATCACGCTCGGCACGGACGGTTTCGGATTCTCCGACACCCGGCCCGCCGCGCGGCGGTTCTACAACACC GACGCCGAGTCGATCACCGTGGCGGTGCTCGAAGGGCTGGCCCGCGACGGCAACATCGACATCTCGGTGGCCGTCGAGGC GGCCCGCCGCTACGAGATCGACGACGTGCTGGCGGCGCCGGAGCAGACCTCCGATCCCGGGGTGGCCTGA
Upstream 100 bases:
>100_bases TGGGGCACGATGGGGGAAGGATGGAGGTTGTCGCGCACGTGGAGAGCCACAAACCCCCCGCGGTCGCGGCGTACCGATAC CGCCTGACAAGGAGCGGAAG
Downstream 100 bases:
>100_bases GTACCTCCCGCGAGCAGACACAGAATCGCGTCCCCGAAGGCGGCCTAACGCGATTCTGTGTCTGCTCGGCACACCCGGCT TGGAGGTATCCGCCAGAACC
Product: pyruvate dehydrogenase subunit E1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 929; Mature: 928
Protein sequence:
>929_residues MTTEFVRQDLAQNSSTAAEHDRVRVIREGVASYLPDIDPDETSEWLESFDQLLERSGPARARYLLLRLLERSGEQRVAIP ALTSTDYVNTIPTELEPWFPGDEDVERRYRAWIRWNAAIMVHRAQRPGVGVGGHISTYASSAALYEVGFNHFFRGKSHSG GGDQVFIQGHASPGIYARAYLEGRLTADQLDGFRQEHSHPGGGIPSYPHPRLMPDFWEFPTVSMGLGPMNAIYQARFNHY LHDRGIKDTTDQHVWAFLGDGEMDEPESRGLIHVAALEALDNLTFVVNCNLQRLDGPVRGNGKIIQELESFFRGAGWNVI KVVWGREWDALLHADRDGALVNLMNTTPDGDYQTYKANDGGYVRDHFFGRDPRTKALVEPMTDAEIWNLKRGGHDYRKVY AAYRAAMEHKGQPTVILAKTIKGYTLGKHFEGRNATHQMKKLALQDLKDFRDAQRIPIGDAQLEENPYLPPYYHPGPEAP EIRYMLDRRRALGGFVPERRTKSKALALPSSDAYKALKKGSGKQEVATTMATVRTFKEILRDKQIGHRIVPIIPDEARTF GMDSWFPNLKIYNRNGQLYTSVDAELMLAYRESEVGQILHEGINEAGSVGTFIAAGTSYATHNEPMIPIYIFYSMFGFQR TGDSFWAAADQMARGFVLGATAGRTTLVGEGLQHADGHSLLLASTNPAVVAYDPAFAYEIAYIIESGLHRMYGENPENVY FYLTIYNEPYVQPAEPENLDVEGLLRGIYRYRAAAEKKSNTAQILVSGVAMPSALKAAEMLAEEWDVAADVWSVTSWNEL NRDGVQVEKDLLRHPDRPAGTPYITTALADAAGPVVAVSDWMRAVPEQIRPWVPGTYITLGTDGFGFSDTRPAARRFYNT DAESITVAVLEGLARDGNIDISVAVEAARRYEIDDVLAAPEQTSDPGVA
Sequences:
>Translated_929_residues MTTEFVRQDLAQNSSTAAEHDRVRVIREGVASYLPDIDPDETSEWLESFDQLLERSGPARARYLLLRLLERSGEQRVAIP ALTSTDYVNTIPTELEPWFPGDEDVERRYRAWIRWNAAIMVHRAQRPGVGVGGHISTYASSAALYEVGFNHFFRGKSHSG GGDQVFIQGHASPGIYARAYLEGRLTADQLDGFRQEHSHPGGGIPSYPHPRLMPDFWEFPTVSMGLGPMNAIYQARFNHY LHDRGIKDTTDQHVWAFLGDGEMDEPESRGLIHVAALEALDNLTFVVNCNLQRLDGPVRGNGKIIQELESFFRGAGWNVI KVVWGREWDALLHADRDGALVNLMNTTPDGDYQTYKANDGGYVRDHFFGRDPRTKALVEPMTDAEIWNLKRGGHDYRKVY AAYRAAMEHKGQPTVILAKTIKGYTLGKHFEGRNATHQMKKLALQDLKDFRDAQRIPIGDAQLEENPYLPPYYHPGPEAP EIRYMLDRRRALGGFVPERRTKSKALALPSSDAYKALKKGSGKQEVATTMATVRTFKEILRDKQIGHRIVPIIPDEARTF GMDSWFPNLKIYNRNGQLYTSVDAELMLAYRESEVGQILHEGINEAGSVGTFIAAGTSYATHNEPMIPIYIFYSMFGFQR TGDSFWAAADQMARGFVLGATAGRTTLVGEGLQHADGHSLLLASTNPAVVAYDPAFAYEIAYIIESGLHRMYGENPENVY FYLTIYNEPYVQPAEPENLDVEGLLRGIYRYRAAAEKKSNTAQILVSGVAMPSALKAAEMLAEEWDVAADVWSVTSWNEL NRDGVQVEKDLLRHPDRPAGTPYITTALADAAGPVVAVSDWMRAVPEQIRPWVPGTYITLGTDGFGFSDTRPAARRFYNT DAESITVAVLEGLARDGNIDISVAVEAARRYEIDDVLAAPEQTSDPGVA >Mature_928_residues TTEFVRQDLAQNSSTAAEHDRVRVIREGVASYLPDIDPDETSEWLESFDQLLERSGPARARYLLLRLLERSGEQRVAIPA LTSTDYVNTIPTELEPWFPGDEDVERRYRAWIRWNAAIMVHRAQRPGVGVGGHISTYASSAALYEVGFNHFFRGKSHSGG GDQVFIQGHASPGIYARAYLEGRLTADQLDGFRQEHSHPGGGIPSYPHPRLMPDFWEFPTVSMGLGPMNAIYQARFNHYL HDRGIKDTTDQHVWAFLGDGEMDEPESRGLIHVAALEALDNLTFVVNCNLQRLDGPVRGNGKIIQELESFFRGAGWNVIK VVWGREWDALLHADRDGALVNLMNTTPDGDYQTYKANDGGYVRDHFFGRDPRTKALVEPMTDAEIWNLKRGGHDYRKVYA AYRAAMEHKGQPTVILAKTIKGYTLGKHFEGRNATHQMKKLALQDLKDFRDAQRIPIGDAQLEENPYLPPYYHPGPEAPE IRYMLDRRRALGGFVPERRTKSKALALPSSDAYKALKKGSGKQEVATTMATVRTFKEILRDKQIGHRIVPIIPDEARTFG MDSWFPNLKIYNRNGQLYTSVDAELMLAYRESEVGQILHEGINEAGSVGTFIAAGTSYATHNEPMIPIYIFYSMFGFQRT GDSFWAAADQMARGFVLGATAGRTTLVGEGLQHADGHSLLLASTNPAVVAYDPAFAYEIAYIIESGLHRMYGENPENVYF YLTIYNEPYVQPAEPENLDVEGLLRGIYRYRAAAEKKSNTAQILVSGVAMPSALKAAEMLAEEWDVAADVWSVTSWNELN RDGVQVEKDLLRHPDRPAGTPYITTALADAAGPVVAVSDWMRAVPEQIRPWVPGTYITLGTDGFGFSDTRPAARRFYNTD AESITVAVLEGLARDGNIDISVAVEAARRYEIDDVLAAPEQTSDPGVA
Specific function: The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components:pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydroge
COG id: COG2609
COG function: function code C; Pyruvate dehydrogenase complex, dehydrogenase (E1) component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786304, Length=882, Percent_Identity=52.0408163265306, Blast_Score=912, Evalue=0.0,
Paralogues:
None
Copy number: 1140 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 400 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004660 - InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005474 [H]
Pfam domain/function: PF00456 Transketolase_N [H]
EC number: =1.2.4.1 [H]
Molecular weight: Translated: 103617; Mature: 103485
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTEFVRQDLAQNSSTAAEHDRVRVIREGVASYLPDIDPDETSEWLESFDQLLERSGPAR CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHH ARYLLLRLLERSGEQRVAIPALTSTDYVNTIPTELEPWFPGDEDVERRYRAWIRWNAAIM HHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEECEEEE VHRAQRPGVGVGGHISTYASSAALYEVGFNHFFRGKSHSGGGDQVFIQGHASPGIYARAY EEECCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEE LEGRLTADQLDGFRQEHSHPGGGIPSYPHPRLMPDFWEFPTVSMGLGPMNAIYQARFNHY EECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCEECCCHHHHHHHHHHHHH LHDRGIKDTTDQHVWAFLGDGEMDEPESRGLIHVAALEALDNLTFVVNCNLQRLDGPVRG HHHCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEHHHHHHCCEEEEEECCHHHCCCCCCC NGKIIQELESFFRGAGWNVIKVVWGREWDALLHADRDGALVNLMNTTPDGDYQTYKANDG CCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHCCCCCCCEEEEECCCCCCCEEEEECCCC GYVRDHFFGRDPRTKALVEPMTDAEIWNLKRGGHDYRKVYAAYRAAMEHKGQPTVILAKT CEEEHHCCCCCCCCHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC IKGYTLGKHFEGRNATHQMKKLALQDLKDFRDAQRIPIGDAQLEENPYLPPYYHPGPEAP CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC EIRYMLDRRRALGGFVPERRTKSKALALPSSDAYKALKKGSGKQEVATTMATVRTFKEIL HHHHHHHHHHHHCCCCCCHHCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RDKQIGHRIVPIIPDEARTFGMDSWFPNLKIYNRNGQLYTSVDAELMLAYRESEVGQILH HHHHCCCEEEEEECCCHHHCCCCCCCCCCEEECCCCCEEEECCCEEEEEHHHHHHHHHHH EGINEAGSVGTFIAAGTSYATHNEPMIPIYIFYSMFGFQRTGDSFWAAADQMARGFVLGA HHHHHCCCCCEEEECCCCCCCCCCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEEC TAGRTTLVGEGLQHADGHSLLLASTNPAVVAYDPAFAYEIAYIIESGLHRMYGENPENVY CCCCCEECCCCCCCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEE FYLTIYNEPYVQPAEPENLDVEGLLRGIYRYRAAAEKKSNTAQILVSGVAMPSALKAAEM EEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEHHCCHHHHHHHHH LAEEWDVAADVWSVTSWNELNRDGVQVEKDLLRHPDRPAGTPYITTALADAAGPVVAVSD HHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEHHH WMRAVPEQIRPWVPGTYITLGTDGFGFSDTRPAARRFYNTDAESITVAVLEGLARDGNID HHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCEE ISVAVEAARRYEIDDVLAAPEQTSDPGVA EEEEEHHHHHCCHHHHHCCCCCCCCCCCC >Mature Secondary Structure TTEFVRQDLAQNSSTAAEHDRVRVIREGVASYLPDIDPDETSEWLESFDQLLERSGPAR CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHH ARYLLLRLLERSGEQRVAIPALTSTDYVNTIPTELEPWFPGDEDVERRYRAWIRWNAAIM HHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEECEEEE VHRAQRPGVGVGGHISTYASSAALYEVGFNHFFRGKSHSGGGDQVFIQGHASPGIYARAY EEECCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEE LEGRLTADQLDGFRQEHSHPGGGIPSYPHPRLMPDFWEFPTVSMGLGPMNAIYQARFNHY EECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCEECCCHHHHHHHHHHHHH LHDRGIKDTTDQHVWAFLGDGEMDEPESRGLIHVAALEALDNLTFVVNCNLQRLDGPVRG HHHCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEHHHHHHCCEEEEEECCHHHCCCCCCC NGKIIQELESFFRGAGWNVIKVVWGREWDALLHADRDGALVNLMNTTPDGDYQTYKANDG CCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHCCCCCCCEEEEECCCCCCCEEEEECCCC GYVRDHFFGRDPRTKALVEPMTDAEIWNLKRGGHDYRKVYAAYRAAMEHKGQPTVILAKT CEEEHHCCCCCCCCHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC IKGYTLGKHFEGRNATHQMKKLALQDLKDFRDAQRIPIGDAQLEENPYLPPYYHPGPEAP CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC EIRYMLDRRRALGGFVPERRTKSKALALPSSDAYKALKKGSGKQEVATTMATVRTFKEIL HHHHHHHHHHHHCCCCCCHHCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RDKQIGHRIVPIIPDEARTFGMDSWFPNLKIYNRNGQLYTSVDAELMLAYRESEVGQILH HHHHCCCEEEEEECCCHHHCCCCCCCCCCEEECCCCCEEEECCCEEEEEHHHHHHHHHHH EGINEAGSVGTFIAAGTSYATHNEPMIPIYIFYSMFGFQRTGDSFWAAADQMARGFVLGA HHHHHCCCCCEEEECCCCCCCCCCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEEC TAGRTTLVGEGLQHADGHSLLLASTNPAVVAYDPAFAYEIAYIIESGLHRMYGENPENVY CCCCCEECCCCCCCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEE FYLTIYNEPYVQPAEPENLDVEGLLRGIYRYRAAAEKKSNTAQILVSGVAMPSALKAAEM EEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEHHCCHHHHHHHHH LAEEWDVAADVWSVTSWNELNRDGVQVEKDLLRHPDRPAGTPYITTALADAAGPVVAVSD HHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEHHH WMRAVPEQIRPWVPGTYITLGTDGFGFSDTRPAARRFYNTDAESITVAVLEGLARDGNID HHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCEE ISVAVEAARRYEIDDVLAAPEQTSDPGVA EEEEEHHHHHCCHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA