| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119869320
Identifier: 119869320
GI number: 119869320
Start: 3445942
End: 3446514
Strand: Direct
Name: 119869320
Synonym: Mkms_3288
Alternate gene names: NA
Gene position: 3445942-3446514 (Clockwise)
Preceding gene: 119869319
Following gene: 119869322
Centisome position: 60.06
GC content: 60.73
Gene sequence:
>573_bases ATGGCGGAACGCGTACCGATGCTCGACCGTGAGCAGGCCCAGCTGCGAGCTGCCGAATGTGGGTTGCCCGAAGAGTTGGC AGACCTGTCGGTATTCCGCGTGGCACTTCATCAGCCGCGTGTGGCGGTTGCGCTGTATGGGCTGCTAGACGCGTTACTCT TCCGCGGTTCCCTTGACGCGCGGCTACGCGAGCTGGTCATCATGCGCATCGGCTGGATTACTGGCTCCGAATACGAATGG ACTCAACATTGGCGAATCGCCACACTGCTCGGCGTGCCTGAGCATGATCTCCTGGCGGTGCGCGACTGGCAGAATTCCGA AAGCCTCGGGCCAGTCGAGCGTGCGGTCCTCGCAGCGACCGATGATGTGGTACGCGACGGGGTCATCTCCGAGGAAAACT GGGCTGGGTGCCAGAAGGCATTCAATAGCGATCACGCCGTTTTGGTCGAACTTGTCGGAGCAATCGCCAATTGGCGGCTC TTTTCGATCCTGCTTCGATCTCTGAATATTCCGCTTGAGTCCGGTACCGACGGCTGGCCGCCCGATGGGCGAGCTCCTCA GGGTTGCGATTGA
Upstream 100 bases:
>100_bases CAGATGAAAGTGCCCGATCAAGTGGGGCGCTGCACAACGTCTTTTTGCCCACGCCCTAACGGCGTGGGCAGAGGTTCAAC AGAGAGGGCCACCCGTGACC
Downstream 100 bases:
>100_bases GCGAAAAACGTGGACCGGTGCTTGACCGAAGCGGTCAGCGCCCCAATCGCCAGACCACGACCCGTGTCGTAGACGGACAA GTCCCCCCTCGGACACCGGT
Product: carboxymuconolactone decarboxylase
Products: NA
Alternate protein names: Alkylhydroperoxidase AhpD Family Core Domain-Containing
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MAERVPMLDREQAQLRAAECGLPEELADLSVFRVALHQPRVAVALYGLLDALLFRGSLDARLRELVIMRIGWITGSEYEW TQHWRIATLLGVPEHDLLAVRDWQNSESLGPVERAVLAATDDVVRDGVISEENWAGCQKAFNSDHAVLVELVGAIANWRL FSILLRSLNIPLESGTDGWPPDGRAPQGCD
Sequences:
>Translated_190_residues MAERVPMLDREQAQLRAAECGLPEELADLSVFRVALHQPRVAVALYGLLDALLFRGSLDARLRELVIMRIGWITGSEYEW TQHWRIATLLGVPEHDLLAVRDWQNSESLGPVERAVLAATDDVVRDGVISEENWAGCQKAFNSDHAVLVELVGAIANWRL FSILLRSLNIPLESGTDGWPPDGRAPQGCD >Mature_189_residues AERVPMLDREQAQLRAAECGLPEELADLSVFRVALHQPRVAVALYGLLDALLFRGSLDARLRELVIMRIGWITGSEYEWT QHWRIATLLGVPEHDLLAVRDWQNSESLGPVERAVLAATDDVVRDGVISEENWAGCQKAFNSDHAVLVELVGAIANWRLF SILLRSLNIPLESGTDGWPPDGRAPQGCD
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21104; Mature: 20973
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAERVPMLDREQAQLRAAECGLPEELADLSVFRVALHQPRVAVALYGLLDALLFRGSLDA CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHH RLRELVIMRIGWITGSEYEWTQHWRIATLLGVPEHDLLAVRDWQNSESLGPVERAVLAAT HHHHHHHHHHHCCCCCCCCHHHHEEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHH DDVVRDGVISEENWAGCQKAFNSDHAVLVELVGAIANWRLFSILLRSLNIPLESGTDGWP HHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PDGRAPQGCD CCCCCCCCCC >Mature Secondary Structure AERVPMLDREQAQLRAAECGLPEELADLSVFRVALHQPRVAVALYGLLDALLFRGSLDA CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHH RLRELVIMRIGWITGSEYEWTQHWRIATLLGVPEHDLLAVRDWQNSESLGPVERAVLAAT HHHHHHHHHHHCCCCCCCCHHHHEEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHH DDVVRDGVISEENWAGCQKAFNSDHAVLVELVGAIANWRLFSILLRSLNIPLESGTDGWP HHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PDGRAPQGCD CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA